RNA–Protein interactions for RNA: ENST00000516460.1

RNU4ATAC12P-201, Transcript of RNA, U4atac small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4ATAC12P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC12P-201ENST00000516460 AAMPQ13685 434 aa12.15□□□□□ -0.46
RNU4ATAC12P-201ENST00000516460 MAP3K19Q56UN5 1328 aa12.14□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 MS4A1P11836 297 aa12.14□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 NLRP6P59044 892 aa12.14□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 C20orf194Q5TEA3 1177 aa12.14□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 C14orf37Q86TY3 774 aa12.14□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 PROSER2Q86WR7 435 aaPredicted RBP12.13□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 ZNF428Q96B54 188 aa12.13□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 DCCP43146 1447 aa12.12□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 AMPHP49418 695 aa12.12□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 GNAI1P63096 354 aa12.12□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 ABTB2Q8N961 1025 aa12.12□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 PHACTR3Q96KR7 559 aa12.12□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 IFT57Q9NWB7 429 aa12.12□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 PHRF1Q9P1Y6 1649 aaKnown RBP12.11□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 LTN1O94822 1766 aa12.11□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 EXOSC9Q06265 439 aaKnown RBP12.11□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 HSP90AB2PQ58FF8 381 aa12.11□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 SULT6B1Q6IMI4 303 aa12.11□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 TSR2Q969E8 191 aaKnown RBP12.11□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 KDRP35968 1356 aa12.1□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 PSME1Q06323 249 aa12.1□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 ESCO1Q5FWF5 840 aa12.1□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 CENPQQ7L2Z9 268 aaPredicted RBP12.1□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 C19orf44Q9H6X5 657 aa12.1□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 NFAT5O94916 1531 aa12.1□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 IGSF1Q8N6C5 1336 aa12.1□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 TRPM3Q9HCF6 1732 aaPredicted RBP12.09□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 TCERG1O14776 1098 aaKnown RBP12.09□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 ALDH1L2Q3SY69 923 aa12.09□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 KCNH5Q8NCM2 988 aa12.09□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 RBM19Q9Y4C8 960 aaKnown RBP12.09□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 C1orf167Q5SNV9 1468 aa12.08□□□□□ -0.47
RNU4ATAC12P-201ENST00000516460 STRCP1A6NGW2 1772 aa12.08□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 SOX12O15370 315 aa12.08□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 ZNF853P0CG23 659 aa12.08□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 HOXC9P31274 260 aa12.08□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 FRAT1Q92837 279 aaPredicted RBP12.08□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 MST1RQ04912 1400 aa12.08□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 KDM2BQ8NHM5 1336 aa12.08□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 KIF16BQ96L93 1317 aa12.08□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 SLIT3O75094 1523 aa12.07□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 IPO8O15397 1037 aaKnown RBP12.07□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 BRPF1P55201 1214 aaPredicted RBP12.07□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 AEBP1Q8IUX7 1158 aa12.07□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 CFAP44Q96MT7 982 aa12.07□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 SMC4Q9NTJ3 1288 aa12.07□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 GAS2L2Q8NHY3 880 aa12.06□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 CLUAP1Q96AJ1 413 aa12.06□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 TMEM94Q12767 1356 aa12.05□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 ATF3P18847 181 aa12.05□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 NUTM2GQ5VZR2 741 aa12.05□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 DZIP1LQ8IYY4 767 aaKnown RBP12.05□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 PANK1Q8TE04 598 aa12.05□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 SSH1Q8WYL5 1049 aa12.05□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 IP6K1Q92551 441 aa12.05□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 EYA1Q99502 592 aa12.05□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 COG6Q9Y2V7 657 aa12.05□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 HTATSF1O43719 755 aaKnown RBP12.04□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 FTSJ3Q8IY81 847 aaKnown RBP12.04□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 BCL2L13Q9BXK5 485 aa12.04□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 MBIPQ9NS73 344 aa12.04□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 LAS1LQ9Y4W2 734 aaKnown RBP12.04□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 USP19O94966 1318 aa12.04□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 LMTK3Q96Q04 1460 aa12.03□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 MVPQ14764 893 aaKnown RBP12.03□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 ATF7IPQ6VMQ6 1270 aa12.03□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 CADPS2Q86UW7 1296 aa12.03□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 ORAI2Q96SN7 254 aa12.03□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 THUMPD2Q9BTF0 503 aaKnown RBP12.03□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 LRRC37A3O60309 1634 aa12.03□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 KIAA0232Q92628 1395 aa12.03□□□□□ -0.48
RNU4ATAC12P-201ENST00000516460 FOXO3O43524 673 aa12.02□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 VAMP4O75379 141 aa12.02□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 KRT28Q7Z3Y7 464 aa12.02□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 RTF1Q92541 710 aaKnown RBP12.02□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 ARHGAP45Q92619 1136 aa12.02□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 MSH6P52701 1360 aa12.02□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 STRCQ7RTU9 1775 aa12.02□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 CHL1O00533 1208 aa12.01□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 RLBP1P12271 317 aa12.01□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 CHMP4BQ9H444 224 aaKnown RBP12.01□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 DDX19BQ9UMR2 479 aa12.01□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 XIRP1Q702N8 1843 aaKnown RBP12.01□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 CRB1P82279 1406 aa12.01□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 FAM83GA6ND36 823 aa12□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 TRIM27P14373 513 aa12□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 MTHFSDQ2M296 383 aaKnown RBP12□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 TWISTNBQ3B726 338 aaPredicted RBP12□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 NOB1Q9ULX3 412 aaKnown RBP12□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 CAMTA1Q9Y6Y1 1673 aa12□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 GCP02774 474 aa11.99□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 HSPA2P54652 639 aa11.99□□□□□ -0.49
RNU4ATAC12P-201ENST00000516460 ARHGEF25Q86VW2 580 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms