RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 RTL1A6NKG5 1358 aa17.3■□□□□ 0.36
BEST1-208ENST00000534553 BCAR3O75815 825 aa17.3■□□□□ 0.36
BEST1-208ENST00000534553 MS4A1P11836 297 aa17.3■□□□□ 0.36
BEST1-208ENST00000534553 CANXP27824 592 aaKnown RBP17.3■□□□□ 0.36
BEST1-208ENST00000534553 DCCP43146 1447 aa17.3■□□□□ 0.36
BEST1-208ENST00000534553 ABTB2Q8N961 1025 aa17.29■□□□□ 0.36
BEST1-208ENST00000534553 C19orf44Q9H6X5 657 aa17.28■□□□□ 0.36
BEST1-208ENST00000534553 KIF1AQ12756 1690 aa17.28■□□□□ 0.36
BEST1-208ENST00000534553 AMPHP49418 695 aa17.28■□□□□ 0.36
BEST1-208ENST00000534553 GNAI1P63096 354 aa17.28■□□□□ 0.36
BEST1-208ENST00000534553 ESCO1Q5FWF5 840 aa17.28■□□□□ 0.36
BEST1-208ENST00000534553 C20orf194Q5TEA3 1177 aa17.28■□□□□ 0.36
BEST1-208ENST00000534553 PROSER2Q86WR7 435 aaPredicted RBP17.28■□□□□ 0.36
BEST1-208ENST00000534553 PHACTR3Q96KR7 559 aa17.28■□□□□ 0.36
BEST1-208ENST00000534553 IFT57Q9NWB7 429 aa17.28■□□□□ 0.36
BEST1-208ENST00000534553 KDRP35968 1356 aa17.26■□□□□ 0.35
BEST1-208ENST00000534553 PSME1Q06323 249 aa17.26■□□□□ 0.35
BEST1-208ENST00000534553 HSP90AB2PQ58FF8 381 aa17.26■□□□□ 0.35
BEST1-208ENST00000534553 KCNH5Q8NCM2 988 aa17.26■□□□□ 0.35
BEST1-208ENST00000534553 MARF1Q9Y4F3 1742 aaKnown RBP17.26■□□□□ 0.35
BEST1-208ENST00000534553 PAK3O75914 559 aaPredicted RBP17.26■□□□□ 0.35
BEST1-208ENST00000534553 SULT6B1Q6IMI4 303 aa17.26■□□□□ 0.35
BEST1-208ENST00000534553 KDM4FA0A1W2PPD8 638 aa17.24■□□□□ 0.35
BEST1-208ENST00000534553 EXOSC9Q06265 439 aaKnown RBP17.24■□□□□ 0.35
BEST1-208ENST00000534553 ALDH1L2Q3SY69 923 aa17.24■□□□□ 0.35
BEST1-208ENST00000534553 CENPQQ7L2Z9 268 aaPredicted RBP17.24■□□□□ 0.35
BEST1-208ENST00000534553 TSR2Q969E8 191 aaKnown RBP17.24■□□□□ 0.35
BEST1-208ENST00000534553 IGSF1Q8N6C5 1336 aa17.24■□□□□ 0.35
BEST1-208ENST00000534553 KIF16BQ96L93 1317 aa17.23■□□□□ 0.35
BEST1-208ENST00000534553 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
BEST1-208ENST00000534553 CFAP44Q96MT7 982 aa17.23■□□□□ 0.35
BEST1-208ENST00000534553 C1orf167Q5SNV9 1468 aa17.22■□□□□ 0.35
BEST1-208ENST00000534553 MST1RQ04912 1400 aa17.22■□□□□ 0.35
BEST1-208ENST00000534553 ZKSCAN2Q63HK3 967 aa17.22■□□□□ 0.35
BEST1-208ENST00000534553 PHRF1Q9P1Y6 1649 aaKnown RBP17.22■□□□□ 0.35
BEST1-208ENST00000534553 SOX12O15370 315 aa17.21■□□□□ 0.35
BEST1-208ENST00000534553 ZNF853P0CG23 659 aa17.21■□□□□ 0.35
BEST1-208ENST00000534553 HOXC9P31274 260 aa17.21■□□□□ 0.35
BEST1-208ENST00000534553 FRAT1Q92837 279 aaPredicted RBP17.21■□□□□ 0.35
BEST1-208ENST00000534553 BRPF1P55201 1214 aaPredicted RBP17.21■□□□□ 0.35
BEST1-208ENST00000534553 RBM33Q96EV2 1170 aaKnown RBP17.21■□□□□ 0.35
BEST1-208ENST00000534553 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
BEST1-208ENST00000534553 NFAT5O94916 1531 aa17.2■□□□□ 0.34
BEST1-208ENST00000534553 TCERG1O14776 1098 aaKnown RBP17.2■□□□□ 0.34
BEST1-208ENST00000534553 IPO8O15397 1037 aaKnown RBP17.2■□□□□ 0.34
BEST1-208ENST00000534553 GAS2L2Q8NHY3 880 aa17.2■□□□□ 0.34
BEST1-208ENST00000534553 RBM19Q9Y4C8 960 aaKnown RBP17.2■□□□□ 0.34
BEST1-208ENST00000534553 KDM2BQ8NHM5 1336 aa17.2■□□□□ 0.34
BEST1-208ENST00000534553 ATF3P18847 181 aa17.19■□□□□ 0.34
BEST1-208ENST00000534553 AEBP1Q8IUX7 1158 aa17.19■□□□□ 0.34
BEST1-208ENST00000534553 TMEM94Q12767 1356 aa17.19■□□□□ 0.34
BEST1-208ENST00000534553 DLG5Q8TDM6 1919 aa17.19■□□□□ 0.34
BEST1-208ENST00000534553 SLIT3O75094 1523 aa17.18■□□□□ 0.34
BEST1-208ENST00000534553 HTATSF1O43719 755 aaKnown RBP17.18■□□□□ 0.34
BEST1-208ENST00000534553 CADPS2Q86UW7 1296 aa17.18■□□□□ 0.34
BEST1-208ENST00000534553 CLUAP1Q96AJ1 413 aa17.18■□□□□ 0.34
BEST1-208ENST00000534553 IP6K1Q92551 441 aa17.17■□□□□ 0.34
BEST1-208ENST00000534553 ORAI2Q96SN7 254 aa17.17■□□□□ 0.34
BEST1-208ENST00000534553 EYA1Q99502 592 aa17.17■□□□□ 0.34
BEST1-208ENST00000534553 FTSJ3Q8IY81 847 aaKnown RBP17.17■□□□□ 0.34
BEST1-208ENST00000534553 SSH1Q8WYL5 1049 aa17.17■□□□□ 0.34
BEST1-208ENST00000534553 TRPM3Q9HCF6 1732 aaPredicted RBP17.16■□□□□ 0.34
BEST1-208ENST00000534553 NUTM2GQ5VZR2 741 aa17.16■□□□□ 0.34
BEST1-208ENST00000534553 DZIP1LQ8IYY4 767 aaKnown RBP17.16■□□□□ 0.34
BEST1-208ENST00000534553 LMTK3Q96Q04 1460 aa17.16■□□□□ 0.34
BEST1-208ENST00000534553 USP19O94966 1318 aa17.16■□□□□ 0.34
BEST1-208ENST00000534553 FOXO3O43524 673 aa17.15■□□□□ 0.34
BEST1-208ENST00000534553 ATF7IPQ6VMQ6 1270 aa17.15■□□□□ 0.34
BEST1-208ENST00000534553 RTF1Q92541 710 aaKnown RBP17.15■□□□□ 0.34
BEST1-208ENST00000534553 BCL2L13Q9BXK5 485 aa17.15■□□□□ 0.34
BEST1-208ENST00000534553 MBIPQ9NS73 344 aa17.15■□□□□ 0.34
BEST1-208ENST00000534553 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
BEST1-208ENST00000534553 MSH6P52701 1360 aa17.15■□□□□ 0.34
BEST1-208ENST00000534553 LTN1O94822 1766 aa17.15■□□□□ 0.34
BEST1-208ENST00000534553 MVPQ14764 893 aaKnown RBP17.14■□□□□ 0.34
BEST1-208ENST00000534553 PANK1Q8TE04 598 aa17.14■□□□□ 0.34
BEST1-208ENST00000534553 COG6Q9Y2V7 657 aa17.14■□□□□ 0.34
BEST1-208ENST00000534553 KRT28Q7Z3Y7 464 aa17.14■□□□□ 0.33
BEST1-208ENST00000534553 ARHGAP45Q92619 1136 aa17.14■□□□□ 0.33
BEST1-208ENST00000534553 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
BEST1-208ENST00000534553 KIAA0232Q92628 1395 aa17.13■□□□□ 0.33
BEST1-208ENST00000534553 STRCP1A6NGW2 1772 aa17.13■□□□□ 0.33
BEST1-208ENST00000534553 VAMP4O75379 141 aa17.12■□□□□ 0.33
BEST1-208ENST00000534553 THUMPD2Q9BTF0 503 aaKnown RBP17.12■□□□□ 0.33
BEST1-208ENST00000534553 DDX19BQ9UMR2 479 aa17.12■□□□□ 0.33
BEST1-208ENST00000534553 CHL1O00533 1208 aa17.12■□□□□ 0.33
BEST1-208ENST00000534553 GCP02774 474 aa17.12■□□□□ 0.33
BEST1-208ENST00000534553 NPHP3Q7Z494 1330 aa17.12■□□□□ 0.33
BEST1-208ENST00000534553 FAM83GA6ND36 823 aa17.11■□□□□ 0.33
BEST1-208ENST00000534553 TRIM27P14373 513 aa17.11■□□□□ 0.33
BEST1-208ENST00000534553 TWISTNBQ3B726 338 aaPredicted RBP17.11■□□□□ 0.33
BEST1-208ENST00000534553 HSPA2P54652 639 aa17.1■□□□□ 0.33
BEST1-208ENST00000534553 MTHFSDQ2M296 383 aaKnown RBP17.1■□□□□ 0.33
BEST1-208ENST00000534553 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
BEST1-208ENST00000534553 CRB1P82279 1406 aa17.1■□□□□ 0.33
BEST1-208ENST00000534553 RLBP1P12271 317 aa17.1■□□□□ 0.33
BEST1-208ENST00000534553 ARHGEF25Q86VW2 580 aa17.1■□□□□ 0.33
BEST1-208ENST00000534553 BABAM1Q9NWV8 329 aa17.1■□□□□ 0.33
BEST1-208ENST00000534553 NOB1Q9ULX3 412 aaKnown RBP17.1■□□□□ 0.33
BEST1-208ENST00000534553 NCAPD2Q15021 1401 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms