RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CDK12Q9NYV4 1490 aaPredicted RBP23.58■■□□□ 1.37
SDC2-202ENST00000518385 FBLN1P23142 703 aa23.58■■□□□ 1.37
SDC2-202ENST00000518385 PIK3C2AO00443 1686 aa23.58■■□□□ 1.36
SDC2-202ENST00000518385 FCHSD2O94868 740 aa23.57■■□□□ 1.36
SDC2-202ENST00000518385 ABTB2Q8N961 1025 aa23.57■■□□□ 1.36
SDC2-202ENST00000518385 PLEKHF1Q96S99 279 aa23.57■■□□□ 1.36
SDC2-202ENST00000518385 MAP2P11137 1827 aaKnown RBP23.57■■□□□ 1.36
SDC2-202ENST00000518385 U2SURPO15042 1029 aaKnown RBP23.57■■□□□ 1.36
SDC2-202ENST00000518385 NLRP6P59044 892 aa23.57■■□□□ 1.36
SDC2-202ENST00000518385 KRT28Q7Z3Y7 464 aa23.57■■□□□ 1.36
SDC2-202ENST00000518385 SLAIN2Q9P270 581 aa23.57■■□□□ 1.36
SDC2-202ENST00000518385 KDM2BQ8NHM5 1336 aa23.56■■□□□ 1.36
SDC2-202ENST00000518385 MAPK8IP3Q9UPT6 1336 aa23.55■■□□□ 1.36
SDC2-202ENST00000518385 LTBP4Q8N2S1 1624 aa23.55■■□□□ 1.36
SDC2-202ENST00000518385 AEBP2Q6ZN18 517 aaPredicted RBP23.54■■□□□ 1.36
SDC2-202ENST00000518385 USP54Q70EL1 1684 aa23.54■■□□□ 1.36
SDC2-202ENST00000518385 NEFMP07197 916 aa23.52■■□□□ 1.36
SDC2-202ENST00000518385 CRBNQ96SW2 442 aa23.52■■□□□ 1.36
SDC2-202ENST00000518385 SPINK5Q9NQ38 1064 aaPredicted RBP23.52■■□□□ 1.36
SDC2-202ENST00000518385 EMILIN1Q9Y6C2 1016 aa23.52■■□□□ 1.36
SDC2-202ENST00000518385 XPCQ01831 940 aaPredicted RBP23.52■■□□□ 1.36
SDC2-202ENST00000518385 BRINP3Q76B58 766 aa23.52■■□□□ 1.36
SDC2-202ENST00000518385 MYH16Q9H6N6 1097 aa23.52■■□□□ 1.36
SDC2-202ENST00000518385 IL16Q14005 1332 aa23.51■■□□□ 1.35
SDC2-202ENST00000518385 RRS1Q15050 365 aaKnown RBP23.51■■□□□ 1.35
SDC2-202ENST00000518385 NUTM2GQ5VZR2 741 aa23.51■■□□□ 1.35
SDC2-202ENST00000518385 TRPM3Q9HCF6 1732 aaPredicted RBP23.5■■□□□ 1.35
SDC2-202ENST00000518385 NPHP3Q7Z494 1330 aa23.5■■□□□ 1.35
SDC2-202ENST00000518385 TMPOP42166 694 aaKnown RBP23.5■■□□□ 1.35
SDC2-202ENST00000518385 NPM2Q86SE8 214 aaKnown RBP23.5■■□□□ 1.35
SDC2-202ENST00000518385 MARF1Q9Y4F3 1742 aaKnown RBP23.5■■□□□ 1.35
SDC2-202ENST00000518385 NEUROD2Q15784 382 aa23.48■■□□□ 1.35
SDC2-202ENST00000518385 RRP7AQ9Y3A4 280 aaKnown RBP23.48■■□□□ 1.35
SDC2-202ENST00000518385 CT47B1P0C2W7 299 aaPredicted RBP23.48■■□□□ 1.35
SDC2-202ENST00000518385 FAM161AQ3B820 660 aa23.48■■□□□ 1.35
SDC2-202ENST00000518385 SBNO1A3KN83 1393 aa23.47■■□□□ 1.35
SDC2-202ENST00000518385 IL13P35225 146 aa23.47■■□□□ 1.35
SDC2-202ENST00000518385 DDX17Q92841 729 aaKnown RBP23.47■■□□□ 1.35
SDC2-202ENST00000518385 DAXXQ9UER7 740 aaPredicted RBP23.46■■□□□ 1.35
SDC2-202ENST00000518385 RSPH6AQ9H0K4 717 aa23.45■■□□□ 1.34
SDC2-202ENST00000518385 SOX12O15370 315 aa23.44■■□□□ 1.34
SDC2-202ENST00000518385 AAMPQ13685 434 aa23.44■■□□□ 1.34
SDC2-202ENST00000518385 MAP3K19Q56UN5 1328 aa23.44■■□□□ 1.34
SDC2-202ENST00000518385 PXDNQ92626 1479 aa23.43■■□□□ 1.34
SDC2-202ENST00000518385 PLIN1O60240 522 aa23.43■■□□□ 1.34
SDC2-202ENST00000518385 KCNH5Q8NCM2 988 aa23.43■■□□□ 1.34
SDC2-202ENST00000518385 ALS2Q96Q42 1657 aa23.42■■□□□ 1.34
SDC2-202ENST00000518385 VIRMAQ69YN4 1812 aaKnown RBP23.42■■□□□ 1.34
SDC2-202ENST00000518385 LMOD2Q6P5Q4 547 aa23.41■■□□□ 1.34
SDC2-202ENST00000518385 TRIM35Q9UPQ4 493 aa23.41■■□□□ 1.34
SDC2-202ENST00000518385 USP19O94966 1318 aa23.41■■□□□ 1.34
SDC2-202ENST00000518385 RIPK4P57078 832 aa23.4■■□□□ 1.34
SDC2-202ENST00000518385 PDE3AQ14432 1141 aa23.4■■□□□ 1.34
SDC2-202ENST00000518385 KIF24Q5T7B8 1368 aa23.4■■□□□ 1.34
SDC2-202ENST00000518385 CALD1Q05682 793 aaKnown RBP23.4■■□□□ 1.34
SDC2-202ENST00000518385 PEAK1Q9H792 1746 aa23.4■■□□□ 1.34
SDC2-202ENST00000518385 SOS2Q07890 1332 aaPredicted RBP23.39■■□□□ 1.34
SDC2-202ENST00000518385 SPATA31A3Q5VYP0 1347 aa23.39■■□□□ 1.34
SDC2-202ENST00000518385 PRKAR2BP31323 418 aa23.39■■□□□ 1.33
SDC2-202ENST00000518385 SLIT3O75094 1523 aa23.38■■□□□ 1.33
SDC2-202ENST00000518385 GCP02774 474 aa23.38■■□□□ 1.33
SDC2-202ENST00000518385 AMPHP49418 695 aa23.38■■□□□ 1.33
SDC2-202ENST00000518385 NFE2L2Q16236 605 aa23.38■■□□□ 1.33
SDC2-202ENST00000518385 NFAT5O94916 1531 aa23.38■■□□□ 1.33
SDC2-202ENST00000518385 FLT4P35916 1363 aa23.38■■□□□ 1.33
SDC2-202ENST00000518385 TNS3Q68CZ2 1445 aa23.37■■□□□ 1.33
SDC2-202ENST00000518385 HSP90AB2PQ58FF8 381 aa23.37■■□□□ 1.33
SDC2-202ENST00000518385 LMOD3Q0VAK6 560 aa23.36■■□□□ 1.33
SDC2-202ENST00000518385 RARSP54136 660 aaKnown RBP23.35■■□□□ 1.33
SDC2-202ENST00000518385 EIF4A2Q14240 407 aaKnown RBP23.35■■□□□ 1.33
SDC2-202ENST00000518385 GSE1Q14687 1217 aa23.35■■□□□ 1.33
SDC2-202ENST00000518385 LAS1LQ9Y4W2 734 aaKnown RBP23.35■■□□□ 1.33
SDC2-202ENST00000518385 ARHGEF10O15013 1369 aa23.35■■□□□ 1.33
SDC2-202ENST00000518385 HOXC9P31274 260 aa23.34■■□□□ 1.33
SDC2-202ENST00000518385 BCAR3O75815 825 aa23.33■■□□□ 1.33
SDC2-202ENST00000518385 RTL1A6NKG5 1358 aa23.33■■□□□ 1.33
SDC2-202ENST00000518385 NHSL1Q5SYE7 1610 aa23.32■■□□□ 1.32
SDC2-202ENST00000518385 C20orf194Q5TEA3 1177 aa23.32■■□□□ 1.32
SDC2-202ENST00000518385 ARHGEF25Q86VW2 580 aa23.32■■□□□ 1.32
SDC2-202ENST00000518385 IP6K1Q92551 441 aa23.32■■□□□ 1.32
SDC2-202ENST00000518385 MED1Q15648 1581 aaPredicted RBP23.32■■□□□ 1.32
SDC2-202ENST00000518385 C8orf34Q49A92 452 aa23.31■■□□□ 1.32
SDC2-202ENST00000518385 LTN1O94822 1766 aa23.3■■□□□ 1.32
SDC2-202ENST00000518385 HMOX1P09601 288 aa23.3■■□□□ 1.32
SDC2-202ENST00000518385 NFKBIBQ15653 356 aa23.3■■□□□ 1.32
SDC2-202ENST00000518385 ZNF428Q96B54 188 aa23.3■■□□□ 1.32
SDC2-202ENST00000518385 PHRF1Q9P1Y6 1649 aaKnown RBP23.29■■□□□ 1.32
SDC2-202ENST00000518385 PHACTR3Q96KR7 559 aa23.28■■□□□ 1.32
SDC2-202ENST00000518385 RGPD1P0DJD0 1748 aa23.28■■□□□ 1.32
SDC2-202ENST00000518385 ROBO1Q9Y6N7 1651 aa23.27■■□□□ 1.32
SDC2-202ENST00000518385 TOM1O60784 492 aa23.27■■□□□ 1.32
SDC2-202ENST00000518385 PLEKHG5O94827 1062 aa23.27■■□□□ 1.32
SDC2-202ENST00000518385 CANXP27824 592 aaKnown RBP23.27■■□□□ 1.32
SDC2-202ENST00000518385 GNAI1P63096 354 aa23.25■■□□□ 1.31
SDC2-202ENST00000518385 CABLES1Q8TDN4 633 aa23.25■■□□□ 1.31
SDC2-202ENST00000518385 IFT57Q9NWB7 429 aa23.25■■□□□ 1.31
SDC2-202ENST00000518385 AHDC1Q5TGY3 1603 aaPredicted RBP23.23■■□□□ 1.31
SDC2-202ENST00000518385 CRYBG1Q9Y4K1 1723 aa23.23■■□□□ 1.31
SDC2-202ENST00000518385 ZC3H6P61129 1189 aaKnown RBP23.23■■□□□ 1.31
SDC2-202ENST00000518385 EXOSC9Q06265 439 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 201.6 ms