RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 HS1BP3Q53T59 392 aa23.88■■□□□ 1.41
SMPD1-210ENST00000534405 PNPLA6Q8IY17 1366 aa23.87■■□□□ 1.41
SMPD1-210ENST00000534405 FAM69CQ0P6D2 419 aa23.87■■□□□ 1.41
SMPD1-210ENST00000534405 SKOR2Q2VWA4 1001 aaPredicted RBP23.87■■□□□ 1.41
SMPD1-210ENST00000534405 WAPLQ7Z5K2 1190 aa23.87■■□□□ 1.41
SMPD1-210ENST00000534405 ZNF500O60304 480 aaPredicted RBP23.86■■□□□ 1.41
SMPD1-210ENST00000534405 DIAPH1O60610 1272 aaKnown RBP23.86■■□□□ 1.41
SMPD1-210ENST00000534405 DZIP1LQ8IYY4 767 aaKnown RBP23.86■■□□□ 1.41
SMPD1-210ENST00000534405 SSH1Q8WYL5 1049 aa23.86■■□□□ 1.41
SMPD1-210ENST00000534405 CCDC94Q9BW85 323 aaPredicted RBP23.86■■□□□ 1.41
SMPD1-210ENST00000534405 SMC4Q9NTJ3 1288 aa23.86■■□□□ 1.41
SMPD1-210ENST00000534405 NAP1L2Q9ULW6 460 aaPredicted RBP23.86■■□□□ 1.41
SMPD1-210ENST00000534405 CT47B1P0C2W7 299 aaPredicted RBP23.85■■□□□ 1.41
SMPD1-210ENST00000534405 TRIM27P14373 513 aa23.84■■□□□ 1.41
SMPD1-210ENST00000534405 KIF20BQ96Q89 1820 aa23.84■■□□□ 1.41
SMPD1-210ENST00000534405 FTSJ3Q8IY81 847 aaKnown RBP23.84■■□□□ 1.41
SMPD1-210ENST00000534405 PTMSP20962 102 aa23.83■■□□□ 1.41
SMPD1-210ENST00000534405 DDIT3P35638 169 aa23.83■■□□□ 1.41
SMPD1-210ENST00000534405 NASPP49321 788 aaPredicted RBP23.83■■□□□ 1.41
SMPD1-210ENST00000534405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.83■■□□□ 1.41
SMPD1-210ENST00000534405 RWDD1Q9H446 243 aaPredicted RBP23.83■■□□□ 1.41
SMPD1-210ENST00000534405 A2ML1A8K2U0 1454 aa23.83■■□□□ 1.41
SMPD1-210ENST00000534405 NCOA3Q9Y6Q9 1424 aa23.83■■□□□ 1.4
SMPD1-210ENST00000534405 KIF20AO95235 890 aa23.82■■□□□ 1.4
SMPD1-210ENST00000534405 PPP4R3BQ5MIZ7 849 aa23.82■■□□□ 1.4
SMPD1-210ENST00000534405 ANP32BQ92688 251 aaKnown RBP23.82■■□□□ 1.4
SMPD1-210ENST00000534405 TSPOAP1O95153 1857 aa23.81■■□□□ 1.4
SMPD1-210ENST00000534405 IL16Q14005 1332 aa23.81■■□□□ 1.4
SMPD1-210ENST00000534405 GTPBP4Q9BZE4 634 aaKnown RBP23.81■■□□□ 1.4
SMPD1-210ENST00000534405 NOL7Q9UMY1 257 aaKnown RBP23.8■■□□□ 1.4
SMPD1-210ENST00000534405 DIP2BQ9P265 1576 aa23.8■■□□□ 1.4
SMPD1-210ENST00000534405 SETD1AO15047 1707 aaKnown RBP23.8■■□□□ 1.4
SMPD1-210ENST00000534405 LRRC7Q96NW7 1537 aa23.79■■□□□ 1.4
SMPD1-210ENST00000534405 POLKQ9UBT6 870 aa23.79■■□□□ 1.4
SMPD1-210ENST00000534405 RIMS2Q9UQ26 1411 aa23.79■■□□□ 1.4
SMPD1-210ENST00000534405 NOB1Q9ULX3 412 aaKnown RBP23.79■■□□□ 1.4
SMPD1-210ENST00000534405 DLC1Q96QB1 1528 aa23.78■■□□□ 1.4
SMPD1-210ENST00000534405 ATF7IPQ6VMQ6 1270 aa23.78■■□□□ 1.4
SMPD1-210ENST00000534405 IBTKQ9P2D0 1353 aaPredicted RBP23.78■■□□□ 1.4
SMPD1-210ENST00000534405 AGLP35573 1532 aa23.77■■□□□ 1.4
SMPD1-210ENST00000534405 CDC42BPGQ6DT37 1551 aa23.77■■□□□ 1.4
SMPD1-210ENST00000534405 SPATA31D1Q6ZQQ2 1576 aa23.77■■□□□ 1.4
SMPD1-210ENST00000534405 CSPP1Q1MSJ5 1256 aa23.77■■□□□ 1.4
SMPD1-210ENST00000534405 IPO4Q8TEX9 1081 aaKnown RBP23.77■■□□□ 1.4
SMPD1-210ENST00000534405 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
SMPD1-210ENST00000534405 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
SMPD1-210ENST00000534405 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
SMPD1-210ENST00000534405 REREQ9P2R6 1566 aa23.77■■□□□ 1.4
SMPD1-210ENST00000534405 MLECQ14165 292 aa23.76■■□□□ 1.39
SMPD1-210ENST00000534405 GBP4Q96PP9 640 aa23.76■■□□□ 1.39
SMPD1-210ENST00000534405 FCHSD2O94868 740 aa23.76■■□□□ 1.39
SMPD1-210ENST00000534405 PRKAR2BP31323 418 aa23.76■■□□□ 1.39
SMPD1-210ENST00000534405 ITPRIPQ8IWB1 547 aa23.76■■□□□ 1.39
SMPD1-210ENST00000534405 TNPO1Q92973 898 aaKnown RBP23.76■■□□□ 1.39
SMPD1-210ENST00000534405 ATP7BP35670 1465 aa23.76■■□□□ 1.39
SMPD1-210ENST00000534405 TAF7LQ5H9L4 462 aa23.75■■□□□ 1.39
SMPD1-210ENST00000534405 ARID3AQ99856 593 aa23.75■■□□□ 1.39
SMPD1-210ENST00000534405 FAM135BQ49AJ0 1406 aa23.75■■□□□ 1.39
SMPD1-210ENST00000534405 SASS6Q6UVJ0 657 aa23.74■■□□□ 1.39
SMPD1-210ENST00000534405 TMEM57Q8N5G2 664 aa23.74■■□□□ 1.39
SMPD1-210ENST00000534405 CIZ1Q9ULV3 898 aaPredicted RBP23.74■■□□□ 1.39
SMPD1-210ENST00000534405 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.74■■□□□ 1.39
SMPD1-210ENST00000534405 LETM1O95202 739 aaPredicted RBP23.73■■□□□ 1.39
SMPD1-210ENST00000534405 C22orf23Q9BZE7 217 aa23.73■■□□□ 1.39
SMPD1-210ENST00000534405 DDX19BQ9UMR2 479 aa23.73■■□□□ 1.39
SMPD1-210ENST00000534405 HSCBQ8IWL3 235 aa23.73■■□□□ 1.39
SMPD1-210ENST00000534405 PHACTR3Q96KR7 559 aa23.73■■□□□ 1.39
SMPD1-210ENST00000534405 TMEM51Q9NW97 253 aa23.73■■□□□ 1.39
SMPD1-210ENST00000534405 PPP6R1Q9UPN7 881 aa23.73■■□□□ 1.39
SMPD1-210ENST00000534405 MAP2P11137 1827 aaKnown RBP23.73■■□□□ 1.39
SMPD1-210ENST00000534405 EMILIN1Q9Y6C2 1016 aa23.72■■□□□ 1.39
SMPD1-210ENST00000534405 HMOX1P09601 288 aa23.72■■□□□ 1.39
SMPD1-210ENST00000534405 CHMP4BQ9H444 224 aaKnown RBP23.72■■□□□ 1.39
SMPD1-210ENST00000534405 NRXN3Q9Y4C0 1643 aa23.72■■□□□ 1.39
SMPD1-210ENST00000534405 XPCQ01831 940 aaPredicted RBP23.71■■□□□ 1.39
SMPD1-210ENST00000534405 HDAC1Q13547 482 aaPredicted RBP23.71■■□□□ 1.39
SMPD1-210ENST00000534405 ZRANB1Q9UGI0 708 aa23.71■■□□□ 1.39
SMPD1-210ENST00000534405 METP08581 1390 aa23.71■■□□□ 1.39
SMPD1-210ENST00000534405 RAB3GAP1Q15042 981 aa23.7■■□□□ 1.38
SMPD1-210ENST00000534405 CPSF1Q10570 1443 aaKnown RBP23.7■■□□□ 1.38
SMPD1-210ENST00000534405 MCM5P33992 734 aa23.7■■□□□ 1.38
SMPD1-210ENST00000534405 NME9Q86XW9 330 aa23.7■■□□□ 1.38
SMPD1-210ENST00000534405 THUMPD2Q9BTF0 503 aaKnown RBP23.7■■□□□ 1.38
SMPD1-210ENST00000534405 NCKAP5LQ9HCH0 1330 aa23.69■■□□□ 1.38
SMPD1-210ENST00000534405 WASLO00401 505 aaPredicted RBP23.69■■□□□ 1.38
SMPD1-210ENST00000534405 PDLIM2Q96JY6 352 aa23.69■■□□□ 1.38
SMPD1-210ENST00000534405 ZBTB40Q9NUA8 1239 aa23.69■■□□□ 1.38
SMPD1-210ENST00000534405 PPIP5K1Q6PFW1 1433 aa23.68■■□□□ 1.38
SMPD1-210ENST00000534405 SMC5Q8IY18 1101 aa23.68■■□□□ 1.38
SMPD1-210ENST00000534405 KIF16BQ96L93 1317 aa23.67■■□□□ 1.38
SMPD1-210ENST00000534405 TXNDC2Q86VQ3 553 aa23.67■■□□□ 1.38
SMPD1-210ENST00000534405 ZKSCAN5Q9Y2L8 839 aa23.67■■□□□ 1.38
SMPD1-210ENST00000534405 EDC4Q6P2E9 1401 aaKnown RBP23.66■■□□□ 1.38
SMPD1-210ENST00000534405 ALDH1L2Q3SY69 923 aa23.66■■□□□ 1.38
SMPD1-210ENST00000534405 IL13P35225 146 aa23.65■■□□□ 1.38
SMPD1-210ENST00000534405 NFE2L2Q16236 605 aa23.65■■□□□ 1.38
SMPD1-210ENST00000534405 SNX21Q969T3 373 aa23.64■■□□□ 1.38
SMPD1-210ENST00000534405 IPO8O15397 1037 aaKnown RBP23.64■■□□□ 1.37
SMPD1-210ENST00000534405 TAF3Q5VWG9 929 aa23.63■■□□□ 1.37
SMPD1-210ENST00000534405 CPS1P31327 1500 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms