RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 FOXO3O43524 673 aa14.75□□□□□ -0.05
CIT-208ENST00000537607 TPM1P09493 284 aa14.75□□□□□ -0.05
CIT-208ENST00000537607 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
CIT-208ENST00000537607 FANCAO15360 1455 aa14.75□□□□□ -0.05
CIT-208ENST00000537607 GPATCH8Q9UKJ3 1502 aaKnown RBP14.75□□□□□ -0.05
CIT-208ENST00000537607 HIP1O00291 1037 aa14.75□□□□□ -0.05
CIT-208ENST00000537607 WASLO00401 505 aaPredicted RBP14.75□□□□□ -0.05
CIT-208ENST00000537607 RARSP54136 660 aaKnown RBP14.75□□□□□ -0.05
CIT-208ENST00000537607 RNF214Q8ND24 703 aa14.75□□□□□ -0.05
CIT-208ENST00000537607 BIVM-ERCC5R4GMW8 1640 aa14.75□□□□□ -0.05
CIT-208ENST00000537607 TRAK2O60296 914 aa14.75□□□□□ -0.05
CIT-208ENST00000537607 CCAR2Q8N163 923 aaKnown RBP14.75□□□□□ -0.05
CIT-208ENST00000537607 EXOC6BQ9Y2D4 811 aa14.75□□□□□ -0.05
CIT-208ENST00000537607 RPAP2Q8IXW5 612 aaPredicted RBP14.74□□□□□ -0.05
CIT-208ENST00000537607 USHBP1Q8N6Y0 703 aa14.74□□□□□ -0.05
CIT-208ENST00000537607 KCNH5Q8NCM2 988 aa14.74□□□□□ -0.05
CIT-208ENST00000537607 MCM2P49736 904 aa14.74□□□□□ -0.05
CIT-208ENST00000537607 SKAP1Q86WV1 359 aa14.74□□□□□ -0.05
CIT-208ENST00000537607 CCDC158Q5M9N0 1113 aa14.74□□□□□ -0.05
CIT-208ENST00000537607 KLHL34Q8N239 644 aa14.74□□□□□ -0.05
CIT-208ENST00000537607 ZNF592Q92610 1267 aa14.74□□□□□ -0.05
CIT-208ENST00000537607 ATP2B1P20020 1258 aa14.73□□□□□ -0.05
CIT-208ENST00000537607 SDF4Q9BRK5 362 aa14.73□□□□□ -0.05
CIT-208ENST00000537607 C14orf93Q9H972 538 aaKnown RBP14.73□□□□□ -0.05
CIT-208ENST00000537607 PTPRKQ15262 1439 aa14.73□□□□□ -0.05
CIT-208ENST00000537607 HOOK1Q9UJC3 728 aaKnown RBP14.73□□□□□ -0.05
CIT-208ENST00000537607 CTDP1Q9Y5B0 961 aaPredicted RBP14.73□□□□□ -0.05
CIT-208ENST00000537607 RRP12Q5JTH9 1297 aaKnown RBP14.73□□□□□ -0.05
CIT-208ENST00000537607 CAVIN1Q6NZI2 390 aaKnown RBP14.73□□□□□ -0.05
CIT-208ENST00000537607 AACSQ86V21 672 aa14.73□□□□□ -0.05
CIT-208ENST00000537607 CEP89Q96ST8 783 aa14.73□□□□□ -0.05
CIT-208ENST00000537607 DHX29Q7Z478 1369 aaKnown RBP14.72□□□□□ -0.05
CIT-208ENST00000537607 CCDC47Q96A33 483 aaKnown RBP14.72□□□□□ -0.05
CIT-208ENST00000537607 PRPF40AO75400 957 aaKnown RBP14.72□□□□□ -0.05
CIT-208ENST00000537607 DISP3Q9P2K9 1392 aa14.72□□□□□ -0.05
CIT-208ENST00000537607 TPM2P07951 284 aa14.72□□□□□ -0.05
CIT-208ENST00000537607 TTC39AQ5SRH9 613 aa14.72□□□□□ -0.05
CIT-208ENST00000537607 PCMTD1Q96MG8 357 aaPredicted RBP14.72□□□□□ -0.05
CIT-208ENST00000537607 PHF8Q9UPP1 1060 aa14.72□□□□□ -0.05
CIT-208ENST00000537607 FIBPO43427 364 aa14.72□□□□□ -0.05
CIT-208ENST00000537607 TCEAL9Q9UHQ7 104 aa14.72□□□□□ -0.05
CIT-208ENST00000537607 SCAF11Q99590 1463 aaKnown RBP14.71□□□□□ -0.05
CIT-208ENST00000537607 PTCD1O75127 700 aaKnown RBP14.71□□□□□ -0.05
CIT-208ENST00000537607 SART3Q15020 963 aaKnown RBP14.71□□□□□ -0.05
CIT-208ENST00000537607 CCDC57Q2TAC2 916 aa14.71□□□□□ -0.05
CIT-208ENST00000537607 DENND4BO75064 1496 aaPredicted RBP14.71□□□□□ -0.05
CIT-208ENST00000537607 PDCP20941 246 aa14.71□□□□□ -0.05
CIT-208ENST00000537607 ANKRD20A12PQ8NF67 263 aa14.71□□□□□ -0.05
CIT-208ENST00000537607 CCDC85AQ96PX6 553 aaPredicted RBP14.71□□□□□ -0.05
CIT-208ENST00000537607 IFT57Q9NWB7 429 aa14.7□□□□□ -0.06
CIT-208ENST00000537607 CYP46A1Q9Y6A2 500 aa14.7□□□□□ -0.06
CIT-208ENST00000537607 ANO8Q9HCE9 1232 aaPredicted RBP14.69□□□□□ -0.06
CIT-208ENST00000537607 CEP126Q9P2H0 1117 aa14.69□□□□□ -0.06
CIT-208ENST00000537607 FAM135AQ9P2D6 1515 aa14.69□□□□□ -0.06
CIT-208ENST00000537607 IPO7O95373 1038 aaKnown RBP14.69□□□□□ -0.06
CIT-208ENST00000537607 FKBP4Q02790 459 aaKnown RBP eCLIP14.69□□□□□ -0.06
CIT-208ENST00000537607 STK3Q13188 491 aa14.69□□□□□ -0.06
CIT-208ENST00000537607 MPHOSPH8Q99549 860 aa14.69□□□□□ -0.06
CIT-208ENST00000537607 NASPP49321 788 aaPredicted RBP14.69□□□□□ -0.06
CIT-208ENST00000537607 ATP10BO94823 1461 aa14.69□□□□□ -0.06
CIT-208ENST00000537607 F6X3S4 739 aa14.68□□□□□ -0.06
CIT-208ENST00000537607 FBLN1P23142 703 aa14.68□□□□□ -0.06
CIT-208ENST00000537607 MRE11P49959 708 aa14.68□□□□□ -0.06
CIT-208ENST00000537607 CWC27Q6UX04 472 aaKnown RBP14.68□□□□□ -0.06
CIT-208ENST00000537607 ABCC11Q96J66 1382 aa14.68□□□□□ -0.06
CIT-208ENST00000537607 XBP1P17861 261 aa14.68□□□□□ -0.06
CIT-208ENST00000537607 K7ELQ4 463 aaPredicted RBP14.68□□□□□ -0.06
CIT-208ENST00000537607 MBD3O95983 291 aa14.68□□□□□ -0.06
CIT-208ENST00000537607 CEBPZQ03701 1054 aaKnown RBP14.68□□□□□ -0.06
CIT-208ENST00000537607 TAF7Q15545 349 aaPredicted RBP14.68□□□□□ -0.06
CIT-208ENST00000537607 NUTM1Q86Y26 1132 aa14.68□□□□□ -0.06
CIT-208ENST00000537607 HOMER1Q86YM7 354 aa14.68□□□□□ -0.06
CIT-208ENST00000537607 STK11IPQ8N1F8 1099 aa14.67□□□□□ -0.06
CIT-208ENST00000537607 MPRIPQ6WCQ1 1025 aa14.67□□□□□ -0.06
CIT-208ENST00000537607 PIP4K2BP78356 416 aa14.67□□□□□ -0.06
CIT-208ENST00000537607 GOLGA6L1Q8N7Z2 621 aa14.67□□□□□ -0.06
CIT-208ENST00000537607 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.67□□□□□ -0.062e-6■■■■□ 20.6
CIT-208ENST00000537607 BRMS1Q9HCU9 246 aa14.67□□□□□ -0.06
CIT-208ENST00000537607 ALDH1L2Q3SY69 923 aa14.67□□□□□ -0.06
CIT-208ENST00000537607 NKTRP30414 1462 aaKnown RBP14.67□□□□□ -0.06
CIT-208ENST00000537607 A0A0U1RQG5 324 aaPredicted RBP14.66□□□□□ -0.06
CIT-208ENST00000537607 SMARCA5O60264 1052 aaPredicted RBP14.66□□□□□ -0.06
CIT-208ENST00000537607 GNL3LQ9NVN8 582 aaKnown RBP14.66□□□□□ -0.06
CIT-208ENST00000537607 TRIM27P14373 513 aa14.65□□□□□ -0.06
CIT-208ENST00000537607 KINO60870 393 aaKnown RBP14.65□□□□□ -0.06
CIT-208ENST00000537607 BLOC1S2Q6QNY1 142 aa14.65□□□□□ -0.06
CIT-208ENST00000537607 IKQ13123 557 aaPredicted RBP14.64□□□□□ -0.07
CIT-208ENST00000537607 NUP153P49790 1475 aaKnown RBP14.64□□□□□ -0.07
CIT-208ENST00000537607 KDM5BQ9UGL1 1544 aa14.64□□□□□ -0.07
CIT-208ENST00000537607 FMNL2Q96PY5 1086 aa14.64□□□□□ -0.07
CIT-208ENST00000537607 FAM43AQ8N2R8 423 aa14.64□□□□□ -0.07
CIT-208ENST00000537607 FAM83GA6ND36 823 aa14.63□□□□□ -0.07
CIT-208ENST00000537607 JAKMIP1Q96N16 626 aaKnown RBP14.63□□□□□ -0.07
CIT-208ENST00000537607 RSPH6AQ9H0K4 717 aa14.63□□□□□ -0.07
CIT-208ENST00000537607 CWC22Q9HCG8 908 aaKnown RBP14.63□□□□□ -0.07
CIT-208ENST00000537607 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
CIT-208ENST00000537607 HSP90AA2PQ14568 343 aaPredicted RBP14.63□□□□□ -0.07
CIT-208ENST00000537607 STK38Q15208 465 aa14.63□□□□□ -0.07
CIT-208ENST00000537607 AMOTQ4VCS5 1084 aa14.63□□□□□ -0.07
CIT-208ENST00000537607 KIF1BPQ96EK5 621 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms