RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 COL22A1Q8NFW1 1626 aaPredicted RBP23.86■■□□□ 1.41
COPS7A-210ENST00000539735 MED1Q15648 1581 aaPredicted RBP23.86■■□□□ 1.41
COPS7A-210ENST00000539735 ALS2Q96Q42 1657 aa23.85■■□□□ 1.41
COPS7A-210ENST00000539735 NGLY1Q96IV0 654 aa23.84■■□□□ 1.41
COPS7A-210ENST00000539735 KIF20BQ96Q89 1820 aa23.83■■□□□ 1.41
COPS7A-210ENST00000539735 AKAP12Q02952 1782 aa23.83■■□□□ 1.41
COPS7A-210ENST00000539735 ZRANB1Q9UGI0 708 aa23.83■■□□□ 1.41
COPS7A-210ENST00000539735 APAF1O14727 1248 aa23.82■■□□□ 1.4
COPS7A-210ENST00000539735 SLFN5Q08AF3 891 aa23.82■■□□□ 1.4
COPS7A-210ENST00000539735 GCP02774 474 aa23.81■■□□□ 1.4
COPS7A-210ENST00000539735 TRMT2AQ8IZ69 625 aaKnown RBP23.81■■□□□ 1.4
COPS7A-210ENST00000539735 USP19O94966 1318 aa23.81■■□□□ 1.4
COPS7A-210ENST00000539735 SOX12O15370 315 aa23.8■■□□□ 1.4
COPS7A-210ENST00000539735 ZC3H6P61129 1189 aaKnown RBP23.8■■□□□ 1.4
COPS7A-210ENST00000539735 MON2Q7Z3U7 1717 aa23.8■■□□□ 1.4
COPS7A-210ENST00000539735 NRKQ7Z2Y5 1582 aa23.79■■□□□ 1.4
COPS7A-210ENST00000539735 TCERG1O14776 1098 aaKnown RBP23.78■■□□□ 1.4
COPS7A-210ENST00000539735 PLIN1O60240 522 aa23.77■■□□□ 1.4
COPS7A-210ENST00000539735 COG3Q96JB2 828 aa23.77■■□□□ 1.4
COPS7A-210ENST00000539735 CRBNQ96SW2 442 aa23.77■■□□□ 1.4
COPS7A-210ENST00000539735 PRDM11Q9NQV5 511 aa23.77■■□□□ 1.4
COPS7A-210ENST00000539735 AFF2P51816 1311 aa23.76■■□□□ 1.39
COPS7A-210ENST00000539735 PIK3C2AO00443 1686 aa23.76■■□□□ 1.39
COPS7A-210ENST00000539735 FAM83GA6ND36 823 aa23.76■■□□□ 1.39
COPS7A-210ENST00000539735 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.76■■□□□ 1.39
COPS7A-210ENST00000539735 KCNH5Q8NCM2 988 aa23.76■■□□□ 1.39
COPS7A-210ENST00000539735 USP31Q70CQ4 1352 aa23.76■■□□□ 1.39
COPS7A-210ENST00000539735 KIAA0232Q92628 1395 aa23.75■■□□□ 1.39
COPS7A-210ENST00000539735 ZBTB7CA1YPR0 619 aa23.75■■□□□ 1.39
COPS7A-210ENST00000539735 E9PSI1 815 aa23.75■■□□□ 1.39
COPS7A-210ENST00000539735 RUNDC1Q96C34 613 aa23.74■■□□□ 1.39
COPS7A-210ENST00000539735 CHRNA2Q15822 529 aa23.73■■□□□ 1.39
COPS7A-210ENST00000539735 RGS17Q9UGC6 210 aaPredicted RBP23.73■■□□□ 1.39
COPS7A-210ENST00000539735 U2AF1L5P0DN76 240 aaPredicted RBP23.72■■□□□ 1.39
COPS7A-210ENST00000539735 MS4A1P11836 297 aa23.72■■□□□ 1.39
COPS7A-210ENST00000539735 U2AF1Q01081 240 aaKnown RBP eCLIP23.72■■□□□ 1.39
COPS7A-210ENST00000539735 ZNF772Q68DY9 489 aaPredicted RBP23.72■■□□□ 1.39
COPS7A-210ENST00000539735 ERICH6Q7L0X2 663 aa23.72■■□□□ 1.39
COPS7A-210ENST00000539735 FNBP4Q8N3X1 1017 aaPredicted RBP23.72■■□□□ 1.39
COPS7A-210ENST00000539735 USP21Q9UK80 565 aa23.72■■□□□ 1.39
COPS7A-210ENST00000539735 COL3A1P02461 1466 aaPredicted RBP23.71■■□□□ 1.39
COPS7A-210ENST00000539735 FBLN1P23142 703 aa23.7■■□□□ 1.38
COPS7A-210ENST00000539735 OVOS2A0A0J9YW53 1432 aa23.7■■□□□ 1.38
COPS7A-210ENST00000539735 OVOS2Q6IE36 1432 aa23.7■■□□□ 1.38
COPS7A-210ENST00000539735 BTG4Q9NY30 223 aa23.69■■□□□ 1.38
COPS7A-210ENST00000539735 ABCA3Q99758 1704 aa23.69■■□□□ 1.38
COPS7A-210ENST00000539735 SLIT3O75094 1523 aa23.69■■□□□ 1.38
COPS7A-210ENST00000539735 U2SURPO15042 1029 aaKnown RBP23.68■■□□□ 1.38
COPS7A-210ENST00000539735 CPDO75976 1380 aa23.68■■□□□ 1.38
COPS7A-210ENST00000539735 TCP11L2Q8N4U5 519 aa23.68■■□□□ 1.38
COPS7A-210ENST00000539735 PHRF1Q9P1Y6 1649 aaKnown RBP23.67■■□□□ 1.38
COPS7A-210ENST00000539735 C20orf194Q5TEA3 1177 aa23.67■■□□□ 1.38
COPS7A-210ENST00000539735 POLKQ9UBT6 870 aa23.67■■□□□ 1.38
COPS7A-210ENST00000539735 CRYBG1Q9Y4K1 1723 aa23.67■■□□□ 1.38
COPS7A-210ENST00000539735 PPM1GO15355 546 aaPredicted RBP23.66■■□□□ 1.38
COPS7A-210ENST00000539735 NEUROD2Q15784 382 aa23.66■■□□□ 1.38
COPS7A-210ENST00000539735 ARHGEF25Q86VW2 580 aa23.66■■□□□ 1.38
COPS7A-210ENST00000539735 UNC5CLQ8IV45 518 aa23.66■■□□□ 1.38
COPS7A-210ENST00000539735 RRP7AQ9Y3A4 280 aaKnown RBP23.66■■□□□ 1.38
COPS7A-210ENST00000539735 DIAPH1O60610 1272 aaKnown RBP23.66■■□□□ 1.38
COPS7A-210ENST00000539735 ANP32AP39687 249 aaKnown RBP23.66■■□□□ 1.38
COPS7A-210ENST00000539735 QTRT2Q9H974 415 aaKnown RBP23.66■■□□□ 1.38
COPS7A-210ENST00000539735 SPINK5Q9NQ38 1064 aaPredicted RBP23.66■■□□□ 1.38
COPS7A-210ENST00000539735 NCBP3Q53F19 620 aaKnown RBP23.65■■□□□ 1.38
COPS7A-210ENST00000539735 POTEAQ6S8J7 498 aa23.65■■□□□ 1.38
COPS7A-210ENST00000539735 WWC1Q8IX03 1113 aa23.64■■□□□ 1.38
COPS7A-210ENST00000539735 SLIT2O94813 1529 aa23.64■■□□□ 1.37
COPS7A-210ENST00000539735 BCL9LQ86UU0 1499 aa23.64■■□□□ 1.37
COPS7A-210ENST00000539735 KDM2BQ8NHM5 1336 aa23.63■■□□□ 1.37
COPS7A-210ENST00000539735 STRN4Q9NRL3 753 aa23.62■■□□□ 1.37
COPS7A-210ENST00000539735 TRPC5Q9UL62 973 aaPredicted RBP23.62■■□□□ 1.37
COPS7A-210ENST00000539735 MAP2P11137 1827 aaKnown RBP23.62■■□□□ 1.37
COPS7A-210ENST00000539735 EVA1CP58658 441 aa23.61■■□□□ 1.37
COPS7A-210ENST00000539735 EMILIN1Q9Y6C2 1016 aa23.61■■□□□ 1.37
COPS7A-210ENST00000539735 AATKQ6ZMQ8 1374 aa23.61■■□□□ 1.37
COPS7A-210ENST00000539735 NFAT5O94916 1531 aa23.61■■□□□ 1.37
COPS7A-210ENST00000539735 MARF1Q9Y4F3 1742 aaKnown RBP23.61■■□□□ 1.37
COPS7A-210ENST00000539735 CENPQQ7L2Z9 268 aaPredicted RBP23.61■■□□□ 1.37
COPS7A-210ENST00000539735 CCDC9Q9Y3X0 531 aaKnown RBP23.61■■□□□ 1.37
COPS7A-210ENST00000539735 RRS1Q15050 365 aaKnown RBP23.6■■□□□ 1.37
COPS7A-210ENST00000539735 AXIN2Q9Y2T1 843 aa23.6■■□□□ 1.37
COPS7A-210ENST00000539735 CCDC27Q2M243 656 aa23.59■■□□□ 1.37
COPS7A-210ENST00000539735 NOP58Q9Y2X3 529 aaKnown RBP23.59■■□□□ 1.37
COPS7A-210ENST00000539735 MAP3K19Q56UN5 1328 aa23.58■■□□□ 1.37
COPS7A-210ENST00000539735 COL14A1Q05707 1796 aaKnown RBP23.58■■□□□ 1.37
COPS7A-210ENST00000539735 PDE4AP27815 886 aa23.58■■□□□ 1.37
COPS7A-210ENST00000539735 AMPHP49418 695 aa23.58■■□□□ 1.37
COPS7A-210ENST00000539735 IPO9Q96P70 1041 aaKnown RBP23.58■■□□□ 1.37
COPS7A-210ENST00000539735 PLEKHF1Q96S99 279 aa23.58■■□□□ 1.37
COPS7A-210ENST00000539735 USP54Q70EL1 1684 aa23.57■■□□□ 1.36
COPS7A-210ENST00000539735 RXRBP28702 533 aa23.57■■□□□ 1.36
COPS7A-210ENST00000539735 BACH2Q9BYV9 841 aa23.57■■□□□ 1.36
COPS7A-210ENST00000539735 WDR63Q8IWG1 891 aa23.56■■□□□ 1.36
COPS7A-210ENST00000539735 VPS72Q15906 364 aa23.56■■□□□ 1.36
COPS7A-210ENST00000539735 CAMTA1Q9Y6Y1 1673 aa23.55■■□□□ 1.36
COPS7A-210ENST00000539735 GJD4Q96KN9 370 aaPredicted RBP23.55■■□□□ 1.36
COPS7A-210ENST00000539735 MAPK8IP3Q9UPT6 1336 aa23.55■■□□□ 1.36
COPS7A-210ENST00000539735 ATRNO75882 1429 aa23.55■■□□□ 1.36
COPS7A-210ENST00000539735 CDK12Q9NYV4 1490 aaPredicted RBP23.55■■□□□ 1.36
COPS7A-210ENST00000539735 RBM6P78332 1123 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms