RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 MON2Q7Z3U7 1717 aa15.15■□□□□ 0.02
CLP1-203ENST00000529430 KIF20BQ96Q89 1820 aa15.15■□□□□ 0.02
CLP1-203ENST00000529430 AKAP12Q02952 1782 aa15.14■□□□□ 0.01
CLP1-203ENST00000529430 TRIM35Q9UPQ4 493 aa15.14■□□□□ 0.01
CLP1-203ENST00000529430 RIPK4P57078 832 aa15.13■□□□□ 0.01
CLP1-203ENST00000529430 PSME1Q06323 249 aa15.13■□□□□ 0.01
CLP1-203ENST00000529430 USP35Q9P2H5 1018 aa15.13■□□□□ 0.01
CLP1-203ENST00000529430 ZNF335Q9H4Z2 1342 aaPredicted RBP15.13■□□□□ 0.01
CLP1-203ENST00000529430 CALD1Q05682 793 aaKnown RBP15.13■□□□□ 0.01
CLP1-203ENST00000529430 COG6Q9Y2V7 657 aa15.13■□□□□ 0.01
CLP1-203ENST00000529430 ZKSCAN2Q63HK3 967 aa15.12■□□□□ 0.01
CLP1-203ENST00000529430 PANK1Q8TE04 598 aa15.12■□□□□ 0.01
CLP1-203ENST00000529430 FAM161AQ3B820 660 aa15.11■□□□□ 0.01
CLP1-203ENST00000529430 DDRGK1Q96HY6 314 aa15.11■□□□□ 0.01
CLP1-203ENST00000529430 PPM1GO15355 546 aaPredicted RBP15.11■□□□□ 0.01
CLP1-203ENST00000529430 RSPH6AQ9H0K4 717 aa15.11■□□□□ 0.01
CLP1-203ENST00000529430 SSH2Q76I76 1423 aa15.1■□□□□ 0.01
CLP1-203ENST00000529430 C1orf167Q5SNV9 1468 aa15.09■□□□□ 0.01
CLP1-203ENST00000529430 CDK12Q9NYV4 1490 aaPredicted RBP15.09■□□□□ 0.01
CLP1-203ENST00000529430 STRCP1A6NGW2 1772 aa15.09■□□□□ 0.01
CLP1-203ENST00000529430 RGPD8O14715 1765 aaPredicted RBP15.09■□□□□ 0.01
CLP1-203ENST00000529430 EXOSC9Q06265 439 aaKnown RBP15.09■□□□□ 0.01
CLP1-203ENST00000529430 ZNF428Q96B54 188 aa15.09■□□□□ 0.01
CLP1-203ENST00000529430 ORAI2Q96SN7 254 aa15.09■□□□□ 0.01
CLP1-203ENST00000529430 LRRC7Q96NW7 1537 aa15.09■□□□□ 0.01
CLP1-203ENST00000529430 PRKAR2BP31323 418 aa15.08■□□□□ 0.01
CLP1-203ENST00000529430 IL13P35225 146 aa15.08■□□□□ 0.01
CLP1-203ENST00000529430 NFE2L2Q16236 605 aa15.08■□□□□ 0.01
CLP1-203ENST00000529430 NPM2Q86SE8 214 aaKnown RBP15.08■□□□□ 0.01
CLP1-203ENST00000529430 ABTB2Q8N961 1025 aa15.08■□□□□ 0.01
CLP1-203ENST00000529430 NRKQ7Z2Y5 1582 aa15.08■□□□□ 0.01
CLP1-203ENST00000529430 IGHDP01880 384 aa15.08■□□□□ 0
CLP1-203ENST00000529430 NLRP6P59044 892 aa15.08■□□□□ 0
CLP1-203ENST00000529430 DZIP1LQ8IYY4 767 aaKnown RBP15.08■□□□□ 0
CLP1-203ENST00000529430 SMC4Q9NTJ3 1288 aa15.08■□□□□ 0
CLP1-203ENST00000529430 IPO8O15397 1037 aaKnown RBP15.07■□□□□ 0
CLP1-203ENST00000529430 FOXO3O43524 673 aa15.07■□□□□ 0
CLP1-203ENST00000529430 LMOD3Q0VAK6 560 aa15.07■□□□□ 0
CLP1-203ENST00000529430 MVPQ14764 893 aaKnown RBP15.07■□□□□ 0
CLP1-203ENST00000529430 FTSJ3Q8IY81 847 aaKnown RBP15.07■□□□□ 0
CLP1-203ENST00000529430 TSR2Q969E8 191 aaKnown RBP15.07■□□□□ 0
CLP1-203ENST00000529430 RWDD1Q9H446 243 aaPredicted RBP15.07■□□□□ 0
CLP1-203ENST00000529430 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
CLP1-203ENST00000529430 MST1RQ04912 1400 aa15.06■□□□□ 0
CLP1-203ENST00000529430 ALDH1L2Q3SY69 923 aa15.06■□□□□ 0
CLP1-203ENST00000529430 BCL2L13Q9BXK5 485 aa15.06■□□□□ 0
CLP1-203ENST00000529430 EMILIN1Q9Y6C2 1016 aa15.06■□□□□ 0
CLP1-203ENST00000529430 USP31Q70CQ4 1352 aa15.06■□□□□ 0
CLP1-203ENST00000529430 OVOS2A0A0J9YW53 1432 aa15.06■□□□□ 0
CLP1-203ENST00000529430 OVOS2Q6IE36 1432 aa15.06■□□□□ 0
CLP1-203ENST00000529430 KIF16BQ96L93 1317 aa15.05■□□□□ 0
CLP1-203ENST00000529430 KIF1AQ12756 1690 aa15.05■□□□□ -0
CLP1-203ENST00000529430 RLBP1P12271 317 aa15.04■□□□□ -0
CLP1-203ENST00000529430 RGS3P49796 1198 aa15.04■□□□□ -0
CLP1-203ENST00000529430 SKAP1Q86WV1 359 aa15.04■□□□□ -0
CLP1-203ENST00000529430 NPHP3Q7Z494 1330 aa15.04■□□□□ -0
CLP1-203ENST00000529430 ATF7IPQ6VMQ6 1270 aa15.03■□□□□ -0
CLP1-203ENST00000529430 AEBP2Q6ZN18 517 aaPredicted RBP15.03■□□□□ -0
CLP1-203ENST00000529430 KRT28Q7Z3Y7 464 aa15.03■□□□□ -0
CLP1-203ENST00000529430 SSH1Q8WYL5 1049 aa15.03■□□□□ -0
CLP1-203ENST00000529430 DDX19BQ9UMR2 479 aa15.03■□□□□ -0
CLP1-203ENST00000529430 BRPF1P55201 1214 aaPredicted RBP15.03■□□□□ -0
CLP1-203ENST00000529430 GNAI1P63096 354 aa15.03■□□□□ -0
CLP1-203ENST00000529430 RRS1Q15050 365 aaKnown RBP15.03■□□□□ -0
CLP1-203ENST00000529430 C8orf34Q49A92 452 aa15.03■□□□□ -0
CLP1-203ENST00000529430 IFT57Q9NWB7 429 aa15.03■□□□□ -0
CLP1-203ENST00000529430 SOX12O15370 315 aa15.02□□□□□ -0.01
CLP1-203ENST00000529430 FBLN1P23142 703 aa15.02□□□□□ -0.01
CLP1-203ENST00000529430 LMOD2Q6P5Q4 547 aa15.02□□□□□ -0.01
CLP1-203ENST00000529430 SLAIN2Q9P270 581 aa15.02□□□□□ -0.01
CLP1-203ENST00000529430 HMOX1P09601 288 aa15.01□□□□□ -0.01
CLP1-203ENST00000529430 NUTM2GQ5VZR2 741 aa15.01□□□□□ -0.01
CLP1-203ENST00000529430 KCNH5Q8NCM2 988 aa15.01□□□□□ -0.01
CLP1-203ENST00000529430 CHMP4BQ9H444 224 aaKnown RBP15.01□□□□□ -0.01
CLP1-203ENST00000529430 PCDHB15Q9Y5E8 787 aa15.01□□□□□ -0.01
CLP1-203ENST00000529430 XPCQ01831 940 aaPredicted RBP15.01□□□□□ -0.01
CLP1-203ENST00000529430 TRIM27P14373 513 aa15□□□□□ -0.01
CLP1-203ENST00000529430 PHACTR3Q96KR7 559 aa15□□□□□ -0.01
CLP1-203ENST00000529430 NOB1Q9ULX3 412 aaKnown RBP15□□□□□ -0.01
CLP1-203ENST00000529430 TNNQ9UQP3 1299 aa15□□□□□ -0.01
CLP1-203ENST00000529430 AMPHP49418 695 aa14.99□□□□□ -0.01
CLP1-203ENST00000529430 PIK3C2AO00443 1686 aa14.99□□□□□ -0.01
CLP1-203ENST00000529430 ZNF853P0CG23 659 aa14.98□□□□□ -0.01
CLP1-203ENST00000529430 HDAC1Q13547 482 aaPredicted RBP14.98□□□□□ -0.01
CLP1-203ENST00000529430 ARHGAP45Q92619 1136 aa14.98□□□□□ -0.01
CLP1-203ENST00000529430 KIF24Q5T7B8 1368 aa14.97□□□□□ -0.01
CLP1-203ENST00000529430 BRINP3Q76B58 766 aa14.97□□□□□ -0.01
CLP1-203ENST00000529430 ITPRIPQ8IWB1 547 aa14.97□□□□□ -0.01
CLP1-203ENST00000529430 LAS1LQ9Y4W2 734 aaKnown RBP14.97□□□□□ -0.01
CLP1-203ENST00000529430 SBNO1A3KN83 1393 aa14.97□□□□□ -0.01
CLP1-203ENST00000529430 FLT4P35916 1363 aa14.97□□□□□ -0.01
CLP1-203ENST00000529430 MAP2P11137 1827 aaKnown RBP14.96□□□□□ -0.01
CLP1-203ENST00000529430 XIRP1Q702N8 1843 aaKnown RBP14.96□□□□□ -0.01
CLP1-203ENST00000529430 HAP1P54257 671 aaPredicted RBP14.96□□□□□ -0.01
CLP1-203ENST00000529430 CFAP44Q96MT7 982 aa14.96□□□□□ -0.01
CLP1-203ENST00000529430 MAP3K19Q56UN5 1328 aa14.96□□□□□ -0.01
CLP1-203ENST00000529430 VAMP4O75379 141 aa14.96□□□□□ -0.02
CLP1-203ENST00000529430 EIF4A2Q14240 407 aaKnown RBP14.96□□□□□ -0.02
CLP1-203ENST00000529430 DAXXQ9UER7 740 aaPredicted RBP14.96□□□□□ -0.02
CLP1-203ENST00000529430 PDZRN3Q9UPQ7 1066 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms