RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 RARSP54136 660 aaKnown RBP19.39■□□□□ 0.7
VCAN-211ENST00000513984 NLRP6P59044 892 aa19.39■□□□□ 0.69
VCAN-211ENST00000513984 HSP90AB2PQ58FF8 381 aa19.38■□□□□ 0.69
VCAN-211ENST00000513984 TRPM3Q9HCF6 1732 aaPredicted RBP19.37■□□□□ 0.69
VCAN-211ENST00000513984 C14orf37Q86TY3 774 aa19.37■□□□□ 0.69
VCAN-211ENST00000513984 ARHGEF10O15013 1369 aa19.37■□□□□ 0.69
VCAN-211ENST00000513984 PROSER2Q86WR7 435 aaPredicted RBP19.37■□□□□ 0.69
VCAN-211ENST00000513984 PHRF1Q9P1Y6 1649 aaKnown RBP19.36■□□□□ 0.69
VCAN-211ENST00000513984 ABTB2Q8N961 1025 aa19.36■□□□□ 0.69
VCAN-211ENST00000513984 SOX12O15370 315 aa19.35■□□□□ 0.69
VCAN-211ENST00000513984 PDE3AQ14432 1141 aa19.35■□□□□ 0.69
VCAN-211ENST00000513984 ESCO1Q5FWF5 840 aa19.35■□□□□ 0.69
VCAN-211ENST00000513984 TSR2Q969E8 191 aaKnown RBP19.35■□□□□ 0.69
VCAN-211ENST00000513984 NFAT5O94916 1531 aa19.35■□□□□ 0.69
VCAN-211ENST00000513984 NCOA3Q9Y6Q9 1424 aa19.35■□□□□ 0.69
VCAN-211ENST00000513984 CALD1Q05682 793 aaKnown RBP19.34■□□□□ 0.69
VCAN-211ENST00000513984 LMOD3Q0VAK6 560 aa19.34■□□□□ 0.69
VCAN-211ENST00000513984 DCCP43146 1447 aa19.33■□□□□ 0.69
VCAN-211ENST00000513984 PAK3O75914 559 aaPredicted RBP19.33■□□□□ 0.69
VCAN-211ENST00000513984 SULT6B1Q6IMI4 303 aa19.33■□□□□ 0.69
VCAN-211ENST00000513984 AEBP1Q8IUX7 1158 aa19.33■□□□□ 0.69
VCAN-211ENST00000513984 RTL1A6NKG5 1358 aa19.33■□□□□ 0.69
VCAN-211ENST00000513984 STRCQ7RTU9 1775 aa19.33■□□□□ 0.69
VCAN-211ENST00000513984 C1orf167Q5SNV9 1468 aa19.32■□□□□ 0.68
VCAN-211ENST00000513984 KDRP35968 1356 aa19.32■□□□□ 0.68
VCAN-211ENST00000513984 AMPHP49418 695 aa19.32■□□□□ 0.68
VCAN-211ENST00000513984 EXOSC9Q06265 439 aaKnown RBP19.32■□□□□ 0.68
VCAN-211ENST00000513984 C19orf44Q9H6X5 657 aa19.32■□□□□ 0.68
VCAN-211ENST00000513984 XIRP1Q702N8 1843 aaKnown RBP19.31■□□□□ 0.68
VCAN-211ENST00000513984 LMTK3Q96Q04 1460 aa19.31■□□□□ 0.68
VCAN-211ENST00000513984 PSME1Q06323 249 aa19.31■□□□□ 0.68
VCAN-211ENST00000513984 NUTM2GQ5VZR2 741 aa19.31■□□□□ 0.68
VCAN-211ENST00000513984 IGSF1Q8N6C5 1336 aa19.3■□□□□ 0.68
VCAN-211ENST00000513984 SLIT3O75094 1523 aa19.3■□□□□ 0.68
VCAN-211ENST00000513984 ORAI2Q96SN7 254 aa19.3■□□□□ 0.68
VCAN-211ENST00000513984 IFT57Q9NWB7 429 aa19.3■□□□□ 0.68
VCAN-211ENST00000513984 CANXP27824 592 aaKnown RBP19.29■□□□□ 0.68
VCAN-211ENST00000513984 HOXC9P31274 260 aa19.29■□□□□ 0.68
VCAN-211ENST00000513984 ALS2Q96Q42 1657 aa19.29■□□□□ 0.68
VCAN-211ENST00000513984 TMEM94Q12767 1356 aa19.29■□□□□ 0.68
VCAN-211ENST00000513984 MST1RQ04912 1400 aa19.28■□□□□ 0.68
VCAN-211ENST00000513984 KDM4FA0A1W2PPD8 638 aa19.28■□□□□ 0.68
VCAN-211ENST00000513984 ZNF853P0CG23 659 aa19.28■□□□□ 0.68
VCAN-211ENST00000513984 HSPA2P54652 639 aa19.28■□□□□ 0.68
VCAN-211ENST00000513984 GNAI1P63096 354 aa19.28■□□□□ 0.68
VCAN-211ENST00000513984 FRAT1Q92837 279 aaPredicted RBP19.26■□□□□ 0.67
VCAN-211ENST00000513984 EYA1Q99502 592 aa19.26■□□□□ 0.67
VCAN-211ENST00000513984 THUMPD2Q9BTF0 503 aaKnown RBP19.26■□□□□ 0.67
VCAN-211ENST00000513984 BCL2L13Q9BXK5 485 aa19.26■□□□□ 0.67
VCAN-211ENST00000513984 KDM2BQ8NHM5 1336 aa19.26■□□□□ 0.67
VCAN-211ENST00000513984 FOXO3O43524 673 aa19.25■□□□□ 0.67
VCAN-211ENST00000513984 KCNH5Q8NCM2 988 aa19.25■□□□□ 0.67
VCAN-211ENST00000513984 PANK1Q8TE04 598 aa19.25■□□□□ 0.67
VCAN-211ENST00000513984 ZNF428Q96B54 188 aa19.25■□□□□ 0.67
VCAN-211ENST00000513984 CFAP44Q96MT7 982 aa19.24■□□□□ 0.67
VCAN-211ENST00000513984 RBM19Q9Y4C8 960 aaKnown RBP19.24■□□□□ 0.67
VCAN-211ENST00000513984 ALDH1L2Q3SY69 923 aa19.23■□□□□ 0.67
VCAN-211ENST00000513984 SSH1Q8WYL5 1049 aa19.23■□□□□ 0.67
VCAN-211ENST00000513984 SMC4Q9NTJ3 1288 aa19.23■□□□□ 0.67
VCAN-211ENST00000513984 RGPD2P0DJD1 1756 aa19.23■□□□□ 0.67
VCAN-211ENST00000513984 FAM83GA6ND36 823 aa19.23■□□□□ 0.67
VCAN-211ENST00000513984 AAMPQ13685 434 aa19.23■□□□□ 0.67
VCAN-211ENST00000513984 MBIPQ9NS73 344 aa19.23■□□□□ 0.67
VCAN-211ENST00000513984 LRRC37A3O60309 1634 aa19.22■□□□□ 0.67
VCAN-211ENST00000513984 ATF3P18847 181 aa19.22■□□□□ 0.67
VCAN-211ENST00000513984 ZKSCAN2Q63HK3 967 aa19.22■□□□□ 0.67
VCAN-211ENST00000513984 CENPQQ7L2Z9 268 aaPredicted RBP19.22■□□□□ 0.67
VCAN-211ENST00000513984 IP6K1Q92551 441 aa19.22■□□□□ 0.67
VCAN-211ENST00000513984 COG6Q9Y2V7 657 aa19.22■□□□□ 0.67
VCAN-211ENST00000513984 LAS1LQ9Y4W2 734 aaKnown RBP19.22■□□□□ 0.67
VCAN-211ENST00000513984 USP19O94966 1318 aa19.21■□□□□ 0.67
VCAN-211ENST00000513984 RLBP1P12271 317 aa19.21■□□□□ 0.67
VCAN-211ENST00000513984 MS4A1P11836 297 aa19.21■□□□□ 0.67
VCAN-211ENST00000513984 BRPF1P55201 1214 aaPredicted RBP19.21■□□□□ 0.67
VCAN-211ENST00000513984 KIF16BQ96L93 1317 aa19.2■□□□□ 0.66
VCAN-211ENST00000513984 KRT28Q7Z3Y7 464 aa19.2■□□□□ 0.66
VCAN-211ENST00000513984 TNNQ9UQP3 1299 aa19.2■□□□□ 0.66
VCAN-211ENST00000513984 XPCQ01831 940 aaPredicted RBP19.19■□□□□ 0.66
VCAN-211ENST00000513984 DCTN1Q14203 1278 aa19.19■□□□□ 0.66
VCAN-211ENST00000513984 CLUAP1Q96AJ1 413 aa19.19■□□□□ 0.66
VCAN-211ENST00000513984 CAMTA1Q9Y6Y1 1673 aa19.19■□□□□ 0.66
VCAN-211ENST00000513984 MTHFSDQ2M296 383 aaKnown RBP19.18■□□□□ 0.66
VCAN-211ENST00000513984 CADPS2Q86UW7 1296 aa19.18■□□□□ 0.66
VCAN-211ENST00000513984 MSH6P52701 1360 aa19.18■□□□□ 0.66
VCAN-211ENST00000513984 CRB1P82279 1406 aa19.18■□□□□ 0.66
VCAN-211ENST00000513984 VAMP4O75379 141 aa19.18■□□□□ 0.66
VCAN-211ENST00000513984 GAS2L2Q8NHY3 880 aa19.18■□□□□ 0.66
VCAN-211ENST00000513984 GCP02774 474 aa19.17■□□□□ 0.66
VCAN-211ENST00000513984 DZIP1LQ8IYY4 767 aaKnown RBP19.17■□□□□ 0.66
VCAN-211ENST00000513984 RGPD5Q99666 1765 aa19.17■□□□□ 0.66
VCAN-211ENST00000513984 MED1Q15648 1581 aaPredicted RBP19.17■□□□□ 0.66
VCAN-211ENST00000513984 TCERG1O14776 1098 aaKnown RBP19.16■□□□□ 0.66
VCAN-211ENST00000513984 TRIM27P14373 513 aa19.16■□□□□ 0.66
VCAN-211ENST00000513984 ATF7IPQ6VMQ6 1270 aa19.16■□□□□ 0.66
VCAN-211ENST00000513984 CRYBG1Q9Y4K1 1723 aa19.16■□□□□ 0.66
VCAN-211ENST00000513984 MVPQ14764 893 aaKnown RBP19.16■□□□□ 0.66
VCAN-211ENST00000513984 ARHGEF25Q86VW2 580 aa19.16■□□□□ 0.66
VCAN-211ENST00000513984 CHL1O00533 1208 aa19.15■□□□□ 0.66
VCAN-211ENST00000513984 MCM10Q7L590 875 aa19.15■□□□□ 0.66
VCAN-211ENST00000513984 FTSJ3Q8IY81 847 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms