RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 TRIM44Q96DX7 344 aaPredicted RBP19.07■□□□□ 0.64
GABARAPL1-208ENST00000540424 CPS1P31327 1500 aa19.07■□□□□ 0.64
GABARAPL1-208ENST00000540424 EXOSC9Q06265 439 aaKnown RBP19.07■□□□□ 0.64
GABARAPL1-208ENST00000540424 BCL2L13Q9BXK5 485 aa19.07■□□□□ 0.64
GABARAPL1-208ENST00000540424 RWDD1Q9H446 243 aaPredicted RBP19.07■□□□□ 0.64
GABARAPL1-208ENST00000540424 CCDC61Q9Y6R9 512 aa19.07■□□□□ 0.64
GABARAPL1-208ENST00000540424 TRAK2O60296 914 aa19.06■□□□□ 0.64
GABARAPL1-208ENST00000540424 MVPQ14764 893 aaKnown RBP19.06■□□□□ 0.64
GABARAPL1-208ENST00000540424 DZIP1LQ8IYY4 767 aaKnown RBP19.06■□□□□ 0.64
GABARAPL1-208ENST00000540424 SMC4Q9NTJ3 1288 aa19.06■□□□□ 0.64
GABARAPL1-208ENST00000540424 AATKQ6ZMQ8 1374 aa19.06■□□□□ 0.64
GABARAPL1-208ENST00000540424 TMEM2Q9UHN6 1383 aa19.06■□□□□ 0.64
GABARAPL1-208ENST00000540424 TXNDC2Q86VQ3 553 aa19.06■□□□□ 0.64
GABARAPL1-208ENST00000540424 TSR2Q969E8 191 aaKnown RBP19.06■□□□□ 0.64
GABARAPL1-208ENST00000540424 NUDT16Q96DE0 195 aaKnown RBP19.06■□□□□ 0.64
GABARAPL1-208ENST00000540424 KIAA1211Q6ZU35 1233 aa19.05■□□□□ 0.64
GABARAPL1-208ENST00000540424 ZNF692Q9BU19 519 aaPredicted RBP19.05■□□□□ 0.64
GABARAPL1-208ENST00000540424 GZF1Q9H116 711 aaPredicted RBP19.05■□□□□ 0.64
GABARAPL1-208ENST00000540424 RLBP1P12271 317 aa19.05■□□□□ 0.64
GABARAPL1-208ENST00000540424 RIMS1Q86UR5 1692 aaKnown RBP19.04■□□□□ 0.64
GABARAPL1-208ENST00000540424 KDM4FA0A1W2PPD8 638 aa19.03■□□□□ 0.64
GABARAPL1-208ENST00000540424 ZNF428Q96B54 188 aa19.03■□□□□ 0.64
GABARAPL1-208ENST00000540424 COG3Q96JB2 828 aa19.03■□□□□ 0.64
GABARAPL1-208ENST00000540424 CDK12Q9NYV4 1490 aaPredicted RBP19.03■□□□□ 0.64
GABARAPL1-208ENST00000540424 LRRC7Q96NW7 1537 aa19.03■□□□□ 0.64
GABARAPL1-208ENST00000540424 IPO8O15397 1037 aaKnown RBP19.02■□□□□ 0.64
GABARAPL1-208ENST00000540424 SEC24BO95487 1268 aa19.02■□□□□ 0.64
GABARAPL1-208ENST00000540424 PRKAR2BP31323 418 aa19.02■□□□□ 0.64
GABARAPL1-208ENST00000540424 SMAP1Q8IYB5 467 aaPredicted RBP19.02■□□□□ 0.64
GABARAPL1-208ENST00000540424 TBC1D2Q9BYX2 928 aa19.02■□□□□ 0.64
GABARAPL1-208ENST00000540424 KIF16BQ96L93 1317 aa19.02■□□□□ 0.64
GABARAPL1-208ENST00000540424 ALDH1L2Q3SY69 923 aa19.01■□□□□ 0.63
GABARAPL1-208ENST00000540424 DDX19BQ9UMR2 479 aa19.01■□□□□ 0.63
GABARAPL1-208ENST00000540424 UBR1Q8IWV7 1749 aa19.01■□□□□ 0.63
GABARAPL1-208ENST00000540424 PCDHB15Q9Y5E8 787 aa19.01■□□□□ 0.63
GABARAPL1-208ENST00000540424 MON2Q7Z3U7 1717 aa19■□□□□ 0.63
GABARAPL1-208ENST00000540424 NFE2L2Q16236 605 aa19■□□□□ 0.63
GABARAPL1-208ENST00000540424 ATF7IPQ6VMQ6 1270 aa19■□□□□ 0.63
GABARAPL1-208ENST00000540424 DDX11L8A8MPP1 907 aa19■□□□□ 0.63
GABARAPL1-208ENST00000540424 OFD1O75665 1012 aa19■□□□□ 0.63
GABARAPL1-208ENST00000540424 SSH1Q8WYL5 1049 aa19■□□□□ 0.63
GABARAPL1-208ENST00000540424 TBC1D32Q96NH3 1257 aa19■□□□□ 0.63
GABARAPL1-208ENST00000540424 UPF2Q9HAU5 1272 aaKnown RBP19■□□□□ 0.63
GABARAPL1-208ENST00000540424 CHMP5Q9NZZ3 219 aa19■□□□□ 0.63
GABARAPL1-208ENST00000540424 NME9Q86XW9 330 aa18.99■□□□□ 0.63
GABARAPL1-208ENST00000540424 TNNQ9UQP3 1299 aa18.99■□□□□ 0.63
GABARAPL1-208ENST00000540424 PLEKHG1Q9ULL1 1385 aa18.99■□□□□ 0.63
GABARAPL1-208ENST00000540424 LMOD3Q0VAK6 560 aa18.99■□□□□ 0.63
GABARAPL1-208ENST00000540424 IL13P35225 146 aa18.98■□□□□ 0.63
GABARAPL1-208ENST00000540424 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.98■□□□□ 0.63
GABARAPL1-208ENST00000540424 MAP2P11137 1827 aaKnown RBP18.98■□□□□ 0.63
GABARAPL1-208ENST00000540424 TRIM27P14373 513 aa18.97■□□□□ 0.63
GABARAPL1-208ENST00000540424 ITSN1Q15811 1721 aa18.97■□□□□ 0.63
GABARAPL1-208ENST00000540424 EMILIN1Q9Y6C2 1016 aa18.96■□□□□ 0.63
GABARAPL1-208ENST00000540424 AKAP12Q02952 1782 aa18.96■□□□□ 0.63
GABARAPL1-208ENST00000540424 NOB1Q9ULX3 412 aaKnown RBP18.96■□□□□ 0.63
GABARAPL1-208ENST00000540424 ADAMTS13Q76LX8 1427 aa18.95■□□□□ 0.62
GABARAPL1-208ENST00000540424 BRPF1P55201 1214 aaPredicted RBP18.95■□□□□ 0.62
GABARAPL1-208ENST00000540424 GNAI1P63096 354 aa18.95■□□□□ 0.62
GABARAPL1-208ENST00000540424 MTERF4Q7Z6M4 381 aaKnown RBP18.95■□□□□ 0.62
GABARAPL1-208ENST00000540424 ITPRIPQ8IWB1 547 aa18.95■□□□□ 0.62
GABARAPL1-208ENST00000540424 CHMP4BQ9H444 224 aaKnown RBP18.95■□□□□ 0.62
GABARAPL1-208ENST00000540424 C3P01024 1663 aa18.94■□□□□ 0.62
GABARAPL1-208ENST00000540424 ROBO2Q9HCK4 1378 aa18.94■□□□□ 0.62
GABARAPL1-208ENST00000540424 HMOX1P09601 288 aa18.94■□□□□ 0.62
GABARAPL1-208ENST00000540424 HDAC1Q13547 482 aaPredicted RBP18.94■□□□□ 0.62
GABARAPL1-208ENST00000540424 IFT57Q9NWB7 429 aa18.94■□□□□ 0.62
GABARAPL1-208ENST00000540424 PDZRN3Q9UPQ7 1066 aa18.94■□□□□ 0.62
GABARAPL1-208ENST00000540424 EID1Q9Y6B2 187 aa18.94■□□□□ 0.62
GABARAPL1-208ENST00000540424 CCDC173Q0VFZ6 552 aa18.93■□□□□ 0.62
GABARAPL1-208ENST00000540424 ZSCAN30Q86W11 494 aa18.93■□□□□ 0.62
GABARAPL1-208ENST00000540424 FBLN1P23142 703 aa18.92■□□□□ 0.62
GABARAPL1-208ENST00000540424 PHACTR3Q96KR7 559 aa18.91■□□□□ 0.62
GABARAPL1-208ENST00000540424 PPP1R9BQ96SB3 815 aa18.91■□□□□ 0.62
GABARAPL1-208ENST00000540424 PRR36Q9H6K5 1346 aa18.91■□□□□ 0.62
GABARAPL1-208ENST00000540424 PLEKHG3A1L390 1219 aa18.91■□□□□ 0.62
GABARAPL1-208ENST00000540424 PDE4CQ08493 712 aa18.91■□□□□ 0.62
GABARAPL1-208ENST00000540424 ZRANB1Q9UGI0 708 aa18.9■□□□□ 0.62
GABARAPL1-208ENST00000540424 ARHGAP45Q92619 1136 aa18.9■□□□□ 0.62
GABARAPL1-208ENST00000540424 UTP14CQ5TAP6 766 aaKnown RBP18.89■□□□□ 0.61
GABARAPL1-208ENST00000540424 NCKAP5LQ9HCH0 1330 aa18.89■□□□□ 0.61
GABARAPL1-208ENST00000540424 TMEM57Q8N5G2 664 aa18.89■□□□□ 0.61
GABARAPL1-208ENST00000540424 TTC21BQ7Z4L5 1316 aa18.89■□□□□ 0.61
GABARAPL1-208ENST00000540424 RRS1Q15050 365 aaKnown RBP18.88■□□□□ 0.61
GABARAPL1-208ENST00000540424 TOPAZ1Q8N9V7 1692 aa18.88■□□□□ 0.61
GABARAPL1-208ENST00000540424 LTKP29376 864 aa18.88■□□□□ 0.61
GABARAPL1-208ENST00000540424 ZBTB40Q9NUA8 1239 aa18.88■□□□□ 0.61
GABARAPL1-208ENST00000540424 ACEP12821 1306 aa18.87■□□□□ 0.61
GABARAPL1-208ENST00000540424 ZNF853P0CG23 659 aa18.87■□□□□ 0.61
GABARAPL1-208ENST00000540424 PTMSP20962 102 aa18.87■□□□□ 0.61
GABARAPL1-208ENST00000540424 CFAP44Q96MT7 982 aa18.87■□□□□ 0.61
GABARAPL1-208ENST00000540424 NRKQ7Z2Y5 1582 aa18.87■□□□□ 0.61
GABARAPL1-208ENST00000540424 SLIT1O75093 1534 aa18.86■□□□□ 0.61
GABARAPL1-208ENST00000540424 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.86■□□□□ 0.61
GABARAPL1-208ENST00000540424 VAMP4O75379 141 aa18.86■□□□□ 0.61
GABARAPL1-208ENST00000540424 HAP1P54257 671 aaPredicted RBP18.86■□□□□ 0.61
GABARAPL1-208ENST00000540424 SKOR2Q2VWA4 1001 aaPredicted RBP18.86■□□□□ 0.61
GABARAPL1-208ENST00000540424 GAS2L3Q86XJ1 694 aa18.86■□□□□ 0.61
GABARAPL1-208ENST00000540424 FAM13BQ9NYF5 915 aa18.86■□□□□ 0.61
GABARAPL1-208ENST00000540424 USP6P35125 1406 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms