RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 ZNF428Q96B54 188 aa14.63□□□□□ -0.07
SLC28A1-204ENST00000538177 SSH2Q76I76 1423 aa14.63□□□□□ -0.07
SLC28A1-204ENST00000538177 RGS3P49796 1198 aa14.63□□□□□ -0.07
SLC28A1-204ENST00000538177 ALDH1L2Q3SY69 923 aa14.63□□□□□ -0.07
SLC28A1-204ENST00000538177 TRIM27P14373 513 aa14.62□□□□□ -0.07
SLC28A1-204ENST00000538177 ATF7IPQ6VMQ6 1270 aa14.62□□□□□ -0.07
SLC28A1-204ENST00000538177 BRPF1P55201 1214 aaPredicted RBP14.61□□□□□ -0.07
SLC28A1-204ENST00000538177 FTSJ3Q8IY81 847 aaKnown RBP14.61□□□□□ -0.07
SLC28A1-204ENST00000538177 USP31Q70CQ4 1352 aa14.61□□□□□ -0.07
SLC28A1-204ENST00000538177 ZNF853P0CG23 659 aa14.61□□□□□ -0.07
SLC28A1-204ENST00000538177 IFT57Q9NWB7 429 aa14.61□□□□□ -0.07
SLC28A1-204ENST00000538177 NUTM2FA1L443 756 aa14.6□□□□□ -0.07
SLC28A1-204ENST00000538177 LMOD3Q0VAK6 560 aa14.6□□□□□ -0.07
SLC28A1-204ENST00000538177 PLPPR3Q6T4P5 718 aa14.6□□□□□ -0.07
SLC28A1-204ENST00000538177 RWDD1Q9H446 243 aaPredicted RBP14.6□□□□□ -0.07
SLC28A1-204ENST00000538177 NOB1Q9ULX3 412 aaKnown RBP14.6□□□□□ -0.07
SLC28A1-204ENST00000538177 KIF16BQ96L93 1317 aa14.6□□□□□ -0.07
SLC28A1-204ENST00000538177 IPO8O15397 1037 aaKnown RBP14.6□□□□□ -0.07
SLC28A1-204ENST00000538177 GNAI1P63096 354 aa14.6□□□□□ -0.07
SLC28A1-204ENST00000538177 TTC21AQ8NDW8 1320 aa14.59□□□□□ -0.07
SLC28A1-204ENST00000538177 EIF4A2Q14240 407 aaKnown RBP14.59□□□□□ -0.07
SLC28A1-204ENST00000538177 DDX19BQ9UMR2 479 aa14.58□□□□□ -0.07
SLC28A1-204ENST00000538177 NALCNQ8IZF0 1738 aa14.58□□□□□ -0.08
SLC28A1-204ENST00000538177 TRHP20396 242 aaPredicted RBP14.58□□□□□ -0.08
SLC28A1-204ENST00000538177 THUMPD2Q9BTF0 503 aaKnown RBP14.58□□□□□ -0.08
SLC28A1-204ENST00000538177 PIK3R4Q99570 1358 aa14.58□□□□□ -0.08
SLC28A1-204ENST00000538177 XRN1Q8IZH2 1706 aaKnown RBP14.58□□□□□ -0.08
SLC28A1-204ENST00000538177 VAMP4O75379 141 aa14.57□□□□□ -0.08
SLC28A1-204ENST00000538177 DDRGK1Q96HY6 314 aa14.57□□□□□ -0.08
SLC28A1-204ENST00000538177 LAS1LQ9Y4W2 734 aaKnown RBP14.57□□□□□ -0.08
SLC28A1-204ENST00000538177 CFAP44Q96MT7 982 aa14.56□□□□□ -0.08
SLC28A1-204ENST00000538177 MBIPQ9NS73 344 aa14.56□□□□□ -0.08
SLC28A1-204ENST00000538177 HDAC1Q13547 482 aaPredicted RBP14.55□□□□□ -0.08
SLC28A1-204ENST00000538177 ANKARQ7Z5J8 1434 aa14.55□□□□□ -0.08
SLC28A1-204ENST00000538177 ITPRIPQ8IWB1 547 aa14.55□□□□□ -0.08
SLC28A1-204ENST00000538177 TMEM57Q8N5G2 664 aa14.55□□□□□ -0.08
SLC28A1-204ENST00000538177 PDZRN3Q9UPQ7 1066 aa14.55□□□□□ -0.08
SLC28A1-204ENST00000538177 CEP170BQ9Y4F5 1589 aaPredicted RBP14.54□□□□□ -0.08
SLC28A1-204ENST00000538177 DLG5Q8TDM6 1919 aa14.54□□□□□ -0.08
SLC28A1-204ENST00000538177 KCNA6P17658 529 aa14.54□□□□□ -0.08
SLC28A1-204ENST00000538177 SULT6B1Q6IMI4 303 aa14.54□□□□□ -0.08
SLC28A1-204ENST00000538177 AEBP1Q8IUX7 1158 aa14.54□□□□□ -0.08
SLC28A1-204ENST00000538177 NGDNQ8NEJ9 315 aaKnown RBP14.54□□□□□ -0.08
SLC28A1-204ENST00000538177 ARHGAP45Q92619 1136 aa14.54□□□□□ -0.08
SLC28A1-204ENST00000538177 HSP90AB2PQ58FF8 381 aa14.54□□□□□ -0.08
SLC28A1-204ENST00000538177 MRPL50Q8N5N7 158 aaKnown RBP14.54□□□□□ -0.08
SLC28A1-204ENST00000538177 ZBTB40Q9NUA8 1239 aa14.54□□□□□ -0.08
SLC28A1-204ENST00000538177 PEAK1Q9H792 1746 aa14.54□□□□□ -0.08
SLC28A1-204ENST00000538177 TSPYL6Q8N831 410 aa14.53□□□□□ -0.08
SLC28A1-204ENST00000538177 FAM83GA6ND36 823 aa14.52□□□□□ -0.08
SLC28A1-204ENST00000538177 RIMS1Q86UR5 1692 aaKnown RBP14.52□□□□□ -0.09
SLC28A1-204ENST00000538177 MAP3K19Q56UN5 1328 aa14.52□□□□□ -0.09
SLC28A1-204ENST00000538177 RGPD1P0DJD0 1748 aa14.52□□□□□ -0.09
SLC28A1-204ENST00000538177 TWISTNBQ3B726 338 aaPredicted RBP14.51□□□□□ -0.09
SLC28A1-204ENST00000538177 SBNO1A3KN83 1393 aa14.51□□□□□ -0.09
SLC28A1-204ENST00000538177 ARHGEF10O15013 1369 aa14.51□□□□□ -0.09
SLC28A1-204ENST00000538177 RGPD8O14715 1765 aaPredicted RBP14.51□□□□□ -0.09
SLC28A1-204ENST00000538177 C8orf58Q8NAV2 365 aa14.5□□□□□ -0.09
SLC28A1-204ENST00000538177 FLT4P35916 1363 aa14.5□□□□□ -0.09
SLC28A1-204ENST00000538177 DCTN1Q14203 1278 aa14.5□□□□□ -0.09
SLC28A1-204ENST00000538177 VIRMAQ69YN4 1812 aaKnown RBP14.49□□□□□ -0.09
SLC28A1-204ENST00000538177 ANKLE2Q86XL3 938 aa14.49□□□□□ -0.09
SLC28A1-204ENST00000538177 SMC5Q8IY18 1101 aa14.49□□□□□ -0.09
SLC28A1-204ENST00000538177 CHL1O00533 1208 aa14.49□□□□□ -0.09
SLC28A1-204ENST00000538177 FMN2Q9NZ56 1722 aa14.48□□□□□ -0.09
SLC28A1-204ENST00000538177 ELL2O00472 640 aaPredicted RBP14.48□□□□□ -0.09
SLC28A1-204ENST00000538177 CHMP4BQ9H444 224 aaKnown RBP14.48□□□□□ -0.09
SLC28A1-204ENST00000538177 PIK3C2AO00443 1686 aa14.48□□□□□ -0.09
SLC28A1-204ENST00000538177 USP19O94966 1318 aa14.47□□□□□ -0.09
SLC28A1-204ENST00000538177 SOX12O15370 315 aa14.47□□□□□ -0.09
SLC28A1-204ENST00000538177 KDRP35968 1356 aa14.47□□□□□ -0.09
SLC28A1-204ENST00000538177 ABCC4O15439 1325 aa14.47□□□□□ -0.09
SLC28A1-204ENST00000538177 ZBTB7BO15156 539 aaPredicted RBP14.47□□□□□ -0.09
SLC28A1-204ENST00000538177 KIF24Q5T7B8 1368 aa14.46□□□□□ -0.09
SLC28A1-204ENST00000538177 NLRP6P59044 892 aa14.46□□□□□ -0.09
SLC28A1-204ENST00000538177 AMPHP49418 695 aa14.46□□□□□ -0.1
SLC28A1-204ENST00000538177 HAP1P54257 671 aaPredicted RBP14.46□□□□□ -0.1
SLC28A1-204ENST00000538177 API5Q9BZZ5 524 aaKnown RBP14.46□□□□□ -0.1
SLC28A1-204ENST00000538177 KIAA0232Q92628 1395 aa14.45□□□□□ -0.1
SLC28A1-204ENST00000538177 ZNF142P52746 1687 aaPredicted RBP14.45□□□□□ -0.1
SLC28A1-204ENST00000538177 CHD2O14647 1828 aaKnown RBP14.45□□□□□ -0.1
SLC28A1-204ENST00000538177 IGSF1Q8N6C5 1336 aa14.45□□□□□ -0.1
SLC28A1-204ENST00000538177 CRB1P82279 1406 aa14.44□□□□□ -0.1
SLC28A1-204ENST00000538177 SEC24BO95487 1268 aa14.44□□□□□ -0.1
SLC28A1-204ENST00000538177 MCM10Q7L590 875 aa14.44□□□□□ -0.1
SLC28A1-204ENST00000538177 EYA1Q99502 592 aa14.44□□□□□ -0.1
SLC28A1-204ENST00000538177 USP54Q70EL1 1684 aa14.44□□□□□ -0.1
SLC28A1-204ENST00000538177 ADAMTSL3P82987 1691 aa14.44□□□□□ -0.1
SLC28A1-204ENST00000538177 NBR1Q14596 966 aa14.43□□□□□ -0.1
SLC28A1-204ENST00000538177 MTHFSDQ2M296 383 aaKnown RBP14.43□□□□□ -0.1
SLC28A1-204ENST00000538177 SETD1BQ9UPS6 1966 aaKnown RBP14.43□□□□□ -0.1
SLC28A1-204ENST00000538177 PHF8Q9UPP1 1060 aa14.43□□□□□ -0.1
SLC28A1-204ENST00000538177 NUCB1Q02818 461 aa14.42□□□□□ -0.1
SLC28A1-204ENST00000538177 MARF1Q9Y4F3 1742 aaKnown RBP14.42□□□□□ -0.1
SLC28A1-204ENST00000538177 HOXC9P31274 260 aa14.41□□□□□ -0.1
SLC28A1-204ENST00000538177 ABTB2Q8N961 1025 aa14.41□□□□□ -0.1
SLC28A1-204ENST00000538177 GAS2L2Q8NHY3 880 aa14.41□□□□□ -0.1
SLC28A1-204ENST00000538177 HTATSF1O43719 755 aaKnown RBP14.41□□□□□ -0.1
SLC28A1-204ENST00000538177 DAXXQ9UER7 740 aaPredicted RBP14.41□□□□□ -0.1
SLC28A1-204ENST00000538177 FOXO3O43524 673 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms