RNA–Protein interactions for RNA: ENST00000518080.2

HMBOX1-205, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-205ENST00000518080 MAPK8IP3Q9UPT6 1336 aa13.27□□□□□ -0.29
HMBOX1-205ENST00000518080 PHRF1Q9P1Y6 1649 aaKnown RBP13.27□□□□□ -0.29
HMBOX1-205ENST00000518080 SBNO1A3KN83 1393 aa13.26□□□□□ -0.29
HMBOX1-205ENST00000518080 FLT4P35916 1363 aa13.26□□□□□ -0.29
HMBOX1-205ENST00000518080 IQSEC2Q5JU85 1478 aa13.26□□□□□ -0.29
HMBOX1-205ENST00000518080 PNNQ9H307 717 aaKnown RBP13.26□□□□□ -0.29
HMBOX1-205ENST00000518080 NHSL1Q5SYE7 1610 aa13.25□□□□□ -0.29
HMBOX1-205ENST00000518080 PNPLA6Q8IY17 1366 aa13.25□□□□□ -0.29
HMBOX1-205ENST00000518080 KRT28Q7Z3Y7 464 aa13.25□□□□□ -0.29
HMBOX1-205ENST00000518080 SLIT3O75094 1523 aa13.24□□□□□ -0.29
HMBOX1-205ENST00000518080 NFAT5O94916 1531 aa13.24□□□□□ -0.29
HMBOX1-205ENST00000518080 TNS3Q68CZ2 1445 aa13.24□□□□□ -0.29
HMBOX1-205ENST00000518080 RTL1A6NKG5 1358 aa13.24□□□□□ -0.29
HMBOX1-205ENST00000518080 FBLN1P23142 703 aa13.24□□□□□ -0.29
HMBOX1-205ENST00000518080 AMPHP49418 695 aa13.24□□□□□ -0.29
HMBOX1-205ENST00000518080 RUNDC1Q96C34 613 aa13.24□□□□□ -0.29
HMBOX1-205ENST00000518080 PXDNQ92626 1479 aa13.23□□□□□ -0.29
HMBOX1-205ENST00000518080 RGPD1P0DJD0 1748 aa13.23□□□□□ -0.29
HMBOX1-205ENST00000518080 NEFLP07196 543 aa13.23□□□□□ -0.29
HMBOX1-205ENST00000518080 PDE3BQ13370 1112 aa13.23□□□□□ -0.29
HMBOX1-205ENST00000518080 NGEFQ8N5V2 710 aa13.23□□□□□ -0.29
HMBOX1-205ENST00000518080 KCNH5Q8NCM2 988 aa13.23□□□□□ -0.29
HMBOX1-205ENST00000518080 KIF24Q5T7B8 1368 aa13.22□□□□□ -0.29
HMBOX1-205ENST00000518080 MAP3K19Q56UN5 1328 aa13.22□□□□□ -0.29
HMBOX1-205ENST00000518080 LTBP4Q8N2S1 1624 aa13.22□□□□□ -0.29
HMBOX1-205ENST00000518080 ZBTB7CA1YPR0 619 aa13.22□□□□□ -0.29
HMBOX1-205ENST00000518080 APAF1O14727 1248 aa13.22□□□□□ -0.29
HMBOX1-205ENST00000518080 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
HMBOX1-205ENST00000518080 CRYBG1Q9Y4K1 1723 aa13.22□□□□□ -0.29
HMBOX1-205ENST00000518080 ROBO1Q9Y6N7 1651 aa13.21□□□□□ -0.29
HMBOX1-205ENST00000518080 ARHGEF10O15013 1369 aa13.21□□□□□ -0.29
HMBOX1-205ENST00000518080 MED1Q15648 1581 aaPredicted RBP13.21□□□□□ -0.29
HMBOX1-205ENST00000518080 DLG5Q8TDM6 1919 aa13.21□□□□□ -0.3
HMBOX1-205ENST00000518080 ABCA3Q99758 1704 aa13.2□□□□□ -0.3
HMBOX1-205ENST00000518080 BRINP3Q76B58 766 aa13.2□□□□□ -0.3
HMBOX1-205ENST00000518080 SLAIN2Q9P270 581 aa13.2□□□□□ -0.3
HMBOX1-205ENST00000518080 GTF3C3Q9Y5Q9 886 aa13.19□□□□□ -0.3
HMBOX1-205ENST00000518080 RGPD5Q99666 1765 aa13.19□□□□□ -0.3
HMBOX1-205ENST00000518080 USP19O94966 1318 aa13.18□□□□□ -0.3
HMBOX1-205ENST00000518080 HAX1O00165 279 aa13.18□□□□□ -0.3
HMBOX1-205ENST00000518080 IL13P35225 146 aa13.18□□□□□ -0.3
HMBOX1-205ENST00000518080 EIF4A2Q14240 407 aaKnown RBP13.18□□□□□ -0.3
HMBOX1-205ENST00000518080 NEUROD2Q15784 382 aa13.18□□□□□ -0.3
HMBOX1-205ENST00000518080 TCP11L2Q8N4U5 519 aa13.18□□□□□ -0.3
HMBOX1-205ENST00000518080 DDX17Q92841 729 aaKnown RBP13.18□□□□□ -0.3
HMBOX1-205ENST00000518080 FAM208AQ9UK61 1670 aaKnown RBP13.18□□□□□ -0.3
HMBOX1-205ENST00000518080 FCHSD2O94868 740 aa13.17□□□□□ -0.3
HMBOX1-205ENST00000518080 HMOX1P09601 288 aa13.17□□□□□ -0.3
HMBOX1-205ENST00000518080 PRKAR2BP31323 418 aa13.17□□□□□ -0.3
HMBOX1-205ENST00000518080 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
HMBOX1-205ENST00000518080 RRP7AQ9Y3A4 280 aaKnown RBP13.17□□□□□ -0.3
HMBOX1-205ENST00000518080 RGPD2P0DJD1 1756 aa13.17□□□□□ -0.3
HMBOX1-205ENST00000518080 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
HMBOX1-205ENST00000518080 HOXC9P31274 260 aa13.16□□□□□ -0.3
HMBOX1-205ENST00000518080 HSP90AB2PQ58FF8 381 aa13.16□□□□□ -0.3
HMBOX1-205ENST00000518080 SPATA31A3Q5VYP0 1347 aa13.15□□□□□ -0.3
HMBOX1-205ENST00000518080 ABCC6O95255 1503 aa13.15□□□□□ -0.3
HMBOX1-205ENST00000518080 AHDC1Q5TGY3 1603 aaPredicted RBP13.15□□□□□ -0.3
HMBOX1-205ENST00000518080 HAP1P54257 671 aaPredicted RBP13.15□□□□□ -0.3
HMBOX1-205ENST00000518080 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
HMBOX1-205ENST00000518080 GCP02774 474 aa13.14□□□□□ -0.31
HMBOX1-205ENST00000518080 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
HMBOX1-205ENST00000518080 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
HMBOX1-205ENST00000518080 FXR2P51116 673 aaKnown RBP eCLIP13.13□□□□□ -0.31
HMBOX1-205ENST00000518080 SULT6B1Q6IMI4 303 aa13.13□□□□□ -0.31
HMBOX1-205ENST00000518080 PLEKHF1Q96S99 279 aa13.13□□□□□ -0.31
HMBOX1-205ENST00000518080 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
HMBOX1-205ENST00000518080 CAMTA1Q9Y6Y1 1673 aa13.12□□□□□ -0.31
HMBOX1-205ENST00000518080 E9PSI1 815 aa13.12□□□□□ -0.31
HMBOX1-205ENST00000518080 TMPOP42166 694 aaKnown RBP13.12□□□□□ -0.31
HMBOX1-205ENST00000518080 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
HMBOX1-205ENST00000518080 IP6K1Q92551 441 aa13.12□□□□□ -0.31
HMBOX1-205ENST00000518080 SOS2Q07890 1332 aaPredicted RBP13.12□□□□□ -0.31
HMBOX1-205ENST00000518080 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
HMBOX1-205ENST00000518080 CCDC27Q2M243 656 aa13.11□□□□□ -0.31
HMBOX1-205ENST00000518080 WWC1Q8IX03 1113 aa13.11□□□□□ -0.31
HMBOX1-205ENST00000518080 CDCA7LQ96GN5 454 aa13.11□□□□□ -0.31
HMBOX1-205ENST00000518080 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
HMBOX1-205ENST00000518080 IGSF1Q8N6C5 1336 aa13.11□□□□□ -0.31
HMBOX1-205ENST00000518080 COL18A1P39060 1754 aa13.1□□□□□ -0.31
HMBOX1-205ENST00000518080 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
HMBOX1-205ENST00000518080 RIPK4P57078 832 aa13.1□□□□□ -0.31
HMBOX1-205ENST00000518080 ARHGEF25Q86VW2 580 aa13.1□□□□□ -0.31
HMBOX1-205ENST00000518080 AEBP1Q8IUX7 1158 aa13.1□□□□□ -0.31
HMBOX1-205ENST00000518080 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
HMBOX1-205ENST00000518080 ZC3H6P61129 1189 aaKnown RBP13.09□□□□□ -0.31
HMBOX1-205ENST00000518080 CALD1Q05682 793 aaKnown RBP13.09□□□□□ -0.31
HMBOX1-205ENST00000518080 WDR63Q8IWG1 891 aa13.09□□□□□ -0.31
HMBOX1-205ENST00000518080 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
HMBOX1-205ENST00000518080 KDRP35968 1356 aa13.08□□□□□ -0.31
HMBOX1-205ENST00000518080 ZBTB22O15209 634 aa13.08□□□□□ -0.32
HMBOX1-205ENST00000518080 TOM1O60784 492 aa13.08□□□□□ -0.32
HMBOX1-205ENST00000518080 SLFN5Q08AF3 891 aa13.08□□□□□ -0.32
HMBOX1-205ENST00000518080 RCAN3Q9UKA8 241 aa13.08□□□□□ -0.32
HMBOX1-205ENST00000518080 COL22A1Q8NFW1 1626 aaPredicted RBP13.08□□□□□ -0.32
HMBOX1-205ENST00000518080 FKBP8Q14318 412 aa13.07□□□□□ -0.32
HMBOX1-205ENST00000518080 CABLES1Q8TDN4 633 aa13.07□□□□□ -0.32
HMBOX1-205ENST00000518080 ANKRD24Q8TF21 1146 aa13.07□□□□□ -0.32
HMBOX1-205ENST00000518080 EYA1Q99502 592 aa13.07□□□□□ -0.32
HMBOX1-205ENST00000518080 CPDO75976 1380 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms