RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 KDM5CP41229 1560 aa7.71□□□□□ -1.17
PCF11-205ENST00000530906 ASXL2Q76L83 1435 aa7.71□□□□□ -1.17
PCF11-205ENST00000530906 TESPA1A2RU30 521 aaPredicted RBP7.71□□□□□ -1.18
PCF11-205ENST00000530906 OATP04181 439 aa7.71□□□□□ -1.18
PCF11-205ENST00000530906 HIC1Q14526 733 aa7.71□□□□□ -1.18
PCF11-205ENST00000530906 METTL3Q86U44 580 aaKnown RBP7.71□□□□□ -1.18
PCF11-205ENST00000530906 ANKLE1Q8NAG6 615 aa7.71□□□□□ -1.18
PCF11-205ENST00000530906 YTHDC1Q96MU7 727 aaKnown RBP7.71□□□□□ -1.18
PCF11-205ENST00000530906 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.18
PCF11-205ENST00000530906 SPAG9O60271 1321 aaKnown RBP7.71□□□□□ -1.18
PCF11-205ENST00000530906 TET3O43151 1660 aa7.7□□□□□ -1.18
PCF11-205ENST00000530906 PPEF1O14829 653 aaPredicted RBP7.7□□□□□ -1.18
PCF11-205ENST00000530906 S1PR4O95977 384 aa7.7□□□□□ -1.18
PCF11-205ENST00000530906 NBPF8Q3BBV2 869 aa7.7□□□□□ -1.18
PCF11-205ENST00000530906 RBM26Q5T8P6 1007 aaKnown RBP7.7□□□□□ -1.18
PCF11-205ENST00000530906 VWDEQ8N2E2 1590 aa7.7□□□□□ -1.18
PCF11-205ENST00000530906 WASHC2AQ641Q2 1341 aa7.7□□□□□ -1.18
PCF11-205ENST00000530906 USP47Q96K76 1375 aa7.7□□□□□ -1.18
PCF11-205ENST00000530906 TRAPPC8Q9Y2L5 1435 aa7.69□□□□□ -1.18
PCF11-205ENST00000530906 ADGRL1O94910 1474 aa7.69□□□□□ -1.18
PCF11-205ENST00000530906 ZNF518AQ6AHZ1 1483 aa7.69□□□□□ -1.18
PCF11-205ENST00000530906 TRPM2O94759 1503 aa7.69□□□□□ -1.18
PCF11-205ENST00000530906 PRDM15P57071 1507 aaPredicted RBP7.69□□□□□ -1.18
PCF11-205ENST00000530906 GPR37O15354 613 aa7.69□□□□□ -1.18
PCF11-205ENST00000530906 ADH1BP00325 375 aa7.69□□□□□ -1.18
PCF11-205ENST00000530906 FECHP22830 423 aa7.69□□□□□ -1.18
PCF11-205ENST00000530906 SPRYD7Q5W111 196 aa7.69□□□□□ -1.18
PCF11-205ENST00000530906 LIAT1Q6ZQX7 453 aa7.69□□□□□ -1.18
PCF11-205ENST00000530906 KANK1Q14678 1352 aa7.69□□□□□ -1.18
PCF11-205ENST00000530906 GPRASP1Q5JY77 1395 aa7.69□□□□□ -1.18
PCF11-205ENST00000530906 BCORL1Q5H9F3 1711 aa7.69□□□□□ -1.18
PCF11-205ENST00000530906 TRPM1Q7Z4N2 1603 aa7.68□□□□□ -1.18
PCF11-205ENST00000530906 NR1I2O75469 434 aa7.68□□□□□ -1.18
PCF11-205ENST00000530906 ZNF598Q86UK7 904 aaKnown RBP7.68□□□□□ -1.18
PCF11-205ENST00000530906 SCUBE3Q8IX30 993 aa7.68□□□□□ -1.18
PCF11-205ENST00000530906 KTN1Q86UP2 1357 aaKnown RBP7.68□□□□□ -1.18
PCF11-205ENST00000530906 PRAG1Q86YV5 1406 aa7.68□□□□□ -1.18
PCF11-205ENST00000530906 PLA2R1Q13018 1463 aa7.68□□□□□ -1.18
PCF11-205ENST00000530906 NEO1Q92859 1461 aa7.68□□□□□ -1.18
PCF11-205ENST00000530906 DHX29Q7Z478 1369 aaKnown RBP7.67□□□□□ -1.18
PCF11-205ENST00000530906 PTPRTO14522 1441 aa7.67□□□□□ -1.18
PCF11-205ENST00000530906 LMTK2Q8IWU2 1503 aa7.67□□□□□ -1.18
PCF11-205ENST00000530906 RNF17Q9BXT8 1623 aaKnown RBP7.67□□□□□ -1.18
PCF11-205ENST00000530906 CEP152O94986 1710 aa7.66□□□□□ -1.18
PCF11-205ENST00000530906 SPHKAPQ2M3C7 1700 aa7.66□□□□□ -1.18
PCF11-205ENST00000530906 GNPATO15228 680 aa7.66□□□□□ -1.18
PCF11-205ENST00000530906 PLA2G2CQ5R387 149 aa7.66□□□□□ -1.18
PCF11-205ENST00000530906 SCAPERQ9BY12 1400 aa7.66□□□□□ -1.18
PCF11-205ENST00000530906 MLH3Q9UHC1 1453 aa7.66□□□□□ -1.18
PCF11-205ENST00000530906 E9PCH4 1651 aa7.66□□□□□ -1.18
PCF11-205ENST00000530906 PRR20EP86478 221 aa7.65□□□□□ -1.18
PCF11-205ENST00000530906 PRR20CP86479 221 aa7.65□□□□□ -1.18
PCF11-205ENST00000530906 PRR20DP86480 221 aa7.65□□□□□ -1.18
PCF11-205ENST00000530906 PRR20BP86481 221 aa7.65□□□□□ -1.18
PCF11-205ENST00000530906 PRR20AP86496 221 aa7.65□□□□□ -1.18
PCF11-205ENST00000530906 KIF7Q2M1P5 1343 aa7.65□□□□□ -1.18
PCF11-205ENST00000530906 PUS10Q3MIT2 529 aaKnown RBP7.65□□□□□ -1.18
PCF11-205ENST00000530906 POGZQ7Z3K3 1410 aa7.65□□□□□ -1.18
PCF11-205ENST00000530906 SLC6A16Q9GZN6 736 aa7.65□□□□□ -1.18
PCF11-205ENST00000530906 KIDINS220Q9ULH0 1771 aa7.64□□□□□ -1.19
PCF11-205ENST00000530906 KIAA1210Q9ULL0 1709 aa7.64□□□□□ -1.19
PCF11-205ENST00000530906 GLI2P10070 1586 aa7.64□□□□□ -1.19
PCF11-205ENST00000530906 HECW2Q9P2P5 1572 aa7.64□□□□□ -1.19
PCF11-205ENST00000530906 A2MP01023 1474 aa7.64□□□□□ -1.19
PCF11-205ENST00000530906 CD109Q6YHK3 1445 aa7.64□□□□□ -1.19
PCF11-205ENST00000530906 SLC24A1O60721 1099 aa7.64□□□□□ -1.19
PCF11-205ENST00000530906 PLCB2Q00722 1185 aa7.64□□□□□ -1.19
PCF11-205ENST00000530906 ZNF787Q6DD87 383 aa7.64□□□□□ -1.19
PCF11-205ENST00000530906 HIRIP3Q9BW71 556 aaPredicted RBP7.64□□□□□ -1.19
PCF11-205ENST00000530906 CARD11Q9BXL7 1154 aa7.64□□□□□ -1.19
PCF11-205ENST00000530906 MROH1Q8NDA8 1641 aa7.63□□□□□ -1.19
PCF11-205ENST00000530906 EFCAB6Q5THR3 1501 aa7.63□□□□□ -1.19
PCF11-205ENST00000530906 GDF9O60383 454 aa7.63□□□□□ -1.19
PCF11-205ENST00000530906 ZNF697Q5TEC3 545 aa7.63□□□□□ -1.19
PCF11-205ENST00000530906 SMYD5Q6GMV2 418 aa7.63□□□□□ -1.19
PCF11-205ENST00000530906 DAXXQ9UER7 740 aaPredicted RBP7.63□□□□□ -1.19
PCF11-205ENST00000530906 DGAT1O75907 488 aa7.62□□□□□ -1.19
PCF11-205ENST00000530906 MYT1Q01538 1121 aa7.62□□□□□ -1.19
PCF11-205ENST00000530906 AFAP1Q8N556 730 aa7.62□□□□□ -1.19
PCF11-205ENST00000530906 DCAF11Q8TEB1 546 aa7.62□□□□□ -1.19
PCF11-205ENST00000530906 PHOX2BQ99453 314 aa7.62□□□□□ -1.19
PCF11-205ENST00000530906 SPSB2Q99619 263 aa7.62□□□□□ -1.19
PCF11-205ENST00000530906 PRKRIP1Q9H875 184 aaPredicted RBP7.62□□□□□ -1.19
PCF11-205ENST00000530906 MYOM2P54296 1465 aa7.62□□□□□ -1.19
PCF11-205ENST00000530906 WASHC2CQ9Y4E1 1318 aa7.61□□□□□ -1.19
PCF11-205ENST00000530906 MADDQ8WXG6 1647 aa7.61□□□□□ -1.19
PCF11-205ENST00000530906 MORN1Q5T089 497 aa7.61□□□□□ -1.19
PCF11-205ENST00000530906 NLRP7Q8WX94 980 aa7.61□□□□□ -1.19
PCF11-205ENST00000530906 THAP11Q96EK4 314 aa7.61□□□□□ -1.19
PCF11-205ENST00000530906 ZC3H13Q5T200 1668 aaKnown RBP7.6□□□□□ -1.19
PCF11-205ENST00000530906 CLTCL1P53675 1640 aa7.6□□□□□ -1.19
PCF11-205ENST00000530906 MAP3K4Q9Y6R4 1608 aa7.6□□□□□ -1.19
PCF11-205ENST00000530906 FUT2Q10981 343 aa7.6□□□□□ -1.19
PCF11-205ENST00000530906 PKDCCQ504Y2 493 aa7.6□□□□□ -1.19
PCF11-205ENST00000530906 ZNF326Q5BKZ1 582 aaKnown RBP7.6□□□□□ -1.19
PCF11-205ENST00000530906 COL17A1Q9UMD9 1497 aaPredicted RBP7.6□□□□□ -1.19
PCF11-205ENST00000530906 IQGAP1P46940 1657 aa7.6□□□□□ -1.19
PCF11-205ENST00000530906 KIF1BO60333 1816 aa7.59□□□□□ -1.19
PCF11-205ENST00000530906 DDX11L8A8MPP1 907 aa7.59□□□□□ -1.19
PCF11-205ENST00000530906 C11orf95C9JLR9 678 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms