RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 DEFB132Q7Z7B7 95 aa12.9□□□□□ -0.34
SPARC-202ENST00000520687 PIK3R4Q99570 1358 aa12.9□□□□□ -0.34
SPARC-202ENST00000520687 BCL9LQ86UU0 1499 aa12.9□□□□□ -0.34
SPARC-202ENST00000520687 KIF20BQ96Q89 1820 aa12.9□□□□□ -0.34
SPARC-202ENST00000520687 PLEKHF1Q96S99 279 aa12.9□□□□□ -0.35
SPARC-202ENST00000520687 CRBNQ96SW2 442 aa12.9□□□□□ -0.35
SPARC-202ENST00000520687 CHD2O14647 1828 aaKnown RBP12.89□□□□□ -0.35
SPARC-202ENST00000520687 PTCH1Q13635 1447 aa12.89□□□□□ -0.35
SPARC-202ENST00000520687 ROBO2Q9HCK4 1378 aa12.89□□□□□ -0.35
SPARC-202ENST00000520687 PSDA5PKW4 1024 aaPredicted RBP12.89□□□□□ -0.35
SPARC-202ENST00000520687 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
SPARC-202ENST00000520687 ADAMTS2O95450 1211 aa12.89□□□□□ -0.35
SPARC-202ENST00000520687 CALD1Q05682 793 aaKnown RBP12.88□□□□□ -0.35
SPARC-202ENST00000520687 COG3Q96JB2 828 aa12.88□□□□□ -0.35
SPARC-202ENST00000520687 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
SPARC-202ENST00000520687 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
SPARC-202ENST00000520687 U2SURPO15042 1029 aaKnown RBP12.87□□□□□ -0.35
SPARC-202ENST00000520687 PLIN1O60240 522 aa12.87□□□□□ -0.35
SPARC-202ENST00000520687 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
SPARC-202ENST00000520687 CENPQQ7L2Z9 268 aaPredicted RBP12.87□□□□□ -0.35
SPARC-202ENST00000520687 FNBP4Q8N3X1 1017 aaPredicted RBP12.87□□□□□ -0.35
SPARC-202ENST00000520687 POLKQ9UBT6 870 aa12.87□□□□□ -0.35
SPARC-202ENST00000520687 AKAP12Q02952 1782 aa12.87□□□□□ -0.35
SPARC-202ENST00000520687 TOPAZ1Q8N9V7 1692 aa12.87□□□□□ -0.35
SPARC-202ENST00000520687 MON2Q7Z3U7 1717 aa12.86□□□□□ -0.35
SPARC-202ENST00000520687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.86□□□□□ -0.35
SPARC-202ENST00000520687 DCCP43146 1447 aa12.85□□□□□ -0.35
SPARC-202ENST00000520687 ZNF428Q96B54 188 aa12.85□□□□□ -0.35
SPARC-202ENST00000520687 AMOTL2Q9Y2J4 779 aa12.85□□□□□ -0.35
SPARC-202ENST00000520687 RARSP54136 660 aaKnown RBP12.84□□□□□ -0.35
SPARC-202ENST00000520687 NEUROD2Q15784 382 aa12.84□□□□□ -0.35
SPARC-202ENST00000520687 TTC21AQ8NDW8 1320 aa12.84□□□□□ -0.35
SPARC-202ENST00000520687 LMOD3Q0VAK6 560 aa12.83□□□□□ -0.36
SPARC-202ENST00000520687 RRP7AQ9Y3A4 280 aaKnown RBP12.83□□□□□ -0.36
SPARC-202ENST00000520687 CANXP27824 592 aaKnown RBP12.82□□□□□ -0.36
SPARC-202ENST00000520687 TTC21BQ7Z4L5 1316 aa12.82□□□□□ -0.36
SPARC-202ENST00000520687 PRR36Q9H6K5 1346 aa12.82□□□□□ -0.36
SPARC-202ENST00000520687 ANKARQ7Z5J8 1434 aa12.82□□□□□ -0.36
SPARC-202ENST00000520687 PTPRUQ92729 1446 aa12.82□□□□□ -0.36
SPARC-202ENST00000520687 BAG6P46379 1132 aa12.81□□□□□ -0.36
SPARC-202ENST00000520687 RIPK4P57078 832 aa12.81□□□□□ -0.36
SPARC-202ENST00000520687 C20orf194Q5TEA3 1177 aa12.81□□□□□ -0.36
SPARC-202ENST00000520687 NME9Q86XW9 330 aa12.81□□□□□ -0.36
SPARC-202ENST00000520687 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
SPARC-202ENST00000520687 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
SPARC-202ENST00000520687 KDM2BQ8NHM5 1336 aa12.81□□□□□ -0.36
SPARC-202ENST00000520687 BCAR3O75815 825 aa12.81□□□□□ -0.36
SPARC-202ENST00000520687 IL13P35225 146 aa12.81□□□□□ -0.36
SPARC-202ENST00000520687 C1QTNF8P60827 252 aa12.81□□□□□ -0.36
SPARC-202ENST00000520687 GJD4Q96KN9 370 aaPredicted RBP12.81□□□□□ -0.36
SPARC-202ENST00000520687 ACEP12821 1306 aa12.81□□□□□ -0.36
SPARC-202ENST00000520687 USP6P35125 1406 aa12.8□□□□□ -0.36
SPARC-202ENST00000520687 NFE2L2Q16236 605 aa12.8□□□□□ -0.36
SPARC-202ENST00000520687 NRKQ7Z2Y5 1582 aa12.79□□□□□ -0.36
SPARC-202ENST00000520687 USP31Q70CQ4 1352 aa12.79□□□□□ -0.36
SPARC-202ENST00000520687 SSH2Q76I76 1423 aa12.78□□□□□ -0.36
SPARC-202ENST00000520687 ZNF784Q8NCA9 323 aaPredicted RBP12.78□□□□□ -0.36
SPARC-202ENST00000520687 FMN2Q9NZ56 1722 aa12.77□□□□□ -0.36
SPARC-202ENST00000520687 PPM1GO15355 546 aaPredicted RBP12.77□□□□□ -0.36
SPARC-202ENST00000520687 IPO8O15397 1037 aaKnown RBP12.77□□□□□ -0.36
SPARC-202ENST00000520687 PRKAR2BP31323 418 aa12.77□□□□□ -0.36
SPARC-202ENST00000520687 ALDH1L2Q3SY69 923 aa12.77□□□□□ -0.36
SPARC-202ENST00000520687 OVOS2A0A0J9YW53 1432 aa12.77□□□□□ -0.37
SPARC-202ENST00000520687 MST1RQ04912 1400 aa12.77□□□□□ -0.37
SPARC-202ENST00000520687 OVOS2Q6IE36 1432 aa12.77□□□□□ -0.37
SPARC-202ENST00000520687 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.37
SPARC-202ENST00000520687 ZKSCAN2Q63HK3 967 aa12.77□□□□□ -0.37
SPARC-202ENST00000520687 PMFBP1Q8TBY8 1022 aa12.77□□□□□ -0.37
SPARC-202ENST00000520687 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
SPARC-202ENST00000520687 KIF24Q5T7B8 1368 aa12.76□□□□□ -0.37
SPARC-202ENST00000520687 ANP32AP39687 249 aaKnown RBP12.76□□□□□ -0.37
SPARC-202ENST00000520687 HAP1P54257 671 aaPredicted RBP12.76□□□□□ -0.37
SPARC-202ENST00000520687 GNAI1P63096 354 aa12.76□□□□□ -0.37
SPARC-202ENST00000520687 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
SPARC-202ENST00000520687 CHMP4BQ9H444 224 aaKnown RBP12.76□□□□□ -0.37
SPARC-202ENST00000520687 EMILIN1Q9Y6C2 1016 aa12.76□□□□□ -0.37
SPARC-202ENST00000520687 NALCNQ8IZF0 1738 aa12.75□□□□□ -0.37
SPARC-202ENST00000520687 IFT57Q9NWB7 429 aa12.75□□□□□ -0.37
SPARC-202ENST00000520687 KIF16BQ96L93 1317 aa12.74□□□□□ -0.37
SPARC-202ENST00000520687 NGDNQ8NEJ9 315 aaKnown RBP12.74□□□□□ -0.37
SPARC-202ENST00000520687 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.74□□□□□ -0.37
SPARC-202ENST00000520687 RGPD8O14715 1765 aaPredicted RBP12.73□□□□□ -0.37
SPARC-202ENST00000520687 PDE4AP27815 886 aa12.73□□□□□ -0.37
SPARC-202ENST00000520687 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
SPARC-202ENST00000520687 FRAT1Q92837 279 aaPredicted RBP12.73□□□□□ -0.37
SPARC-202ENST00000520687 BACH2Q9BYV9 841 aa12.73□□□□□ -0.37
SPARC-202ENST00000520687 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
SPARC-202ENST00000520687 MAP2P11137 1827 aaKnown RBP12.72□□□□□ -0.37
SPARC-202ENST00000520687 BRWD3Q6RI45 1802 aa12.72□□□□□ -0.37
SPARC-202ENST00000520687 ARHGAP45Q92619 1136 aa12.72□□□□□ -0.37
SPARC-202ENST00000520687 DDX17Q92841 729 aaKnown RBP12.72□□□□□ -0.37
SPARC-202ENST00000520687 RWDD1Q9H446 243 aaPredicted RBP12.72□□□□□ -0.37
SPARC-202ENST00000520687 SMC4Q9NTJ3 1288 aa12.72□□□□□ -0.37
SPARC-202ENST00000520687 COL22A1Q8NFW1 1626 aaPredicted RBP12.72□□□□□ -0.37
SPARC-202ENST00000520687 ZNF853P0CG23 659 aa12.71□□□□□ -0.37
SPARC-202ENST00000520687 MVPQ14764 893 aaKnown RBP12.71□□□□□ -0.37
SPARC-202ENST00000520687 FTSJ3Q8IY81 847 aaKnown RBP12.71□□□□□ -0.37
SPARC-202ENST00000520687 PANK1Q8TE04 598 aa12.71□□□□□ -0.37
SPARC-202ENST00000520687 COG6Q9Y2V7 657 aa12.71□□□□□ -0.37
SPARC-202ENST00000520687 SBNO1A3KN83 1393 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms