RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 ZKSCAN2Q63HK3 967 aa11.98□□□□□ -0.49
PTPRR-205ENST00000537619 DZIP1LQ8IYY4 767 aaKnown RBP11.98□□□□□ -0.49
PTPRR-205ENST00000537619 FAM161AQ3B820 660 aa11.97□□□□□ -0.49
PTPRR-205ENST00000537619 USP31Q70CQ4 1352 aa11.96□□□□□ -0.49
PTPRR-205ENST00000537619 DLG5Q8TDM6 1919 aa11.96□□□□□ -0.49
PTPRR-205ENST00000537619 EIF4A2Q14240 407 aaKnown RBP11.96□□□□□ -0.49
PTPRR-205ENST00000537619 AEBP1Q8IUX7 1158 aa11.96□□□□□ -0.49
PTPRR-205ENST00000537619 NOB1Q9ULX3 412 aaKnown RBP11.96□□□□□ -0.49
PTPRR-205ENST00000537619 ZNF853P0CG23 659 aa11.96□□□□□ -0.5
PTPRR-205ENST00000537619 CEP170BQ9Y4F5 1589 aaPredicted RBP11.95□□□□□ -0.5
PTPRR-205ENST00000537619 AAMPQ13685 434 aa11.95□□□□□ -0.5
PTPRR-205ENST00000537619 ATF7IPQ6VMQ6 1270 aa11.95□□□□□ -0.5
PTPRR-205ENST00000537619 THEMISQ8N1K5 641 aaPredicted RBP11.95□□□□□ -0.5
PTPRR-205ENST00000537619 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
PTPRR-205ENST00000537619 RGPD8O14715 1765 aaPredicted RBP11.95□□□□□ -0.5
PTPRR-205ENST00000537619 RGPD1P0DJD0 1748 aa11.95□□□□□ -0.5
PTPRR-205ENST00000537619 TSPYL6Q8N831 410 aa11.94□□□□□ -0.5
PTPRR-205ENST00000537619 ZBTB47Q9UFB7 747 aaPredicted RBP11.94□□□□□ -0.5
PTPRR-205ENST00000537619 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
PTPRR-205ENST00000537619 FAM83GA6ND36 823 aa11.94□□□□□ -0.5
PTPRR-205ENST00000537619 TRHP20396 242 aaPredicted RBP11.94□□□□□ -0.5
PTPRR-205ENST00000537619 FTSJ3Q8IY81 847 aaKnown RBP11.94□□□□□ -0.5
PTPRR-205ENST00000537619 TMEM57Q8N5G2 664 aa11.94□□□□□ -0.5
PTPRR-205ENST00000537619 KCNA6P17658 529 aa11.93□□□□□ -0.5
PTPRR-205ENST00000537619 DCTN1Q14203 1278 aa11.93□□□□□ -0.5
PTPRR-205ENST00000537619 MBIPQ9NS73 344 aa11.93□□□□□ -0.5
PTPRR-205ENST00000537619 IFT57Q9NWB7 429 aa11.93□□□□□ -0.5
PTPRR-205ENST00000537619 PDZRN3Q9UPQ7 1066 aa11.93□□□□□ -0.5
PTPRR-205ENST00000537619 PIK3C2AO00443 1686 aa11.93□□□□□ -0.5
PTPRR-205ENST00000537619 RIMS1Q86UR5 1692 aaKnown RBP11.93□□□□□ -0.5
PTPRR-205ENST00000537619 VAMP4O75379 141 aa11.92□□□□□ -0.5
PTPRR-205ENST00000537619 NEFMP07197 916 aa11.92□□□□□ -0.5
PTPRR-205ENST00000537619 ALDH1L2Q3SY69 923 aa11.92□□□□□ -0.5
PTPRR-205ENST00000537619 HSP90AB2PQ58FF8 381 aa11.92□□□□□ -0.5
PTPRR-205ENST00000537619 VIRMAQ69YN4 1812 aaKnown RBP11.92□□□□□ -0.5
PTPRR-205ENST00000537619 SULT6B1Q6IMI4 303 aa11.92□□□□□ -0.5
PTPRR-205ENST00000537619 KIF16BQ96L93 1317 aa11.91□□□□□ -0.5
PTPRR-205ENST00000537619 SOX12O15370 315 aa11.91□□□□□ -0.5
PTPRR-205ENST00000537619 BRPF1P55201 1214 aaPredicted RBP11.91□□□□□ -0.5
PTPRR-205ENST00000537619 ITPRIPQ8IWB1 547 aa11.91□□□□□ -0.5
PTPRR-205ENST00000537619 MRPL50Q8N5N7 158 aaKnown RBP11.91□□□□□ -0.5
PTPRR-205ENST00000537619 FMN2Q9NZ56 1722 aa11.91□□□□□ -0.5
PTPRR-205ENST00000537619 MARF1Q9Y4F3 1742 aaKnown RBP11.91□□□□□ -0.5
PTPRR-205ENST00000537619 MAP3K19Q56UN5 1328 aa11.91□□□□□ -0.5
PTPRR-205ENST00000537619 TTC21AQ8NDW8 1320 aa11.91□□□□□ -0.5
PTPRR-205ENST00000537619 USP19O94966 1318 aa11.9□□□□□ -0.5
PTPRR-205ENST00000537619 GNAI1P63096 354 aa11.9□□□□□ -0.51
PTPRR-205ENST00000537619 C8orf58Q8NAV2 365 aa11.9□□□□□ -0.51
PTPRR-205ENST00000537619 ANKARQ7Z5J8 1434 aa11.89□□□□□ -0.51
PTPRR-205ENST00000537619 SEC24BO95487 1268 aa11.89□□□□□ -0.51
PTPRR-205ENST00000537619 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
PTPRR-205ENST00000537619 RWDD1Q9H446 243 aaPredicted RBP11.89□□□□□ -0.51
PTPRR-205ENST00000537619 ZBTB40Q9NUA8 1239 aa11.89□□□□□ -0.51
PTPRR-205ENST00000537619 DDX19BQ9UMR2 479 aa11.89□□□□□ -0.51
PTPRR-205ENST00000537619 PIK3R4Q99570 1358 aa11.88□□□□□ -0.51
PTPRR-205ENST00000537619 CALD1Q05682 793 aaKnown RBP11.88□□□□□ -0.51
PTPRR-205ENST00000537619 ZNF142P52746 1687 aaPredicted RBP11.88□□□□□ -0.51
PTPRR-205ENST00000537619 ARHGEF10O15013 1369 aa11.88□□□□□ -0.51
PTPRR-205ENST00000537619 ELL2O00472 640 aaPredicted RBP11.88□□□□□ -0.51
PTPRR-205ENST00000537619 LMOD3Q0VAK6 560 aa11.88□□□□□ -0.51
PTPRR-205ENST00000537619 HDAC1Q13547 482 aaPredicted RBP11.88□□□□□ -0.51
PTPRR-205ENST00000537619 NGDNQ8NEJ9 315 aaKnown RBP11.88□□□□□ -0.51
PTPRR-205ENST00000537619 SBNO1A3KN83 1393 aa11.87□□□□□ -0.51
PTPRR-205ENST00000537619 NBR1Q14596 966 aa11.87□□□□□ -0.51
PTPRR-205ENST00000537619 ZNF428Q96B54 188 aa11.87□□□□□ -0.51
PTPRR-205ENST00000537619 ADAMTSL3P82987 1691 aa11.86□□□□□ -0.51
PTPRR-205ENST00000537619 USP54Q70EL1 1684 aa11.86□□□□□ -0.51
PTPRR-205ENST00000537619 IPO8O15397 1037 aaKnown RBP11.86□□□□□ -0.51
PTPRR-205ENST00000537619 KRT24Q2M2I5 525 aa11.86□□□□□ -0.51
PTPRR-205ENST00000537619 TWISTNBQ3B726 338 aaPredicted RBP11.86□□□□□ -0.51
PTPRR-205ENST00000537619 FLT4P35916 1363 aa11.86□□□□□ -0.51
PTPRR-205ENST00000537619 MCM10Q7L590 875 aa11.86□□□□□ -0.51
PTPRR-205ENST00000537619 CHD2O14647 1828 aaKnown RBP11.86□□□□□ -0.51
PTPRR-205ENST00000537619 NWD1Q149M9 1564 aa11.85□□□□□ -0.51
PTPRR-205ENST00000537619 ABCC4O15439 1325 aa11.85□□□□□ -0.51
PTPRR-205ENST00000537619 CRB1P82279 1406 aa11.85□□□□□ -0.51
PTPRR-205ENST00000537619 SLC4A3P48751 1232 aa11.85□□□□□ -0.51
PTPRR-205ENST00000537619 DDRGK1Q96HY6 314 aa11.85□□□□□ -0.51
PTPRR-205ENST00000537619 KDRP35968 1356 aa11.85□□□□□ -0.51
PTPRR-205ENST00000537619 FOXO3O43524 673 aa11.84□□□□□ -0.51
PTPRR-205ENST00000537619 NUTM2GQ5VZR2 741 aa11.84□□□□□ -0.51
PTPRR-205ENST00000537619 SMC5Q8IY18 1101 aa11.84□□□□□ -0.51
PTPRR-205ENST00000537619 RBM33Q96EV2 1170 aaKnown RBP11.84□□□□□ -0.51
PTPRR-205ENST00000537619 IGSF1Q8N6C5 1336 aa11.84□□□□□ -0.51
PTPRR-205ENST00000537619 CHL1O00533 1208 aa11.84□□□□□ -0.51
PTPRR-205ENST00000537619 ARHGAP45Q92619 1136 aa11.84□□□□□ -0.51
PTPRR-205ENST00000537619 EYA1Q99502 592 aa11.84□□□□□ -0.51
PTPRR-205ENST00000537619 RGS12O14924 1447 aa11.83□□□□□ -0.51
PTPRR-205ENST00000537619 ZBTB7BO15156 539 aaPredicted RBP11.83□□□□□ -0.52
PTPRR-205ENST00000537619 MTHFSDQ2M296 383 aaKnown RBP11.83□□□□□ -0.52
PTPRR-205ENST00000537619 NLRP6P59044 892 aa11.82□□□□□ -0.52
PTPRR-205ENST00000537619 C1orf115Q9H7X2 142 aa11.82□□□□□ -0.52
PTPRR-205ENST00000537619 ANKLE2Q86XL3 938 aa11.82□□□□□ -0.52
PTPRR-205ENST00000537619 HOXC9P31274 260 aa11.81□□□□□ -0.52
PTPRR-205ENST00000537619 AMPHP49418 695 aa11.81□□□□□ -0.52
PTPRR-205ENST00000537619 SIRT2Q8IXJ6 389 aa11.8□□□□□ -0.52
PTPRR-205ENST00000537619 LRRC37A3O60309 1634 aa11.8□□□□□ -0.52
PTPRR-205ENST00000537619 ADGRL3Q9HAR2 1447 aa11.8□□□□□ -0.52
PTPRR-205ENST00000537619 KIAA0232Q92628 1395 aa11.8□□□□□ -0.52
PTPRR-205ENST00000537619 MIS18AQ9NYP9 233 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms