RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 DIAPH3Q9NSV4 1193 aa8.33□□□□□ -1.08
TGFBR3-209ENST00000532540 SKAP1Q86WV1 359 aa8.33□□□□□ -1.08
TGFBR3-209ENST00000532540 CCDC94Q9BW85 323 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-209ENST00000532540 BCL2L13Q9BXK5 485 aa8.33□□□□□ -1.08
TGFBR3-209ENST00000532540 FOXD4L1Q9NU39 408 aa8.33□□□□□ -1.08
TGFBR3-209ENST00000532540 HSP90AB2PQ58FF8 381 aa8.32□□□□□ -1.08
TGFBR3-209ENST00000532540 KAT6BQ8WYB5 2073 aa8.32□□□□□ -1.08
TGFBR3-209ENST00000532540 E9PSI1 815 aa8.32□□□□□ -1.08
TGFBR3-209ENST00000532540 TERF1P54274 439 aa8.32□□□□□ -1.08
TGFBR3-209ENST00000532540 CHMP4AQ9BY43 222 aa8.32□□□□□ -1.08
TGFBR3-209ENST00000532540 ADAMTS8Q9UP79 889 aa8.32□□□□□ -1.08
TGFBR3-209ENST00000532540 MAP3K4Q9Y6R4 1608 aa8.32□□□□□ -1.08
TGFBR3-209ENST00000532540 EFCAB6Q5THR3 1501 aa8.32□□□□□ -1.08
TGFBR3-209ENST00000532540 PPP2R1AP30153 589 aa8.32□□□□□ -1.08
TGFBR3-209ENST00000532540 LRRC59Q96AG4 307 aaKnown RBP8.32□□□□□ -1.08
TGFBR3-209ENST00000532540 RWDD1Q9H446 243 aaPredicted RBP8.32□□□□□ -1.08
TGFBR3-209ENST00000532540 SCAF11Q99590 1463 aaKnown RBP8.31□□□□□ -1.08
TGFBR3-209ENST00000532540 ZNF692Q9BU19 519 aaPredicted RBP8.31□□□□□ -1.08
TGFBR3-209ENST00000532540 FYB1O15117 783 aa8.31□□□□□ -1.08
TGFBR3-209ENST00000532540 KCNJ4P48050 445 aa8.31□□□□□ -1.08
TGFBR3-209ENST00000532540 THUMPD2Q9BTF0 503 aaKnown RBP8.31□□□□□ -1.08
TGFBR3-209ENST00000532540 A2ML1A8K2U0 1454 aa8.31□□□□□ -1.08
TGFBR3-209ENST00000532540 MYBBP1AQ9BQG0 1328 aaKnown RBP8.31□□□□□ -1.08
TGFBR3-209ENST00000532540 TULP1O00294 542 aaPredicted RBP8.31□□□□□ -1.08
TGFBR3-209ENST00000532540 FTSJ3Q8IY81 847 aaKnown RBP8.31□□□□□ -1.08
TGFBR3-209ENST00000532540 PDCL2Q8N4E4 241 aa8.31□□□□□ -1.08
TGFBR3-209ENST00000532540 RAPGEF4Q8WZA2 1011 aa8.31□□□□□ -1.08
TGFBR3-209ENST00000532540 TSPYL1Q9H0U9 437 aa8.31□□□□□ -1.08
TGFBR3-209ENST00000532540 DNAJC2Q99543 621 aaKnown RBP8.3□□□□□ -1.08
TGFBR3-209ENST00000532540 SPATA31E1Q6ZUB1 1445 aa8.3□□□□□ -1.08
TGFBR3-209ENST00000532540 CLTCQ00610 1675 aaKnown RBP8.3□□□□□ -1.08
TGFBR3-209ENST00000532540 DCTN1Q14203 1278 aa8.3□□□□□ -1.08
TGFBR3-209ENST00000532540 TPRNQ4KMQ1 711 aa8.3□□□□□ -1.08
TGFBR3-209ENST00000532540 GOLGA6L1Q8N7Z2 621 aa8.3□□□□□ -1.08
TGFBR3-209ENST00000532540 KIF3AQ9Y496 699 aa8.3□□□□□ -1.08
TGFBR3-209ENST00000532540 PRKAR2BP31323 418 aa8.3□□□□□ -1.08
TGFBR3-209ENST00000532540 FAM182BQ5T319 152 aa8.3□□□□□ -1.08
TGFBR3-209ENST00000532540 ATAD2Q6PL18 1390 aa8.3□□□□□ -1.08
TGFBR3-209ENST00000532540 PPIP5K1Q6PFW1 1433 aa8.3□□□□□ -1.08
TGFBR3-209ENST00000532540 FRMPD1Q5SYB0 1578 aa8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 GOLGA2Q08379 1002 aa8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 NPHP1O15259 732 aa8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 UTP14CQ5TAP6 766 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 C22orf23Q9BZE7 217 aa8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 MIS18AQ9NYP9 233 aa8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 TTC21BQ7Z4L5 1316 aa8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 PRR36Q9H6K5 1346 aa8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 CEP152O94986 1710 aa8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 NPHP3Q7Z494 1330 aa8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 LRPPRCP42704 1394 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 ARHGEF40Q8TER5 1519 aa8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 RIMS1Q86UR5 1692 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 ADGBQ8N7X0 1667 aa8.29□□□□□ -1.08
TGFBR3-209ENST00000532540 EIF2S2P20042 333 aaKnown RBP8.28□□□□□ -1.08
TGFBR3-209ENST00000532540 KDM5CP41229 1560 aa8.28□□□□□ -1.08
TGFBR3-209ENST00000532540 MADDQ8WXG6 1647 aa8.28□□□□□ -1.08
TGFBR3-209ENST00000532540 INO80Q9ULG1 1556 aaPredicted RBP8.28□□□□□ -1.08
TGFBR3-209ENST00000532540 DRC7Q8IY82 874 aa8.28□□□□□ -1.08
TGFBR3-209ENST00000532540 CLUAP1Q96AJ1 413 aa8.28□□□□□ -1.08
TGFBR3-209ENST00000532540 PTPRTO14522 1441 aa8.28□□□□□ -1.08
TGFBR3-209ENST00000532540 PHF14O94880 888 aa8.28□□□□□ -1.08
TGFBR3-209ENST00000532540 RIPK4P57078 832 aa8.28□□□□□ -1.08
TGFBR3-209ENST00000532540 CALCOCO1Q9P1Z2 691 aa8.28□□□□□ -1.08
TGFBR3-209ENST00000532540 GCP02774 474 aa8.27□□□□□ -1.08
TGFBR3-209ENST00000532540 DMTNQ08495 405 aa8.27□□□□□ -1.08
TGFBR3-209ENST00000532540 PNISRQ8TF01 805 aaKnown RBP8.27□□□□□ -1.08
TGFBR3-209ENST00000532540 MCM5P33992 734 aa8.27□□□□□ -1.09
TGFBR3-209ENST00000532540 C1orf141Q5JVX7 400 aa8.27□□□□□ -1.09
TGFBR3-209ENST00000532540 PLEKHG1Q9ULL1 1385 aa8.27□□□□□ -1.09
TGFBR3-209ENST00000532540 HTATSF1O43719 755 aaKnown RBP8.27□□□□□ -1.09
TGFBR3-209ENST00000532540 TIGD1Q96MW7 591 aa8.27□□□□□ -1.09
TGFBR3-209ENST00000532540 BTG4Q9NY30 223 aa8.27□□□□□ -1.09
TGFBR3-209ENST00000532540 TEX35Q5T0J7 233 aa8.26□□□□□ -1.09
TGFBR3-209ENST00000532540 CAVIN1Q6NZI2 390 aaKnown RBP8.26□□□□□ -1.09
TGFBR3-209ENST00000532540 CDCA7LQ96GN5 454 aa8.26□□□□□ -1.09
TGFBR3-209ENST00000532540 PLXNC1O60486 1568 aa8.26□□□□□ -1.09
TGFBR3-209ENST00000532540 TEFQ10587 303 aa8.26□□□□□ -1.09
TGFBR3-209ENST00000532540 A0A1W2PP64 1363 aa8.26□□□□□ -1.09
TGFBR3-209ENST00000532540 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
TGFBR3-209ENST00000532540 GCC2Q8IWJ2 1684 aa8.26□□□□□ -1.09
TGFBR3-209ENST00000532540 BRINP3Q76B58 766 aa8.25□□□□□ -1.09
TGFBR3-209ENST00000532540 NLRP1Q9C000 1473 aa8.25□□□□□ -1.09
TGFBR3-209ENST00000532540 SPDYE4A6NLX3 237 aa8.25□□□□□ -1.09
TGFBR3-209ENST00000532540 CIZ1Q9ULV3 898 aaPredicted RBP8.25□□□□□ -1.09
TGFBR3-209ENST00000532540 ARHGAP31Q2M1Z3 1444 aa8.25□□□□□ -1.09
TGFBR3-209ENST00000532540 PTCD1O75127 700 aaKnown RBP8.25□□□□□ -1.09
TGFBR3-209ENST00000532540 GPS2Q13227 327 aa8.25□□□□□ -1.09
TGFBR3-209ENST00000532540 TCP11L2Q8N4U5 519 aa8.25□□□□□ -1.09
TGFBR3-209ENST00000532540 RNF214Q8ND24 703 aa8.25□□□□□ -1.09
TGFBR3-209ENST00000532540 CERKQ8TCT0 537 aa8.25□□□□□ -1.09
TGFBR3-209ENST00000532540 ACSBG1Q96GR2 724 aa8.25□□□□□ -1.09
TGFBR3-209ENST00000532540 CLTCL1P53675 1640 aa8.25□□□□□ -1.09
TGFBR3-209ENST00000532540 MCTP1Q6DN14 999 aa8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 CASC1Q6TDU7 716 aa8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 ABCC11Q96J66 1382 aa8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 ERICH4A6NGS2 130 aa8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 ZNF530Q6P9A1 599 aaPredicted RBP8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 MCM10Q7L590 875 aa8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 RBM42Q9BTD8 480 aaKnown RBP8.24□□□□□ -1.09
TGFBR3-209ENST00000532540 RNF123Q5XPI4 1314 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms