RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 CDK12Q9NYV4 1490 aaPredicted RBP16.62■□□□□ 0.25
ATG13-211ENST00000528494 ZBTB7CA1YPR0 619 aa16.62■□□□□ 0.25
ATG13-211ENST00000528494 EIF5BO60841 1220 aaKnown RBP16.62■□□□□ 0.25
ATG13-211ENST00000528494 KRT28Q7Z3Y7 464 aa16.62■□□□□ 0.25
ATG13-211ENST00000528494 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
ATG13-211ENST00000528494 PIK3C2AO00443 1686 aa16.62■□□□□ 0.25
ATG13-211ENST00000528494 TMPOP42166 694 aaKnown RBP16.62■□□□□ 0.25
ATG13-211ENST00000528494 CADPS2Q86UW7 1296 aa16.62■□□□□ 0.25
ATG13-211ENST00000528494 PHACTR3Q96KR7 559 aa16.62■□□□□ 0.25
ATG13-211ENST00000528494 PKNOX2Q96KN3 472 aa16.61■□□□□ 0.25
ATG13-211ENST00000528494 IPO9Q96P70 1041 aaKnown RBP16.61■□□□□ 0.25
ATG13-211ENST00000528494 RIPK4P57078 832 aa16.6■□□□□ 0.25
ATG13-211ENST00000528494 NGEFQ8N5V2 710 aa16.6■□□□□ 0.25
ATG13-211ENST00000528494 MSH6P52701 1360 aa16.6■□□□□ 0.25
ATG13-211ENST00000528494 AEBP1Q8IUX7 1158 aa16.6■□□□□ 0.25
ATG13-211ENST00000528494 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
ATG13-211ENST00000528494 IQSEC2Q5JU85 1478 aa16.6■□□□□ 0.25
ATG13-211ENST00000528494 E9PSI1 815 aa16.59■□□□□ 0.25
ATG13-211ENST00000528494 NEFMP07197 916 aa16.59■□□□□ 0.25
ATG13-211ENST00000528494 ZBTB47Q9UFB7 747 aaPredicted RBP16.59■□□□□ 0.25
ATG13-211ENST00000528494 ANP32AP39687 249 aaKnown RBP16.59■□□□□ 0.25
ATG13-211ENST00000528494 SULT6B1Q6IMI4 303 aa16.59■□□□□ 0.25
ATG13-211ENST00000528494 MST1RQ04912 1400 aa16.59■□□□□ 0.25
ATG13-211ENST00000528494 LTV1Q96GA3 475 aaPredicted RBP16.58■□□□□ 0.25
ATG13-211ENST00000528494 PLIN1O60240 522 aa16.57■□□□□ 0.24
ATG13-211ENST00000528494 TRMT2AQ8IZ69 625 aaKnown RBP16.57■□□□□ 0.24
ATG13-211ENST00000528494 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
ATG13-211ENST00000528494 TRIM35Q9UPQ4 493 aa16.57■□□□□ 0.24
ATG13-211ENST00000528494 SBNO1A3KN83 1393 aa16.56■□□□□ 0.24
ATG13-211ENST00000528494 FLT4P35916 1363 aa16.56■□□□□ 0.24
ATG13-211ENST00000528494 CCDC27Q2M243 656 aa16.56■□□□□ 0.24
ATG13-211ENST00000528494 NCOA3Q9Y6Q9 1424 aa16.56■□□□□ 0.24
ATG13-211ENST00000528494 RNF123Q5XPI4 1314 aa16.56■□□□□ 0.24
ATG13-211ENST00000528494 HOXC9P31274 260 aa16.56■□□□□ 0.24
ATG13-211ENST00000528494 PEAK1Q9H792 1746 aa16.55■□□□□ 0.24
ATG13-211ENST00000528494 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
ATG13-211ENST00000528494 RRP1P56182 461 aaKnown RBP16.55■□□□□ 0.24
ATG13-211ENST00000528494 WDR63Q8IWG1 891 aa16.55■□□□□ 0.24
ATG13-211ENST00000528494 B4GALNT3Q6L9W6 998 aa16.54■□□□□ 0.24
ATG13-211ENST00000528494 GCP02774 474 aa16.53■□□□□ 0.24
ATG13-211ENST00000528494 DCCP43146 1447 aa16.53■□□□□ 0.24
ATG13-211ENST00000528494 TSR2Q969E8 191 aaKnown RBP16.53■□□□□ 0.24
ATG13-211ENST00000528494 THUMPD2Q9BTF0 503 aaKnown RBP16.53■□□□□ 0.24
ATG13-211ENST00000528494 SLAIN2Q9P270 581 aa16.53■□□□□ 0.24
ATG13-211ENST00000528494 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
ATG13-211ENST00000528494 EYA1Q99502 592 aa16.52■□□□□ 0.24
ATG13-211ENST00000528494 BRINP3Q76B58 766 aa16.52■□□□□ 0.23
ATG13-211ENST00000528494 KCNH5Q8NCM2 988 aa16.52■□□□□ 0.23
ATG13-211ENST00000528494 CABLES1Q8TDN4 633 aa16.51■□□□□ 0.23
ATG13-211ENST00000528494 USP35Q9P2H5 1018 aa16.51■□□□□ 0.23
ATG13-211ENST00000528494 LAS1LQ9Y4W2 734 aaKnown RBP16.51■□□□□ 0.23
ATG13-211ENST00000528494 NPHP3Q7Z494 1330 aa16.5■□□□□ 0.23
ATG13-211ENST00000528494 FAM83GA6ND36 823 aa16.5■□□□□ 0.23
ATG13-211ENST00000528494 ZC3H6P61129 1189 aaKnown RBP16.5■□□□□ 0.23
ATG13-211ENST00000528494 MARF1Q9Y4F3 1742 aaKnown RBP16.49■□□□□ 0.23
ATG13-211ENST00000528494 BCAR3O75815 825 aa16.49■□□□□ 0.23
ATG13-211ENST00000528494 DCTN1Q14203 1278 aa16.49■□□□□ 0.23
ATG13-211ENST00000528494 USHBP1Q8N6Y0 703 aa16.49■□□□□ 0.23
ATG13-211ENST00000528494 MYH16Q9H6N6 1097 aa16.49■□□□□ 0.23
ATG13-211ENST00000528494 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
ATG13-211ENST00000528494 IP6K1Q92551 441 aa16.49■□□□□ 0.23
ATG13-211ENST00000528494 XIRP1Q702N8 1843 aaKnown RBP16.48■□□□□ 0.23
ATG13-211ENST00000528494 C20orf194Q5TEA3 1177 aa16.46■□□□□ 0.23
ATG13-211ENST00000528494 ARHGEF25Q86VW2 580 aa16.46■□□□□ 0.23
ATG13-211ENST00000528494 KIF1AQ12756 1690 aa16.46■□□□□ 0.23
ATG13-211ENST00000528494 EXOC6Q8TAG9 804 aa16.45■□□□□ 0.22
ATG13-211ENST00000528494 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
ATG13-211ENST00000528494 NFAT5O94916 1531 aa16.45■□□□□ 0.22
ATG13-211ENST00000528494 LRRC59Q96AG4 307 aaKnown RBP16.45■□□□□ 0.22
ATG13-211ENST00000528494 BCL2L13Q9BXK5 485 aa16.45■□□□□ 0.22
ATG13-211ENST00000528494 AXIN2Q9Y2T1 843 aa16.45■□□□□ 0.22
ATG13-211ENST00000528494 ARHGEF10O15013 1369 aa16.45■□□□□ 0.22
ATG13-211ENST00000528494 EXOSC9Q06265 439 aaKnown RBP16.44■□□□□ 0.22
ATG13-211ENST00000528494 NBPF6Q5VWK0 638 aa16.44■□□□□ 0.22
ATG13-211ENST00000528494 NBPF4Q96M43 638 aa16.44■□□□□ 0.22
ATG13-211ENST00000528494 USP19O94966 1318 aa16.44■□□□□ 0.22
ATG13-211ENST00000528494 KIF24Q5T7B8 1368 aa16.44■□□□□ 0.22
ATG13-211ENST00000528494 MTHFSDQ2M296 383 aaKnown RBP16.44■□□□□ 0.22
ATG13-211ENST00000528494 MCM10Q7L590 875 aa16.44■□□□□ 0.22
ATG13-211ENST00000528494 TRPM3Q9HCF6 1732 aaPredicted RBP16.44■□□□□ 0.22
ATG13-211ENST00000528494 SPATA31A3Q5VYP0 1347 aa16.43■□□□□ 0.22
ATG13-211ENST00000528494 RTL1A6NKG5 1358 aa16.42■□□□□ 0.22
ATG13-211ENST00000528494 USP54Q70EL1 1684 aa16.42■□□□□ 0.22
ATG13-211ENST00000528494 FRAT1Q92837 279 aaPredicted RBP16.42■□□□□ 0.22
ATG13-211ENST00000528494 IL16Q14005 1332 aa16.41■□□□□ 0.22
ATG13-211ENST00000528494 RARSP54136 660 aaKnown RBP16.41■□□□□ 0.22
ATG13-211ENST00000528494 LMOD3Q0VAK6 560 aa16.41■□□□□ 0.22
ATG13-211ENST00000528494 CHRNA2Q15822 529 aa16.41■□□□□ 0.22
ATG13-211ENST00000528494 LTN1O94822 1766 aa16.41■□□□□ 0.22
ATG13-211ENST00000528494 KDRP35968 1356 aa16.41■□□□□ 0.22
ATG13-211ENST00000528494 ANKRD24Q8TF21 1146 aa16.41■□□□□ 0.22
ATG13-211ENST00000528494 CRBNQ96SW2 442 aa16.41■□□□□ 0.22
ATG13-211ENST00000528494 PXDNQ92626 1479 aa16.4■□□□□ 0.22
ATG13-211ENST00000528494 TNS3Q68CZ2 1445 aa16.4■□□□□ 0.22
ATG13-211ENST00000528494 BRPF3Q9ULD4 1205 aa16.4■□□□□ 0.22
ATG13-211ENST00000528494 RGPD1P0DJD0 1748 aa16.4■□□□□ 0.22
ATG13-211ENST00000528494 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
ATG13-211ENST00000528494 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.4■□□□□ 0.22
ATG13-211ENST00000528494 SLIT3O75094 1523 aa16.39■□□□□ 0.21
ATG13-211ENST00000528494 ELL2O00472 640 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms