RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 ABTB2Q8N961 1025 aa9.78□□□□□ -0.84
SMAD1-213ENST00000514778 MON2Q7Z3U7 1717 aa9.78□□□□□ -0.84
SMAD1-213ENST00000514778 WASHC2AQ641Q2 1341 aa9.78□□□□□ -0.84
SMAD1-213ENST00000514778 NRKQ7Z2Y5 1582 aa9.77□□□□□ -0.85
SMAD1-213ENST00000514778 SLC39A7Q92504 469 aa9.77□□□□□ -0.85
SMAD1-213ENST00000514778 USP19O94966 1318 aa9.77□□□□□ -0.85
SMAD1-213ENST00000514778 MYOM1P52179 1685 aa9.77□□□□□ -0.85
SMAD1-213ENST00000514778 C7P10643 843 aa9.76□□□□□ -0.85
SMAD1-213ENST00000514778 TIE1P35590 1138 aa9.76□□□□□ -0.85
SMAD1-213ENST00000514778 KCNH5Q8NCM2 988 aa9.76□□□□□ -0.85
SMAD1-213ENST00000514778 USP54Q70EL1 1684 aa9.75□□□□□ -0.85
SMAD1-213ENST00000514778 NLRP6P59044 892 aa9.75□□□□□ -0.85
SMAD1-213ENST00000514778 LMOD2Q6P5Q4 547 aa9.75□□□□□ -0.85
SMAD1-213ENST00000514778 CARD14Q9BXL6 1004 aa9.75□□□□□ -0.85
SMAD1-213ENST00000514778 METRNQ9UJH8 293 aa9.75□□□□□ -0.85
SMAD1-213ENST00000514778 CGNL1Q0VF96 1302 aa9.75□□□□□ -0.85
SMAD1-213ENST00000514778 NSD2O96028 1365 aa9.75□□□□□ -0.85
SMAD1-213ENST00000514778 ATN1P54259 1190 aaPredicted RBP9.74□□□□□ -0.85
SMAD1-213ENST00000514778 POLR3GLQ9BT43 218 aa9.74□□□□□ -0.85
SMAD1-213ENST00000514778 PANK3Q9H999 370 aa9.74□□□□□ -0.85
SMAD1-213ENST00000514778 BMP2KQ9NSY1 1161 aaPredicted RBP9.74□□□□□ -0.85
SMAD1-213ENST00000514778 PCDHB13Q9Y5F0 798 aa9.74□□□□□ -0.85
SMAD1-213ENST00000514778 CPDO75976 1380 aa9.74□□□□□ -0.85
SMAD1-213ENST00000514778 SLIT3O75094 1523 aa9.73□□□□□ -0.85
SMAD1-213ENST00000514778 FYB1O15117 783 aa9.73□□□□□ -0.85
SMAD1-213ENST00000514778 GCP02774 474 aa9.73□□□□□ -0.85
SMAD1-213ENST00000514778 TRPC6Q9Y210 931 aa9.73□□□□□ -0.85
SMAD1-213ENST00000514778 PIK3C2AO00443 1686 aa9.73□□□□□ -0.85
SMAD1-213ENST00000514778 NPC1L1Q9UHC9 1359 aa9.73□□□□□ -0.85
SMAD1-213ENST00000514778 OVOS2A0A0J9YW53 1432 aa9.73□□□□□ -0.85
SMAD1-213ENST00000514778 OVOS2Q6IE36 1432 aa9.73□□□□□ -0.85
SMAD1-213ENST00000514778 NSD3Q9BZ95 1437 aa9.73□□□□□ -0.85
SMAD1-213ENST00000514778 PER1O15534 1290 aaPredicted RBP9.72□□□□□ -0.85
SMAD1-213ENST00000514778 HAP1P54257 671 aaPredicted RBP9.72□□□□□ -0.85
SMAD1-213ENST00000514778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMAD1-213ENST00000514778 KLHL34Q8N239 644 aa9.72□□□□□ -0.85
SMAD1-213ENST00000514778 FNBP4Q8N3X1 1017 aaPredicted RBP9.72□□□□□ -0.85
SMAD1-213ENST00000514778 COG3Q96JB2 828 aa9.72□□□□□ -0.85
SMAD1-213ENST00000514778 KNSTRNQ9Y448 316 aa9.72□□□□□ -0.85
SMAD1-213ENST00000514778 LRP6O75581 1613 aa9.71□□□□□ -0.85
SMAD1-213ENST00000514778 NUTM2BA6NNL0 878 aaPredicted RBP9.71□□□□□ -0.86
SMAD1-213ENST00000514778 NUTM2EB1AL46 878 aaPredicted RBP9.71□□□□□ -0.86
SMAD1-213ENST00000514778 DCAF8Q5TAQ9 597 aa9.71□□□□□ -0.86
SMAD1-213ENST00000514778 MEX3CQ5U5Q3 659 aaKnown RBP9.71□□□□□ -0.86
SMAD1-213ENST00000514778 NME9Q86XW9 330 aa9.71□□□□□ -0.86
SMAD1-213ENST00000514778 NUTM2AQ8IVF1 878 aaPredicted RBP9.71□□□□□ -0.86
SMAD1-213ENST00000514778 ABCC6O95255 1503 aa9.71□□□□□ -0.86
SMAD1-213ENST00000514778 CRYBG1Q9Y4K1 1723 aa9.7□□□□□ -0.86
SMAD1-213ENST00000514778 POTEB2H3BUK9 544 aa9.7□□□□□ -0.86
SMAD1-213ENST00000514778 ZNF772Q68DY9 489 aaPredicted RBP9.7□□□□□ -0.86
SMAD1-213ENST00000514778 CABLES1Q8TDN4 633 aa9.7□□□□□ -0.86
SMAD1-213ENST00000514778 KIF24Q5T7B8 1368 aa9.7□□□□□ -0.86
SMAD1-213ENST00000514778 ABCA3Q99758 1704 aa9.7□□□□□ -0.86
SMAD1-213ENST00000514778 ZNF316A6NFI3 1004 aaPredicted RBP9.69□□□□□ -0.86
SMAD1-213ENST00000514778 AMER1Q5JTC6 1135 aaPredicted RBP9.69□□□□□ -0.86
SMAD1-213ENST00000514778 NUTM2GQ5VZR2 741 aa9.69□□□□□ -0.86
SMAD1-213ENST00000514778 AATKQ6ZMQ8 1374 aa9.69□□□□□ -0.86
SMAD1-213ENST00000514778 ARHGEF25Q86VW2 580 aa9.69□□□□□ -0.86
SMAD1-213ENST00000514778 NGLY1Q96IV0 654 aa9.69□□□□□ -0.86
SMAD1-213ENST00000514778 PHRF1Q9P1Y6 1649 aaKnown RBP9.69□□□□□ -0.86
SMAD1-213ENST00000514778 SLIT2O94813 1529 aa9.68□□□□□ -0.86
SMAD1-213ENST00000514778 NFAT5O94916 1531 aa9.68□□□□□ -0.86
SMAD1-213ENST00000514778 KIAA0232Q92628 1395 aa9.68□□□□□ -0.86
SMAD1-213ENST00000514778 FAM83GA6ND36 823 aa9.68□□□□□ -0.86
SMAD1-213ENST00000514778 TTLL13PA6NNM8 815 aa9.68□□□□□ -0.86
SMAD1-213ENST00000514778 ADAMTS2O95450 1211 aa9.68□□□□□ -0.86
SMAD1-213ENST00000514778 IFNL1Q8IU54 200 aa9.68□□□□□ -0.86
SMAD1-213ENST00000514778 GGNBP2Q9H3C7 697 aa9.68□□□□□ -0.86
SMAD1-213ENST00000514778 PRDM11Q9NQV5 511 aa9.68□□□□□ -0.86
SMAD1-213ENST00000514778 COL14A1Q05707 1796 aaKnown RBP9.68□□□□□ -0.86
SMAD1-213ENST00000514778 MARF1Q9Y4F3 1742 aaKnown RBP9.68□□□□□ -0.86
SMAD1-213ENST00000514778 C8orf37Q96NL8 207 aa9.67□□□□□ -0.86
SMAD1-213ENST00000514778 RTL1A6NKG5 1358 aa9.66□□□□□ -0.86
SMAD1-213ENST00000514778 KIF20BQ96Q89 1820 aa9.66□□□□□ -0.86
SMAD1-213ENST00000514778 NWD2Q9ULI1 1742 aa9.66□□□□□ -0.86
SMAD1-213ENST00000514778 ZC3H6P61129 1189 aaKnown RBP9.66□□□□□ -0.86
SMAD1-213ENST00000514778 GSE1Q14687 1217 aa9.66□□□□□ -0.86
SMAD1-213ENST00000514778 UNC5CLQ8IV45 518 aa9.66□□□□□ -0.86
SMAD1-213ENST00000514778 OTUD5Q96G74 571 aa9.66□□□□□ -0.86
SMAD1-213ENST00000514778 BCL9LQ86UU0 1499 aa9.66□□□□□ -0.86
SMAD1-213ENST00000514778 BLMP54132 1417 aaPredicted RBP9.65□□□□□ -0.86
SMAD1-213ENST00000514778 AFF2P51816 1311 aa9.65□□□□□ -0.86
SMAD1-213ENST00000514778 MORC1Q86VD1 984 aa9.65□□□□□ -0.86
SMAD1-213ENST00000514778 USP21Q9UK80 565 aa9.65□□□□□ -0.86
SMAD1-213ENST00000514778 TRPC5Q9UL62 973 aaPredicted RBP9.65□□□□□ -0.86
SMAD1-213ENST00000514778 ANKRD26Q9UPS8 1709 aa9.65□□□□□ -0.87
SMAD1-213ENST00000514778 PYGBP11216 843 aa9.64□□□□□ -0.87
SMAD1-213ENST00000514778 VPS72Q15906 364 aa9.64□□□□□ -0.87
SMAD1-213ENST00000514778 IP6K1Q92551 441 aa9.64□□□□□ -0.87
SMAD1-213ENST00000514778 BTG4Q9NY30 223 aa9.64□□□□□ -0.87
SMAD1-213ENST00000514778 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.64□□□□□ -0.87
SMAD1-213ENST00000514778 LMO7Q8WWI1 1683 aa9.64□□□□□ -0.87
SMAD1-213ENST00000514778 MAP3K19Q56UN5 1328 aa9.63□□□□□ -0.87
SMAD1-213ENST00000514778 DDX10Q13206 875 aaKnown RBP9.63□□□□□ -0.87
SMAD1-213ENST00000514778 RGS17Q9UGC6 210 aaPredicted RBP9.63□□□□□ -0.87
SMAD1-213ENST00000514778 ATRNO75882 1429 aa9.63□□□□□ -0.87
SMAD1-213ENST00000514778 SMG6Q86US8 1419 aaKnown RBP9.63□□□□□ -0.87
SMAD1-213ENST00000514778 FLT4P35916 1363 aa9.63□□□□□ -0.87
SMAD1-213ENST00000514778 CAMTA1Q9Y6Y1 1673 aa9.62□□□□□ -0.87
SMAD1-213ENST00000514778 AMPHP49418 695 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms