RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 PPP4R2Q9NY27 417 aa7.78□□□□□ -1.16
RN7SKP288-201ENST00000516227 USP31Q70CQ4 1352 aa7.78□□□□□ -1.16
RN7SKP288-201ENST00000516227 SCN11AQ9UI33 1791 aa7.77□□□□□ -1.17
RN7SKP288-201ENST00000516227 C1orf167Q5SNV9 1468 aa7.77□□□□□ -1.17
RN7SKP288-201ENST00000516227 SBNO1A3KN83 1393 aa7.77□□□□□ -1.17
RN7SKP288-201ENST00000516227 MSH6P52701 1360 aa7.77□□□□□ -1.17
RN7SKP288-201ENST00000516227 TMEM94Q12767 1356 aa7.77□□□□□ -1.17
RN7SKP288-201ENST00000516227 IL13P35225 146 aa7.77□□□□□ -1.17
RN7SKP288-201ENST00000516227 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.77□□□□□ -1.17
RN7SKP288-201ENST00000516227 PLEKHF1Q96S99 279 aa7.77□□□□□ -1.17
RN7SKP288-201ENST00000516227 RSPH6AQ9H0K4 717 aa7.77□□□□□ -1.17
RN7SKP288-201ENST00000516227 NHSL1Q5SYE7 1610 aa7.77□□□□□ -1.17
RN7SKP288-201ENST00000516227 RNF123Q5XPI4 1314 aa7.77□□□□□ -1.17
RN7SKP288-201ENST00000516227 LMO7Q8WWI1 1683 aa7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 FLT4P35916 1363 aa7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 FOXO3O43524 673 aa7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 XPCQ01831 940 aaPredicted RBP7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 EIF4A2Q14240 407 aaKnown RBP7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 CCDC27Q2M243 656 aa7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 KRT28Q7Z3Y7 464 aa7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 MYH16Q9H6N6 1097 aa7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 SPINK5Q9NQ38 1064 aaPredicted RBP7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 DMRT2Q9Y5R5 561 aa7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 COL18A1P39060 1754 aa7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 DCCP43146 1447 aa7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 MST1RQ04912 1400 aa7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 NCOA3Q9Y6Q9 1424 aa7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 MAP3K19Q56UN5 1328 aa7.76□□□□□ -1.17
RN7SKP288-201ENST00000516227 NFAT5O94916 1531 aa7.75□□□□□ -1.17
RN7SKP288-201ENST00000516227 PLIN1O60240 522 aa7.75□□□□□ -1.17
RN7SKP288-201ENST00000516227 NFE2L2Q16236 605 aa7.75□□□□□ -1.17
RN7SKP288-201ENST00000516227 NCBP3Q53F19 620 aaKnown RBP7.75□□□□□ -1.17
RN7SKP288-201ENST00000516227 HSP90AB2PQ58FF8 381 aa7.75□□□□□ -1.17
RN7SKP288-201ENST00000516227 TRMT2AQ8IZ69 625 aaKnown RBP7.75□□□□□ -1.17
RN7SKP288-201ENST00000516227 LTV1Q96GA3 475 aaPredicted RBP7.75□□□□□ -1.17
RN7SKP288-201ENST00000516227 LAS1LQ9Y4W2 734 aaKnown RBP7.75□□□□□ -1.17
RN7SKP288-201ENST00000516227 SIPA1L3O60292 1781 aaPredicted RBP7.74□□□□□ -1.17
RN7SKP288-201ENST00000516227 SLIT3O75094 1523 aa7.74□□□□□ -1.17
RN7SKP288-201ENST00000516227 CANXP27824 592 aaKnown RBP7.74□□□□□ -1.17
RN7SKP288-201ENST00000516227 SULT6B1Q6IMI4 303 aa7.74□□□□□ -1.17
RN7SKP288-201ENST00000516227 CADPS2Q86UW7 1296 aa7.74□□□□□ -1.17
RN7SKP288-201ENST00000516227 CCDC136Q96JN2 1154 aa7.74□□□□□ -1.17
RN7SKP288-201ENST00000516227 PARP4Q9UKK3 1724 aaKnown RBP7.73□□□□□ -1.17
RN7SKP288-201ENST00000516227 LMOD3Q0VAK6 560 aa7.73□□□□□ -1.17
RN7SKP288-201ENST00000516227 B4GALNT3Q6L9W6 998 aa7.73□□□□□ -1.17
RN7SKP288-201ENST00000516227 KCNH5Q8NCM2 988 aa7.73□□□□□ -1.17
RN7SKP288-201ENST00000516227 EXOC6Q8TAG9 804 aa7.73□□□□□ -1.17
RN7SKP288-201ENST00000516227 PHACTR3Q96KR7 559 aa7.73□□□□□ -1.17
RN7SKP288-201ENST00000516227 TRIM35Q9UPQ4 493 aa7.73□□□□□ -1.17
RN7SKP288-201ENST00000516227 KDM3BQ7LBC6 1761 aa7.73□□□□□ -1.17
RN7SKP288-201ENST00000516227 ZNF335Q9H4Z2 1342 aaPredicted RBP7.73□□□□□ -1.17
RN7SKP288-201ENST00000516227 CAMTA1Q9Y6Y1 1673 aa7.73□□□□□ -1.17
RN7SKP288-201ENST00000516227 ARHGEF10O15013 1369 aa7.72□□□□□ -1.17
RN7SKP288-201ENST00000516227 KIF24Q5T7B8 1368 aa7.72□□□□□ -1.17
RN7SKP288-201ENST00000516227 PHLPP1O60346 1717 aa7.72□□□□□ -1.17
RN7SKP288-201ENST00000516227 MED1Q15648 1581 aaPredicted RBP7.72□□□□□ -1.17
RN7SKP288-201ENST00000516227 HOXC9P31274 260 aa7.72□□□□□ -1.17
RN7SKP288-201ENST00000516227 CALD1Q05682 793 aaKnown RBP7.72□□□□□ -1.17
RN7SKP288-201ENST00000516227 AEBP1Q8IUX7 1158 aa7.72□□□□□ -1.17
RN7SKP288-201ENST00000516227 ROBO1Q9Y6N7 1651 aa7.72□□□□□ -1.17
RN7SKP288-201ENST00000516227 IL16Q14005 1332 aa7.72□□□□□ -1.17
RN7SKP288-201ENST00000516227 RTL1A6NKG5 1358 aa7.71□□□□□ -1.17
RN7SKP288-201ENST00000516227 LRRC37A3O60309 1634 aa7.71□□□□□ -1.17
RN7SKP288-201ENST00000516227 BCAR3O75815 825 aa7.71□□□□□ -1.18
RN7SKP288-201ENST00000516227 EXOSC9Q06265 439 aaKnown RBP7.71□□□□□ -1.18
RN7SKP288-201ENST00000516227 DDX17Q92841 729 aaKnown RBP7.71□□□□□ -1.18
RN7SKP288-201ENST00000516227 TSR2Q969E8 191 aaKnown RBP7.71□□□□□ -1.18
RN7SKP288-201ENST00000516227 CRBNQ96SW2 442 aa7.71□□□□□ -1.18
RN7SKP288-201ENST00000516227 NPHP3Q7Z494 1330 aa7.71□□□□□ -1.18
RN7SKP288-201ENST00000516227 FANCIQ9NVI1 1328 aa7.71□□□□□ -1.18
RN7SKP288-201ENST00000516227 N4BP2Q86UW6 1770 aaPredicted RBP7.71□□□□□ -1.18
RN7SKP288-201ENST00000516227 ITGB4P16144 1822 aa7.71□□□□□ -1.18
RN7SKP288-201ENST00000516227 AFDNP55196 1824 aaKnown RBP7.71□□□□□ -1.18
RN7SKP288-201ENST00000516227 WNK3Q9BYP7 1800 aa7.71□□□□□ -1.18
RN7SKP288-201ENST00000516227 AK9Q5TCS8 1911 aa7.7□□□□□ -1.18
RN7SKP288-201ENST00000516227 GNAI1P63096 354 aa7.7□□□□□ -1.18
RN7SKP288-201ENST00000516227 IP6K1Q92551 441 aa7.7□□□□□ -1.18
RN7SKP288-201ENST00000516227 FRAT1Q92837 279 aaPredicted RBP7.7□□□□□ -1.18
RN7SKP288-201ENST00000516227 EYA1Q99502 592 aa7.7□□□□□ -1.18
RN7SKP288-201ENST00000516227 TNS3Q68CZ2 1445 aa7.69□□□□□ -1.18
RN7SKP288-201ENST00000516227 PXDNQ92626 1479 aa7.69□□□□□ -1.18
RN7SKP288-201ENST00000516227 GCP02774 474 aa7.69□□□□□ -1.18
RN7SKP288-201ENST00000516227 RTF1Q92541 710 aaKnown RBP7.69□□□□□ -1.18
RN7SKP288-201ENST00000516227 THUMPD2Q9BTF0 503 aaKnown RBP7.69□□□□□ -1.18
RN7SKP288-201ENST00000516227 IGSF1Q8N6C5 1336 aa7.69□□□□□ -1.18
RN7SKP288-201ENST00000516227 PKD1L3Q7Z443 1732 aa7.69□□□□□ -1.18
RN7SKP288-201ENST00000516227 FAM83GA6ND36 823 aa7.68□□□□□ -1.18
RN7SKP288-201ENST00000516227 CT47B1P0C2W7 299 aaPredicted RBP7.68□□□□□ -1.18
RN7SKP288-201ENST00000516227 RARSP54136 660 aaKnown RBP7.68□□□□□ -1.18
RN7SKP288-201ENST00000516227 ZC3H6P61129 1189 aaKnown RBP7.68□□□□□ -1.18
RN7SKP288-201ENST00000516227 DCTN1Q14203 1278 aa7.68□□□□□ -1.18
RN7SKP288-201ENST00000516227 C20orf194Q5TEA3 1177 aa7.68□□□□□ -1.18
RN7SKP288-201ENST00000516227 USHBP1Q8N6Y0 703 aa7.68□□□□□ -1.18
RN7SKP288-201ENST00000516227 BCL2L13Q9BXK5 485 aa7.68□□□□□ -1.18
RN7SKP288-201ENST00000516227 SHANK3Q9BYB0 1731 aa7.67□□□□□ -1.18
RN7SKP288-201ENST00000516227 HAP1P54257 671 aaPredicted RBP7.67□□□□□ -1.18
RN7SKP288-201ENST00000516227 MTHFSDQ2M296 383 aaKnown RBP7.67□□□□□ -1.18
RN7SKP288-201ENST00000516227 GAS2L2Q8NHY3 880 aa7.67□□□□□ -1.18
RN7SKP288-201ENST00000516227 SMC4Q9NTJ3 1288 aa7.67□□□□□ -1.18
RN7SKP288-201ENST00000516227 IFT57Q9NWB7 429 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms