RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 PAK3O75914 559 aaPredicted RBP22.5■■□□□ 1.19
SNX17-210ENST00000537606 NLRP6P59044 892 aa22.5■■□□□ 1.19
SNX17-210ENST00000537606 ZNF142P52746 1687 aaPredicted RBP22.5■■□□□ 1.19
SNX17-210ENST00000537606 MAP3K19Q56UN5 1328 aa22.49■■□□□ 1.19
SNX17-210ENST00000537606 FAM83GA6ND36 823 aa22.49■■□□□ 1.19
SNX17-210ENST00000537606 USP31Q70CQ4 1352 aa22.49■■□□□ 1.19
SNX17-210ENST00000537606 SMC4Q9NTJ3 1288 aa22.48■■□□□ 1.19
SNX17-210ENST00000537606 SSH1Q8WYL5 1049 aa22.48■■□□□ 1.19
SNX17-210ENST00000537606 CHD2O14647 1828 aaKnown RBP22.48■■□□□ 1.19
SNX17-210ENST00000537606 PDE4AP27815 886 aa22.47■■□□□ 1.19
SNX17-210ENST00000537606 DCTN1Q14203 1278 aa22.47■■□□□ 1.19
SNX17-210ENST00000537606 CENPQQ7L2Z9 268 aaPredicted RBP22.47■■□□□ 1.19
SNX17-210ENST00000537606 C14orf37Q86TY3 774 aa22.47■■□□□ 1.19
SNX17-210ENST00000537606 ANKARQ7Z5J8 1434 aa22.46■■□□□ 1.19
SNX17-210ENST00000537606 PEAK1Q9H792 1746 aa22.46■■□□□ 1.19
SNX17-210ENST00000537606 NPHP4O75161 1426 aaPredicted RBP22.45■■□□□ 1.19
SNX17-210ENST00000537606 ABTB2Q8N961 1025 aa22.45■■□□□ 1.18
SNX17-210ENST00000537606 IGHDP01880 384 aa22.44■■□□□ 1.18
SNX17-210ENST00000537606 CT47B1P0C2W7 299 aaPredicted RBP22.44■■□□□ 1.18
SNX17-210ENST00000537606 PHF8Q9UPP1 1060 aa22.44■■□□□ 1.18
SNX17-210ENST00000537606 AMPHP49418 695 aa22.43■■□□□ 1.18
SNX17-210ENST00000537606 ERICH6Q7L0X2 663 aa22.43■■□□□ 1.18
SNX17-210ENST00000537606 FMN2Q9NZ56 1722 aa22.43■■□□□ 1.18
SNX17-210ENST00000537606 NALCNQ8IZF0 1738 aa22.43■■□□□ 1.18
SNX17-210ENST00000537606 ESCO1Q5FWF5 840 aa22.43■■□□□ 1.18
SNX17-210ENST00000537606 ZKSCAN2Q63HK3 967 aa22.43■■□□□ 1.18
SNX17-210ENST00000537606 ELL2O00472 640 aaPredicted RBP22.42■■□□□ 1.18
SNX17-210ENST00000537606 NPM2Q86SE8 214 aaKnown RBP22.42■■□□□ 1.18
SNX17-210ENST00000537606 BACH2Q9BYV9 841 aa22.42■■□□□ 1.18
SNX17-210ENST00000537606 PIK3C2AO00443 1686 aa22.42■■□□□ 1.18
SNX17-210ENST00000537606 MS4A1P11836 297 aa22.41■■□□□ 1.18
SNX17-210ENST00000537606 NOB1Q9ULX3 412 aaKnown RBP22.41■■□□□ 1.18
SNX17-210ENST00000537606 FTSJ3Q8IY81 847 aaKnown RBP22.4■■□□□ 1.18
SNX17-210ENST00000537606 ANP32AP39687 249 aaKnown RBP22.4■■□□□ 1.18
SNX17-210ENST00000537606 TSPYL6Q8N831 410 aa22.4■■□□□ 1.18
SNX17-210ENST00000537606 MBIPQ9NS73 344 aa22.4■■□□□ 1.18
SNX17-210ENST00000537606 TRIM27P14373 513 aa22.39■■□□□ 1.18
SNX17-210ENST00000537606 DLG5Q8TDM6 1919 aa22.39■■□□□ 1.17
SNX17-210ENST00000537606 DZIP1LQ8IYY4 767 aaKnown RBP22.39■■□□□ 1.17
SNX17-210ENST00000537606 PLEKHG5O94827 1062 aa22.38■■□□□ 1.17
SNX17-210ENST00000537606 GNAI1P63096 354 aa22.38■■□□□ 1.17
SNX17-210ENST00000537606 SBNO1A3KN83 1393 aa22.38■■□□□ 1.17
SNX17-210ENST00000537606 FLT4P35916 1363 aa22.38■■□□□ 1.17
SNX17-210ENST00000537606 CALD1Q05682 793 aaKnown RBP22.38■■□□□ 1.17
SNX17-210ENST00000537606 IFT57Q9NWB7 429 aa22.38■■□□□ 1.17
SNX17-210ENST00000537606 RGS3P49796 1198 aa22.37■■□□□ 1.17
SNX17-210ENST00000537606 LMOD3Q0VAK6 560 aa22.37■■□□□ 1.17
SNX17-210ENST00000537606 PCDHB15Q9Y5E8 787 aa22.37■■□□□ 1.17
SNX17-210ENST00000537606 PSME1Q06323 249 aa22.37■■□□□ 1.17
SNX17-210ENST00000537606 MCM10Q7L590 875 aa22.37■■□□□ 1.17
SNX17-210ENST00000537606 ORAI2Q96SN7 254 aa22.37■■□□□ 1.17
SNX17-210ENST00000537606 ZNF853P0CG23 659 aa22.36■■□□□ 1.17
SNX17-210ENST00000537606 XPCQ01831 940 aaPredicted RBP22.36■■□□□ 1.17
SNX17-210ENST00000537606 MVPQ14764 893 aaKnown RBP22.36■■□□□ 1.17
SNX17-210ENST00000537606 LTV1Q96GA3 475 aaPredicted RBP22.36■■□□□ 1.17
SNX17-210ENST00000537606 EYA1Q99502 592 aa22.36■■□□□ 1.17
SNX17-210ENST00000537606 ADGRL3Q9HAR2 1447 aa22.36■■□□□ 1.17
SNX17-210ENST00000537606 ATF7IPQ6VMQ6 1270 aa22.35■■□□□ 1.17
SNX17-210ENST00000537606 CFAP44Q96MT7 982 aa22.35■■□□□ 1.17
SNX17-210ENST00000537606 FOXO3O43524 673 aa22.35■■□□□ 1.17
SNX17-210ENST00000537606 VAMP4O75379 141 aa22.35■■□□□ 1.17
SNX17-210ENST00000537606 PROSER2Q86WR7 435 aaPredicted RBP22.34■■□□□ 1.17
SNX17-210ENST00000537606 NOP58Q9Y2X3 529 aaKnown RBP22.34■■□□□ 1.17
SNX17-210ENST00000537606 HOXC9P31274 260 aa22.33■■□□□ 1.17
SNX17-210ENST00000537606 IPO9Q96P70 1041 aaKnown RBP22.33■■□□□ 1.17
SNX17-210ENST00000537606 C8orf58Q8NAV2 365 aa22.33■■□□□ 1.17
SNX17-210ENST00000537606 ITPRIPQ8IWB1 547 aa22.32■■□□□ 1.16
SNX17-210ENST00000537606 MYT1Q01538 1121 aa22.32■■□□□ 1.16
SNX17-210ENST00000537606 ZBTB7CA1YPR0 619 aa22.31■■□□□ 1.16
SNX17-210ENST00000537606 MTHFSDQ2M296 383 aaKnown RBP22.31■■□□□ 1.16
SNX17-210ENST00000537606 ALDH1L2Q3SY69 923 aa22.31■■□□□ 1.16
SNX17-210ENST00000537606 TWISTNBQ3B726 338 aaPredicted RBP22.3■■□□□ 1.16
SNX17-210ENST00000537606 TMEM57Q8N5G2 664 aa22.3■■□□□ 1.16
SNX17-210ENST00000537606 RGPD1P0DJD0 1748 aa22.3■■□□□ 1.16
SNX17-210ENST00000537606 ARHGEF10O15013 1369 aa22.3■■□□□ 1.16
SNX17-210ENST00000537606 KRT24Q2M2I5 525 aa22.29■■□□□ 1.16
SNX17-210ENST00000537606 MARF1Q9Y4F3 1742 aaKnown RBP22.29■■□□□ 1.16
SNX17-210ENST00000537606 KIF16BQ96L93 1317 aa22.29■■□□□ 1.16
SNX17-210ENST00000537606 LMOD2Q6P5Q4 547 aa22.28■■□□□ 1.16
SNX17-210ENST00000537606 IPO8O15397 1037 aaKnown RBP22.28■■□□□ 1.16
SNX17-210ENST00000537606 MIS18AQ9NYP9 233 aa22.28■■□□□ 1.16
SNX17-210ENST00000537606 IGSF1Q8N6C5 1336 aa22.28■■□□□ 1.16
SNX17-210ENST00000537606 HSPA2P54652 639 aa22.27■■□□□ 1.16
SNX17-210ENST00000537606 MRPL50Q8N5N7 158 aaKnown RBP22.27■■□□□ 1.16
SNX17-210ENST00000537606 USHBP1Q8N6Y0 703 aa22.27■■□□□ 1.16
SNX17-210ENST00000537606 AAMPQ13685 434 aa22.25■■□□□ 1.15
SNX17-210ENST00000537606 ZNF428Q96B54 188 aa22.25■■□□□ 1.15
SNX17-210ENST00000537606 DDX19BQ9UMR2 479 aa22.25■■□□□ 1.15
SNX17-210ENST00000537606 KDRP35968 1356 aa22.24■■□□□ 1.15
SNX17-210ENST00000537606 ZBTB47Q9UFB7 747 aaPredicted RBP22.24■■□□□ 1.15
SNX17-210ENST00000537606 RTF1Q92541 710 aaKnown RBP22.23■■□□□ 1.15
SNX17-210ENST00000537606 CHL1O00533 1208 aa22.23■■□□□ 1.15
SNX17-210ENST00000537606 C8orf34Q49A92 452 aa22.22■■□□□ 1.15
SNX17-210ENST00000537606 RWDD1Q9H446 243 aaPredicted RBP22.22■■□□□ 1.15
SNX17-210ENST00000537606 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
SNX17-210ENST00000537606 BRPF1P55201 1214 aaPredicted RBP22.21■■□□□ 1.15
SNX17-210ENST00000537606 FAM161AQ3B820 660 aa22.2■■□□□ 1.14
SNX17-210ENST00000537606 IP6K1Q92551 441 aa22.2■■□□□ 1.14
SNX17-210ENST00000537606 NWD1Q149M9 1564 aa22.19■■□□□ 1.14
SNX17-210ENST00000537606 KIF24Q5T7B8 1368 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms