RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 RABEP1Q15276 862 aa15.81■□□□□ 0.12
PTPN21-202ENST00000536337 HSP90AB2PQ58FF8 381 aa15.8■□□□□ 0.12
PTPN21-202ENST00000536337 UPF3BQ9BZI7 483 aaKnown RBP15.8■□□□□ 0.12
PTPN21-202ENST00000536337 IFT57Q9NWB7 429 aa15.8■□□□□ 0.12
PTPN21-202ENST00000536337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.8■□□□□ 0.12
PTPN21-202ENST00000536337 WASLO00401 505 aaPredicted RBP15.8■□□□□ 0.12
PTPN21-202ENST00000536337 SMC5Q8IY18 1101 aa15.8■□□□□ 0.12
PTPN21-202ENST00000536337 BMP2KLQ5H9B9 411 aa15.8■□□□□ 0.12
PTPN21-202ENST00000536337 C9orf78Q9NZ63 289 aaPredicted RBP15.79■□□□□ 0.12
PTPN21-202ENST00000536337 UBTFL1P0CB47 393 aaPredicted RBP15.79■□□□□ 0.12
PTPN21-202ENST00000536337 AIMP1Q12904 312 aaKnown RBP15.79■□□□□ 0.12
PTPN21-202ENST00000536337 ABTB2Q8N961 1025 aa15.79■□□□□ 0.12
PTPN21-202ENST00000536337 MEIS3Q99687 375 aa15.78■□□□□ 0.12
PTPN21-202ENST00000536337 LARP6Q9BRS8 491 aaKnown RBP15.78■□□□□ 0.12
PTPN21-202ENST00000536337 ABCC11Q96J66 1382 aa15.78■□□□□ 0.12
PTPN21-202ENST00000536337 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
PTPN21-202ENST00000536337 GNAI2P04899 355 aa15.78■□□□□ 0.12
PTPN21-202ENST00000536337 DRC7Q8IY82 874 aa15.77■□□□□ 0.12
PTPN21-202ENST00000536337 ERCC6L2Q5T890 1561 aa15.77■□□□□ 0.12
PTPN21-202ENST00000536337 CSB-PGBD3P0DP91 1061 aa15.77■□□□□ 0.12
PTPN21-202ENST00000536337 MRPL50Q8N5N7 158 aaKnown RBP15.77■□□□□ 0.12
PTPN21-202ENST00000536337 ESPNB1AK53 854 aa15.77■□□□□ 0.11
PTPN21-202ENST00000536337 ERC2O15083 957 aa15.76■□□□□ 0.11
PTPN21-202ENST00000536337 OTUD7AQ8TE49 926 aaPredicted RBP15.76■□□□□ 0.11
PTPN21-202ENST00000536337 ZNF692Q9BU19 519 aaPredicted RBP15.76■□□□□ 0.11
PTPN21-202ENST00000536337 DIAPH3Q9NSV4 1193 aa15.76■□□□□ 0.11
PTPN21-202ENST00000536337 CEBPAP49715 358 aaPredicted RBP15.76■□□□□ 0.11
PTPN21-202ENST00000536337 USHBP1Q8N6Y0 703 aa15.76■□□□□ 0.11
PTPN21-202ENST00000536337 SYAP1Q96A49 352 aaPredicted RBP15.76■□□□□ 0.11
PTPN21-202ENST00000536337 PRDM15P57071 1507 aaPredicted RBP15.76■□□□□ 0.11
PTPN21-202ENST00000536337 INSRP06213 1382 aa15.76■□□□□ 0.11
PTPN21-202ENST00000536337 ZBTB7BO15156 539 aaPredicted RBP15.75■□□□□ 0.11
PTPN21-202ENST00000536337 FOXO3O43524 673 aa15.75■□□□□ 0.11
PTPN21-202ENST00000536337 HDGFL1Q5TGJ6 251 aa15.75■□□□□ 0.11
PTPN21-202ENST00000536337 NUTM1Q86Y26 1132 aa15.75■□□□□ 0.11
PTPN21-202ENST00000536337 RPAP2Q8IXW5 612 aaPredicted RBP15.75■□□□□ 0.11
PTPN21-202ENST00000536337 DDX54Q8TDD1 881 aaKnown RBP15.75■□□□□ 0.11
PTPN21-202ENST00000536337 GAS2L2Q8NHY3 880 aa15.75■□□□□ 0.11
PTPN21-202ENST00000536337 NSD2O96028 1365 aa15.75■□□□□ 0.11
PTPN21-202ENST00000536337 VSIG10Q8N0Z9 540 aa15.75■□□□□ 0.11
PTPN21-202ENST00000536337 VPS37CA5D8V6 355 aaPredicted RBP15.74■□□□□ 0.11
PTPN21-202ENST00000536337 FAM13BQ9NYF5 915 aa15.74■□□□□ 0.11
PTPN21-202ENST00000536337 USP19O94966 1318 aa15.74■□□□□ 0.11
PTPN21-202ENST00000536337 KIAA2012Q0VF49 1180 aa15.74■□□□□ 0.11
PTPN21-202ENST00000536337 IL16Q14005 1332 aa15.74■□□□□ 0.11
PTPN21-202ENST00000536337 CCDC30Q5VVM6 783 aa15.74■□□□□ 0.11
PTPN21-202ENST00000536337 LRRCC1Q9C099 1032 aa15.74■□□□□ 0.11
PTPN21-202ENST00000536337 GNAI3P08754 354 aa15.73■□□□□ 0.11
PTPN21-202ENST00000536337 PSME1Q06323 249 aa15.73■□□□□ 0.11
PTPN21-202ENST00000536337 SDSP20132 328 aa15.73■□□□□ 0.11
PTPN21-202ENST00000536337 CIZ1Q9ULV3 898 aaPredicted RBP15.73■□□□□ 0.11
PTPN21-202ENST00000536337 R3HCC1Q9Y3T6 440 aaKnown RBP15.73■□□□□ 0.11
PTPN21-202ENST00000536337 TRPM1Q7Z4N2 1603 aa15.72■□□□□ 0.11
PTPN21-202ENST00000536337 GDPD2Q9HCC8 539 aa15.72■□□□□ 0.11
PTPN21-202ENST00000536337 ATP7AQ04656 1500 aa15.72■□□□□ 0.11
PTPN21-202ENST00000536337 IFIT2P09913 472 aaKnown RBP15.71■□□□□ 0.11
PTPN21-202ENST00000536337 XPCQ01831 940 aaPredicted RBP15.71■□□□□ 0.11
PTPN21-202ENST00000536337 NPATQ14207 1427 aa15.71■□□□□ 0.11
PTPN21-202ENST00000536337 ZRSR1Q15695 479 aaKnown RBP15.71■□□□□ 0.11
PTPN21-202ENST00000536337 RRAGDQ9NQL2 400 aaPredicted RBP15.71■□□□□ 0.1
PTPN21-202ENST00000536337 RBM27Q9P2N5 1060 aaKnown RBP15.71■□□□□ 0.1
PTPN21-202ENST00000536337 SYCE3A1L190 88 aa15.7■□□□□ 0.1
PTPN21-202ENST00000536337 SRGAP3O43295 1099 aa15.7■□□□□ 0.1
PTPN21-202ENST00000536337 ANXA1P04083 346 aa15.7■□□□□ 0.1
PTPN21-202ENST00000536337 HSP90B1P14625 803 aaKnown RBP15.7■□□□□ 0.1
PTPN21-202ENST00000536337 C1orf141Q5JVX7 400 aa15.7■□□□□ 0.1
PTPN21-202ENST00000536337 BAG4O95429 457 aaKnown RBP15.7■□□□□ 0.1
PTPN21-202ENST00000536337 CCT4P50991 539 aaKnown RBP15.7■□□□□ 0.1
PTPN21-202ENST00000536337 BCL11BQ9C0K0 894 aaPredicted RBP15.7■□□□□ 0.1
PTPN21-202ENST00000536337 ZNF518AQ6AHZ1 1483 aa15.7■□□□□ 0.1
PTPN21-202ENST00000536337 FIBPO43427 364 aa15.7■□□□□ 0.1
PTPN21-202ENST00000536337 RBM10P98175 930 aaKnown RBP15.7■□□□□ 0.1
PTPN21-202ENST00000536337 GPATCH3Q96I76 525 aa15.7■□□□□ 0.1
PTPN21-202ENST00000536337 DTNBO60941 627 aa15.69■□□□□ 0.1
PTPN21-202ENST00000536337 FOSBP53539 338 aa15.69■□□□□ 0.1
PTPN21-202ENST00000536337 SMC3Q9UQE7 1217 aa15.69■□□□□ 0.1
PTPN21-202ENST00000536337 EIF4A2Q14240 407 aaKnown RBP15.69■□□□□ 0.1
PTPN21-202ENST00000536337 TTC22Q5TAA0 569 aa15.69■□□□□ 0.1
PTPN21-202ENST00000536337 CWC27Q6UX04 472 aaKnown RBP15.69■□□□□ 0.1
PTPN21-202ENST00000536337 PLEKHF1Q96S99 279 aa15.69■□□□□ 0.1
PTPN21-202ENST00000536337 ACEP12821 1306 aa15.69■□□□□ 0.1
PTPN21-202ENST00000536337 LRRFIP2Q9Y608 721 aaKnown RBP15.68■□□□□ 0.1
PTPN21-202ENST00000536337 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
PTPN21-202ENST00000536337 PLEKHM2Q8IWE5 1019 aa15.68■□□□□ 0.1
PTPN21-202ENST00000536337 ZGPATQ8N5A5 531 aaKnown RBP15.68■□□□□ 0.1
PTPN21-202ENST00000536337 SIL1Q9H173 461 aa15.68■□□□□ 0.1
PTPN21-202ENST00000536337 G2E3Q7L622 706 aa15.67■□□□□ 0.1
PTPN21-202ENST00000536337 ARHGAP45Q92619 1136 aa15.67■□□□□ 0.1
PTPN21-202ENST00000536337 MX1P20591 662 aa15.66■□□□□ 0.1
PTPN21-202ENST00000536337 MYO5CQ9NQX4 1742 aa15.66■□□□□ 0.1
PTPN21-202ENST00000536337 ESCO1Q5FWF5 840 aa15.66■□□□□ 0.1
PTPN21-202ENST00000536337 ADCY10Q96PN6 1610 aa15.65■□□□□ 0.1
PTPN21-202ENST00000536337 CD2BP2O95400 341 aaKnown RBP15.65■□□□□ 0.1
PTPN21-202ENST00000536337 ZKSCAN1P17029 563 aaPredicted RBP15.65■□□□□ 0.1
PTPN21-202ENST00000536337 CLASRPQ8N2M8 674 aaKnown RBP15.65■□□□□ 0.1
PTPN21-202ENST00000536337 SRCIN1Q9C0H9 1055 aa15.65■□□□□ 0.1
PTPN21-202ENST00000536337 FLIIQ13045 1269 aa15.65■□□□□ 0.1
PTPN21-202ENST00000536337 CHAMP1Q96JM3 812 aa15.65■□□□□ 0.1
PTPN21-202ENST00000536337 CDC42BPBQ9Y5S2 1711 aa15.65■□□□□ 0.1
PTPN21-202ENST00000536337 IL13P35225 146 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms