RNA–Protein interactions for RNA: ENST00000537578.5

TCF4-205, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-205ENST00000537578 FCHSD2O94868 740 aa11.83□□□□□ -0.52
TCF4-205ENST00000537578 AEBP1Q8IUX7 1158 aa11.83□□□□□ -0.52
TCF4-205ENST00000537578 PDE3AQ14432 1141 aa11.83□□□□□ -0.52
TCF4-205ENST00000537578 ZNF428Q96B54 188 aa11.83□□□□□ -0.52
TCF4-205ENST00000537578 SMC4Q9NTJ3 1288 aa11.83□□□□□ -0.52
TCF4-205ENST00000537578 DLC1Q96QB1 1528 aa11.82□□□□□ -0.52
TCF4-205ENST00000537578 MAP2P11137 1827 aaKnown RBP11.82□□□□□ -0.52
TCF4-205ENST00000537578 TTC21BQ7Z4L5 1316 aa11.81□□□□□ -0.52
TCF4-205ENST00000537578 HSP90AB2PQ58FF8 381 aa11.81□□□□□ -0.52
TCF4-205ENST00000537578 KCNA6P17658 529 aa11.81□□□□□ -0.52
TCF4-205ENST00000537578 ANP32AP39687 249 aaKnown RBP11.81□□□□□ -0.52
TCF4-205ENST00000537578 THEMISQ8N1K5 641 aaPredicted RBP11.81□□□□□ -0.52
TCF4-205ENST00000537578 TSPYL6Q8N831 410 aa11.81□□□□□ -0.52
TCF4-205ENST00000537578 UBR1Q8IWV7 1749 aa11.8□□□□□ -0.52
TCF4-205ENST00000537578 PDE4CQ08493 712 aa11.8□□□□□ -0.52
TCF4-205ENST00000537578 IFNLR1Q8IU57 520 aaPredicted RBP11.8□□□□□ -0.52
TCF4-205ENST00000537578 SIRT1Q96EB6 747 aa11.8□□□□□ -0.52
TCF4-205ENST00000537578 NOB1Q9ULX3 412 aaKnown RBP11.8□□□□□ -0.52
TCF4-205ENST00000537578 EDC4Q6P2E9 1401 aaKnown RBP11.8□□□□□ -0.52
TCF4-205ENST00000537578 ZNF692Q9BU19 519 aaPredicted RBP11.8□□□□□ -0.52
TCF4-205ENST00000537578 ATP7BP35670 1465 aa11.8□□□□□ -0.52
TCF4-205ENST00000537578 NGDNQ8NEJ9 315 aaKnown RBP11.79□□□□□ -0.52
TCF4-205ENST00000537578 PLEKHG1Q9ULL1 1385 aa11.79□□□□□ -0.52
TCF4-205ENST00000537578 FAM135BQ49AJ0 1406 aa11.79□□□□□ -0.52
TCF4-205ENST00000537578 BRD2P25440 801 aaKnown RBP11.79□□□□□ -0.52
TCF4-205ENST00000537578 SULT6B1Q6IMI4 303 aa11.79□□□□□ -0.52
TCF4-205ENST00000537578 MED14O60244 1454 aa11.79□□□□□ -0.52
TCF4-205ENST00000537578 NEFMP07197 916 aa11.79□□□□□ -0.52
TCF4-205ENST00000537578 MS4A1P11836 297 aa11.79□□□□□ -0.52
TCF4-205ENST00000537578 TRIM27P14373 513 aa11.79□□□□□ -0.52
TCF4-205ENST00000537578 IPO9Q96P70 1041 aaKnown RBP11.79□□□□□ -0.52
TCF4-205ENST00000537578 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.78□□□□□ -0.52
TCF4-205ENST00000537578 EIF4A2Q14240 407 aaKnown RBP11.78□□□□□ -0.52
TCF4-205ENST00000537578 NFE2L2Q16236 605 aa11.78□□□□□ -0.52
TCF4-205ENST00000537578 FTSJ3Q8IY81 847 aaKnown RBP11.78□□□□□ -0.52
TCF4-205ENST00000537578 NOP58Q9Y2X3 529 aaKnown RBP11.78□□□□□ -0.52
TCF4-205ENST00000537578 TBX22Q9Y458 520 aa11.78□□□□□ -0.52
TCF4-205ENST00000537578 ZKSCAN2Q63HK3 967 aa11.78□□□□□ -0.52
TCF4-205ENST00000537578 TECPR2O15040 1411 aa11.77□□□□□ -0.52
TCF4-205ENST00000537578 SLC4A3P48751 1232 aa11.77□□□□□ -0.53
TCF4-205ENST00000537578 DZIP1LQ8IYY4 767 aaKnown RBP11.77□□□□□ -0.53
TCF4-205ENST00000537578 PLEKHG3A1L390 1219 aa11.77□□□□□ -0.53
TCF4-205ENST00000537578 KRT24Q2M2I5 525 aa11.77□□□□□ -0.53
TCF4-205ENST00000537578 ITPRIPQ8IWB1 547 aa11.76□□□□□ -0.53
TCF4-205ENST00000537578 PNNQ9H307 717 aaKnown RBP11.76□□□□□ -0.53
TCF4-205ENST00000537578 ZBTB47Q9UFB7 747 aaPredicted RBP11.76□□□□□ -0.53
TCF4-205ENST00000537578 MVPQ14764 893 aaKnown RBP11.75□□□□□ -0.53
TCF4-205ENST00000537578 C8orf34Q49A92 452 aa11.75□□□□□ -0.53
TCF4-205ENST00000537578 MCM10Q7L590 875 aa11.75□□□□□ -0.53
TCF4-205ENST00000537578 TMEM57Q8N5G2 664 aa11.75□□□□□ -0.53
TCF4-205ENST00000537578 MIS18AQ9NYP9 233 aa11.75□□□□□ -0.53
TCF4-205ENST00000537578 KIF20BQ96Q89 1820 aa11.75□□□□□ -0.53
TCF4-205ENST00000537578 LRRC7Q96NW7 1537 aa11.75□□□□□ -0.53
TCF4-205ENST00000537578 FOXO3O43524 673 aa11.75□□□□□ -0.53
TCF4-205ENST00000537578 C8orf58Q8NAV2 365 aa11.75□□□□□ -0.53
TCF4-205ENST00000537578 MBIPQ9NS73 344 aa11.75□□□□□ -0.53
TCF4-205ENST00000537578 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
TCF4-205ENST00000537578 C3P01024 1663 aa11.74□□□□□ -0.53
TCF4-205ENST00000537578 NLRP6P59044 892 aa11.74□□□□□ -0.53
TCF4-205ENST00000537578 ATF7IPQ6VMQ6 1270 aa11.74□□□□□ -0.53
TCF4-205ENST00000537578 ANKRD26Q9UPS8 1709 aa11.74□□□□□ -0.53
TCF4-205ENST00000537578 VAMP4O75379 141 aa11.73□□□□□ -0.53
TCF4-205ENST00000537578 SEC24BO95487 1268 aa11.73□□□□□ -0.53
TCF4-205ENST00000537578 LTV1Q96GA3 475 aaPredicted RBP11.73□□□□□ -0.53
TCF4-205ENST00000537578 PDZRN3Q9UPQ7 1066 aa11.73□□□□□ -0.53
TCF4-205ENST00000537578 MAP3K19Q56UN5 1328 aa11.73□□□□□ -0.53
TCF4-205ENST00000537578 CDC42BPGQ6DT37 1551 aa11.73□□□□□ -0.53
TCF4-205ENST00000537578 FAM161AQ3B820 660 aa11.72□□□□□ -0.53
TCF4-205ENST00000537578 IL16Q14005 1332 aa11.72□□□□□ -0.53
TCF4-205ENST00000537578 AATKQ6ZMQ8 1374 aa11.72□□□□□ -0.53
TCF4-205ENST00000537578 USP6P35125 1406 aa11.72□□□□□ -0.53
TCF4-205ENST00000537578 DNAJC5Q9H3Z4 198 aa11.72□□□□□ -0.53
TCF4-205ENST00000537578 XPCQ01831 940 aaPredicted RBP11.71□□□□□ -0.53
TCF4-205ENST00000537578 HMGB1P09429 215 aaKnown RBP11.71□□□□□ -0.54
TCF4-205ENST00000537578 AMPHP49418 695 aa11.71□□□□□ -0.54
TCF4-205ENST00000537578 TWISTNBQ3B726 338 aaPredicted RBP11.7□□□□□ -0.54
TCF4-205ENST00000537578 ABTB2Q8N961 1025 aa11.7□□□□□ -0.54
TCF4-205ENST00000537578 ZNF853P0CG23 659 aa11.69□□□□□ -0.54
TCF4-205ENST00000537578 GNAI1P63096 354 aa11.69□□□□□ -0.54
TCF4-205ENST00000537578 ANKLE2Q86XL3 938 aa11.69□□□□□ -0.54
TCF4-205ENST00000537578 RGPD8O14715 1765 aaPredicted RBP11.69□□□□□ -0.54
TCF4-205ENST00000537578 ARHGAP23Q9P227 1491 aa11.69□□□□□ -0.54
TCF4-205ENST00000537578 CT47B1P0C2W7 299 aaPredicted RBP11.68□□□□□ -0.54
TCF4-205ENST00000537578 MRPL50Q8N5N7 158 aaKnown RBP11.68□□□□□ -0.54
TCF4-205ENST00000537578 EYA1Q99502 592 aa11.68□□□□□ -0.54
TCF4-205ENST00000537578 RWDD1Q9H446 243 aaPredicted RBP11.68□□□□□ -0.54
TCF4-205ENST00000537578 FER1L4A9Z1Z3 1794 aa11.68□□□□□ -0.54
TCF4-205ENST00000537578 CDK12Q9NYV4 1490 aaPredicted RBP11.68□□□□□ -0.54
TCF4-205ENST00000537578 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
TCF4-205ENST00000537578 MTHFSDQ2M296 383 aaKnown RBP11.68□□□□□ -0.54
TCF4-205ENST00000537578 USHBP1Q8N6Y0 703 aa11.68□□□□□ -0.54
TCF4-205ENST00000537578 IFT57Q9NWB7 429 aa11.68□□□□□ -0.54
TCF4-205ENST00000537578 OVOS2A0A0J9YW53 1432 aa11.67□□□□□ -0.54
TCF4-205ENST00000537578 OVOS2Q6IE36 1432 aa11.67□□□□□ -0.54
TCF4-205ENST00000537578 ESCO1Q5FWF5 840 aa11.67□□□□□ -0.54
TCF4-205ENST00000537578 ZBTB40Q9NUA8 1239 aa11.67□□□□□ -0.54
TCF4-205ENST00000537578 SLIT1O75093 1534 aa11.67□□□□□ -0.54
TCF4-205ENST00000537578 KNDC1Q76NI1 1749 aa11.67□□□□□ -0.54
TCF4-205ENST00000537578 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
TCF4-205ENST00000537578 IPO8O15397 1037 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms