RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 COG3Q96JB2 828 aa22.84■■□□□ 1.25
UBXN1-213ENST00000532904 BCL2L13Q9BXK5 485 aa22.84■■□□□ 1.25
UBXN1-213ENST00000532904 ANO8Q9HCE9 1232 aaPredicted RBP22.84■■□□□ 1.25
UBXN1-213ENST00000532904 CHD2O14647 1828 aaKnown RBP22.83■■□□□ 1.25
UBXN1-213ENST00000532904 U2SURPO15042 1029 aaKnown RBP22.83■■□□□ 1.24
UBXN1-213ENST00000532904 ANKLE2Q86XL3 938 aa22.83■■□□□ 1.24
UBXN1-213ENST00000532904 USP6P35125 1406 aa22.82■■□□□ 1.24
UBXN1-213ENST00000532904 CT47B1P0C2W7 299 aaPredicted RBP22.82■■□□□ 1.24
UBXN1-213ENST00000532904 MVPQ14764 893 aaKnown RBP22.82■■□□□ 1.24
UBXN1-213ENST00000532904 ACEP12821 1306 aa22.82■■□□□ 1.24
UBXN1-213ENST00000532904 ANTXR1Q9H6X2 564 aa22.81■■□□□ 1.24
UBXN1-213ENST00000532904 ANKARQ7Z5J8 1434 aa22.81■■□□□ 1.24
UBXN1-213ENST00000532904 FCHSD2O94868 740 aa22.81■■□□□ 1.24
UBXN1-213ENST00000532904 TTC21BQ7Z4L5 1316 aa22.81■■□□□ 1.24
UBXN1-213ENST00000532904 SSH2Q76I76 1423 aa22.8■■□□□ 1.24
UBXN1-213ENST00000532904 NALCNQ8IZF0 1738 aa22.8■■□□□ 1.24
UBXN1-213ENST00000532904 ZKSCAN2Q63HK3 967 aa22.8■■□□□ 1.24
UBXN1-213ENST00000532904 FMN2Q9NZ56 1722 aa22.78■■□□□ 1.24
UBXN1-213ENST00000532904 OVOS2A0A0J9YW53 1432 aa22.78■■□□□ 1.24
UBXN1-213ENST00000532904 OVOS2Q6IE36 1432 aa22.78■■□□□ 1.24
UBXN1-213ENST00000532904 RGPD8O14715 1765 aaPredicted RBP22.77■■□□□ 1.24
UBXN1-213ENST00000532904 TMPOP42166 694 aaKnown RBP22.77■■□□□ 1.24
UBXN1-213ENST00000532904 DZIP1LQ8IYY4 767 aaKnown RBP22.77■■□□□ 1.24
UBXN1-213ENST00000532904 SLKQ9H2G2 1235 aaPredicted RBP22.77■■□□□ 1.23
UBXN1-213ENST00000532904 TTC21AQ8NDW8 1320 aa22.76■■□□□ 1.23
UBXN1-213ENST00000532904 LRRC7Q96NW7 1537 aa22.76■■□□□ 1.23
UBXN1-213ENST00000532904 KCNA6P17658 529 aa22.76■■□□□ 1.23
UBXN1-213ENST00000532904 TBC1D2Q9BYX2 928 aa22.76■■□□□ 1.23
UBXN1-213ENST00000532904 ZRANB1Q9UGI0 708 aa22.76■■□□□ 1.23
UBXN1-213ENST00000532904 EMILIN1Q9Y6C2 1016 aa22.75■■□□□ 1.23
UBXN1-213ENST00000532904 IL16Q14005 1332 aa22.75■■□□□ 1.23
UBXN1-213ENST00000532904 FTSJ3Q8IY81 847 aaKnown RBP22.74■■□□□ 1.23
UBXN1-213ENST00000532904 IL13P35225 146 aa22.73■■□□□ 1.23
UBXN1-213ENST00000532904 USP31Q70CQ4 1352 aa22.73■■□□□ 1.23
UBXN1-213ENST00000532904 RSPH6AQ9H0K4 717 aa22.73■■□□□ 1.23
UBXN1-213ENST00000532904 FBLN1P23142 703 aa22.72■■□□□ 1.23
UBXN1-213ENST00000532904 HDAC1Q13547 482 aaPredicted RBP22.72■■□□□ 1.23
UBXN1-213ENST00000532904 TRIM35Q9UPQ4 493 aa22.72■■□□□ 1.23
UBXN1-213ENST00000532904 NUTM2FA1L443 756 aa22.7■■□□□ 1.23
UBXN1-213ENST00000532904 TSR2Q969E8 191 aaKnown RBP22.7■■□□□ 1.23
UBXN1-213ENST00000532904 EXOSC9Q06265 439 aaKnown RBP22.7■■□□□ 1.22
UBXN1-213ENST00000532904 SMC4Q9NTJ3 1288 aa22.7■■□□□ 1.22
UBXN1-213ENST00000532904 TRIM27P14373 513 aa22.69■■□□□ 1.22
UBXN1-213ENST00000532904 FAM43AQ8N2R8 423 aa22.69■■□□□ 1.22
UBXN1-213ENST00000532904 DDX19BQ9UMR2 479 aa22.69■■□□□ 1.22
UBXN1-213ENST00000532904 USP54Q70EL1 1684 aa22.68■■□□□ 1.22
UBXN1-213ENST00000532904 NPHP4O75161 1426 aaPredicted RBP22.68■■□□□ 1.22
UBXN1-213ENST00000532904 PRKAR2BP31323 418 aa22.67■■□□□ 1.22
UBXN1-213ENST00000532904 RIPK4P57078 832 aa22.67■■□□□ 1.22
UBXN1-213ENST00000532904 RRS1Q15050 365 aaKnown RBP22.67■■□□□ 1.22
UBXN1-213ENST00000532904 SSH1Q8WYL5 1049 aa22.67■■□□□ 1.22
UBXN1-213ENST00000532904 ATF7IPQ6VMQ6 1270 aa22.66■■□□□ 1.22
UBXN1-213ENST00000532904 NGDNQ8NEJ9 315 aaKnown RBP22.66■■□□□ 1.22
UBXN1-213ENST00000532904 L1TD1Q5T7N2 865 aaKnown RBP22.65■■□□□ 1.22
UBXN1-213ENST00000532904 C22orf23Q9BZE7 217 aa22.65■■□□□ 1.22
UBXN1-213ENST00000532904 SMC5Q8IY18 1101 aa22.64■■□□□ 1.22
UBXN1-213ENST00000532904 PIK3C2AO00443 1686 aa22.64■■□□□ 1.22
UBXN1-213ENST00000532904 NFE2L2Q16236 605 aa22.64■■□□□ 1.21
UBXN1-213ENST00000532904 PEAK1Q9H792 1746 aa22.63■■□□□ 1.21
UBXN1-213ENST00000532904 ITPRIPQ8IWB1 547 aa22.63■■□□□ 1.21
UBXN1-213ENST00000532904 ADGRL3Q9HAR2 1447 aa22.63■■□□□ 1.21
UBXN1-213ENST00000532904 NWD1Q149M9 1564 aa22.63■■□□□ 1.21
UBXN1-213ENST00000532904 NOB1Q9ULX3 412 aaKnown RBP22.62■■□□□ 1.21
UBXN1-213ENST00000532904 RGPD1P0DJD0 1748 aa22.62■■□□□ 1.21
UBXN1-213ENST00000532904 MFAP1P55081 439 aaKnown RBP22.61■■□□□ 1.21
UBXN1-213ENST00000532904 ZBTB40Q9NUA8 1239 aa22.6■■□□□ 1.21
UBXN1-213ENST00000532904 DLG5Q8TDM6 1919 aa22.6■■□□□ 1.21
UBXN1-213ENST00000532904 HMOX1P09601 288 aa22.59■■□□□ 1.21
UBXN1-213ENST00000532904 MCM4P33991 863 aa22.59■■□□□ 1.21
UBXN1-213ENST00000532904 CALD1Q05682 793 aaKnown RBP22.59■■□□□ 1.21
UBXN1-213ENST00000532904 KIF16BQ96L93 1317 aa22.59■■□□□ 1.21
UBXN1-213ENST00000532904 TMEM57Q8N5G2 664 aa22.59■■□□□ 1.21
UBXN1-213ENST00000532904 PHACTR3Q96KR7 559 aa22.59■■□□□ 1.21
UBXN1-213ENST00000532904 CHMP5Q9NZZ3 219 aa22.59■■□□□ 1.21
UBXN1-213ENST00000532904 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.59■■□□□ 1.21
UBXN1-213ENST00000532904 MARF1Q9Y4F3 1742 aaKnown RBP22.59■■□□□ 1.21
UBXN1-213ENST00000532904 EIF4A2Q14240 407 aaKnown RBP22.58■■□□□ 1.21
UBXN1-213ENST00000532904 IPO8O15397 1037 aaKnown RBP22.58■■□□□ 1.2
UBXN1-213ENST00000532904 LMOD3Q0VAK6 560 aa22.57■■□□□ 1.2
UBXN1-213ENST00000532904 SBNO1A3KN83 1393 aa22.57■■□□□ 1.2
UBXN1-213ENST00000532904 KIF24Q5T7B8 1368 aa22.57■■□□□ 1.2
UBXN1-213ENST00000532904 ALDH1L2Q3SY69 923 aa22.56■■□□□ 1.2
UBXN1-213ENST00000532904 FLT4P35916 1363 aa22.55■■□□□ 1.2
UBXN1-213ENST00000532904 SPRYD3Q8NCJ5 442 aa22.55■■□□□ 1.2
UBXN1-213ENST00000532904 NUCB1Q02818 461 aa22.54■■□□□ 1.2
UBXN1-213ENST00000532904 PHF8Q9UPP1 1060 aa22.54■■□□□ 1.2
UBXN1-213ENST00000532904 MAP3K19Q56UN5 1328 aa22.53■■□□□ 1.2
UBXN1-213ENST00000532904 FSD2A1L4K1 749 aa22.53■■□□□ 1.2
UBXN1-213ENST00000532904 ARHGEF10O15013 1369 aa22.53■■□□□ 1.2
UBXN1-213ENST00000532904 ZNF428Q96B54 188 aa22.53■■□□□ 1.2
UBXN1-213ENST00000532904 HSCBQ8IWL3 235 aa22.52■■□□□ 1.2
UBXN1-213ENST00000532904 RBM25P49756 843 aaKnown RBP22.51■■□□□ 1.19
UBXN1-213ENST00000532904 BRPF1P55201 1214 aaPredicted RBP22.51■■□□□ 1.19
UBXN1-213ENST00000532904 IFT57Q9NWB7 429 aa22.51■■□□□ 1.19
UBXN1-213ENST00000532904 NCOA3Q9Y6Q9 1424 aa22.51■■□□□ 1.19
UBXN1-213ENST00000532904 HSP90AB2PQ58FF8 381 aa22.51■■□□□ 1.19
UBXN1-213ENST00000532904 GOLGA6L3A6NEY3 463 aa22.5■■□□□ 1.19
UBXN1-213ENST00000532904 NLRP6P59044 892 aa22.5■■□□□ 1.19
UBXN1-213ENST00000532904 GNAI1P63096 354 aa22.5■■□□□ 1.19
UBXN1-213ENST00000532904 ZNF853P0CG23 659 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms