RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 HMOX1P09601 288 aa16.87■□□□□ 0.29
PVT1-203ENST00000513868 PRKAR2BP31323 418 aa16.87■□□□□ 0.29
PVT1-203ENST00000513868 WDR63Q8IWG1 891 aa16.87■□□□□ 0.29
PVT1-203ENST00000513868 PHRF1Q9P1Y6 1649 aaKnown RBP16.87■□□□□ 0.29
PVT1-203ENST00000513868 FLT4P35916 1363 aa16.86■□□□□ 0.29
PVT1-203ENST00000513868 MAPK8IP3Q9UPT6 1336 aa16.86■□□□□ 0.29
PVT1-203ENST00000513868 TRIM35Q9UPQ4 493 aa16.86■□□□□ 0.29
PVT1-203ENST00000513868 MSH6P52701 1360 aa16.86■□□□□ 0.29
PVT1-203ENST00000513868 KIF24Q5T7B8 1368 aa16.86■□□□□ 0.29
PVT1-203ENST00000513868 XPCQ01831 940 aaPredicted RBP16.85■□□□□ 0.29
PVT1-203ENST00000513868 ERICH6BQ5W0A0 696 aa16.85■□□□□ 0.29
PVT1-203ENST00000513868 CADPS2Q86UW7 1296 aa16.85■□□□□ 0.29
PVT1-203ENST00000513868 PHACTR3Q96KR7 559 aa16.85■□□□□ 0.29
PVT1-203ENST00000513868 SLIT3O75094 1523 aa16.85■□□□□ 0.29
PVT1-203ENST00000513868 KRT28Q7Z3Y7 464 aa16.84■□□□□ 0.29
PVT1-203ENST00000513868 RRP1P56182 461 aaKnown RBP16.83■□□□□ 0.28
PVT1-203ENST00000513868 HOXC9P31274 260 aa16.81■□□□□ 0.28
PVT1-203ENST00000513868 RIPK4P57078 832 aa16.81■□□□□ 0.28
PVT1-203ENST00000513868 AEBP1Q8IUX7 1158 aa16.81■□□□□ 0.28
PVT1-203ENST00000513868 RGPD2P0DJD1 1756 aa16.81■□□□□ 0.28
PVT1-203ENST00000513868 AMPHP49418 695 aa16.81■□□□□ 0.28
PVT1-203ENST00000513868 CRYBG1Q9Y4K1 1723 aa16.8■□□□□ 0.28
PVT1-203ENST00000513868 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
PVT1-203ENST00000513868 ARHGEF10O15013 1369 aa16.8■□□□□ 0.28
PVT1-203ENST00000513868 RGPD5Q99666 1765 aa16.8■□□□□ 0.28
PVT1-203ENST00000513868 USP19O94966 1318 aa16.8■□□□□ 0.28
PVT1-203ENST00000513868 SULT6B1Q6IMI4 303 aa16.79■□□□□ 0.28
PVT1-203ENST00000513868 DDX17Q92841 729 aaKnown RBP16.79■□□□□ 0.28
PVT1-203ENST00000513868 RTL1A6NKG5 1358 aa16.79■□□□□ 0.28
PVT1-203ENST00000513868 PXDNQ92626 1479 aa16.79■□□□□ 0.28
PVT1-203ENST00000513868 MED1Q15648 1581 aaPredicted RBP16.79■□□□□ 0.28
PVT1-203ENST00000513868 KDRP35968 1356 aa16.78■□□□□ 0.28
PVT1-203ENST00000513868 KCNH5Q8NCM2 988 aa16.78■□□□□ 0.28
PVT1-203ENST00000513868 IL16Q14005 1332 aa16.77■□□□□ 0.28
PVT1-203ENST00000513868 IGSF1Q8N6C5 1336 aa16.77■□□□□ 0.28
PVT1-203ENST00000513868 NEFMP07197 916 aa16.77■□□□□ 0.28
PVT1-203ENST00000513868 EYA1Q99502 592 aa16.77■□□□□ 0.28
PVT1-203ENST00000513868 GCP02774 474 aa16.76■□□□□ 0.27
PVT1-203ENST00000513868 IP6K1Q92551 441 aa16.76■□□□□ 0.27
PVT1-203ENST00000513868 NPHP3Q7Z494 1330 aa16.76■□□□□ 0.27
PVT1-203ENST00000513868 BRINP3Q76B58 766 aa16.75■□□□□ 0.27
PVT1-203ENST00000513868 PPP4R2Q9NY27 417 aa16.75■□□□□ 0.27
PVT1-203ENST00000513868 PLIN1O60240 522 aa16.75■□□□□ 0.27
PVT1-203ENST00000513868 MYH16Q9H6N6 1097 aa16.75■□□□□ 0.27
PVT1-203ENST00000513868 LMOD2Q6P5Q4 547 aa16.74■□□□□ 0.27
PVT1-203ENST00000513868 ARHGEF25Q86VW2 580 aa16.74■□□□□ 0.27
PVT1-203ENST00000513868 COL18A1P39060 1754 aa16.73■□□□□ 0.27
PVT1-203ENST00000513868 SLAIN2Q9P270 581 aa16.73■□□□□ 0.27
PVT1-203ENST00000513868 FANCIQ9NVI1 1328 aa16.73■□□□□ 0.27
PVT1-203ENST00000513868 TNS3Q68CZ2 1445 aa16.73■□□□□ 0.27
PVT1-203ENST00000513868 TSR2Q969E8 191 aaKnown RBP16.72■□□□□ 0.27
PVT1-203ENST00000513868 NHSL1Q5SYE7 1610 aa16.72■□□□□ 0.27
PVT1-203ENST00000513868 CAMTA1Q9Y6Y1 1673 aa16.71■□□□□ 0.27
PVT1-203ENST00000513868 BCAR3O75815 825 aa16.71■□□□□ 0.27
PVT1-203ENST00000513868 THUMPD2Q9BTF0 503 aaKnown RBP16.71■□□□□ 0.27
PVT1-203ENST00000513868 SPATA31A3Q5VYP0 1347 aa16.71■□□□□ 0.27
PVT1-203ENST00000513868 FAM83GA6ND36 823 aa16.69■□□□□ 0.26
PVT1-203ENST00000513868 LTBP4Q8N2S1 1624 aa16.69■□□□□ 0.26
PVT1-203ENST00000513868 LTV1Q96GA3 475 aaPredicted RBP16.69■□□□□ 0.26
PVT1-203ENST00000513868 PLEKHG5O94827 1062 aa16.69■□□□□ 0.26
PVT1-203ENST00000513868 ZNF853P0CG23 659 aa16.69■□□□□ 0.26
PVT1-203ENST00000513868 LMOD3Q0VAK6 560 aa16.69■□□□□ 0.26
PVT1-203ENST00000513868 C20orf194Q5TEA3 1177 aa16.69■□□□□ 0.26
PVT1-203ENST00000513868 EXOC6Q8TAG9 804 aa16.69■□□□□ 0.26
PVT1-203ENST00000513868 SOS2Q07890 1332 aaPredicted RBP16.68■□□□□ 0.26
PVT1-203ENST00000513868 RARSP54136 660 aaKnown RBP16.68■□□□□ 0.26
PVT1-203ENST00000513868 EXOSC9Q06265 439 aaKnown RBP16.68■□□□□ 0.26
PVT1-203ENST00000513868 ABCA3Q99758 1704 aa16.68■□□□□ 0.26
PVT1-203ENST00000513868 NCAPD2Q15021 1401 aa16.67■□□□□ 0.26
PVT1-203ENST00000513868 VIRMAQ69YN4 1812 aaKnown RBP16.67■□□□□ 0.26
PVT1-203ENST00000513868 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
PVT1-203ENST00000513868 NBPF6Q5VWK0 638 aa16.67■□□□□ 0.26
PVT1-203ENST00000513868 NBPF4Q96M43 638 aa16.67■□□□□ 0.26
PVT1-203ENST00000513868 AXIN2Q9Y2T1 843 aa16.67■□□□□ 0.26
PVT1-203ENST00000513868 LMO7Q8WWI1 1683 aa16.66■□□□□ 0.26
PVT1-203ENST00000513868 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
PVT1-203ENST00000513868 CT47B1P0C2W7 299 aaPredicted RBP16.66■□□□□ 0.26
PVT1-203ENST00000513868 CALD1Q05682 793 aaKnown RBP16.66■□□□□ 0.26
PVT1-203ENST00000513868 DCTN1Q14203 1278 aa16.66■□□□□ 0.26
PVT1-203ENST00000513868 B4GALNT3Q6L9W6 998 aa16.66■□□□□ 0.26
PVT1-203ENST00000513868 IFT57Q9NWB7 429 aa16.65■□□□□ 0.26
PVT1-203ENST00000513868 LRRC37A3O60309 1634 aa16.65■□□□□ 0.26
PVT1-203ENST00000513868 USHBP1Q8N6Y0 703 aa16.65■□□□□ 0.26
PVT1-203ENST00000513868 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.65■□□□□ 0.26
PVT1-203ENST00000513868 CABLES1Q8TDN4 633 aa16.65■□□□□ 0.26
PVT1-203ENST00000513868 CRBNQ96SW2 442 aa16.65■□□□□ 0.26
PVT1-203ENST00000513868 ZC3H6P61129 1189 aaKnown RBP16.64■□□□□ 0.25
PVT1-203ENST00000513868 GNAI1P63096 354 aa16.64■□□□□ 0.25
PVT1-203ENST00000513868 CFAP44Q96MT7 982 aa16.64■□□□□ 0.25
PVT1-203ENST00000513868 ABCC6O95255 1503 aa16.64■□□□□ 0.25
PVT1-203ENST00000513868 LRRC59Q96AG4 307 aaKnown RBP16.63■□□□□ 0.25
PVT1-203ENST00000513868 FAM208AQ9UK61 1670 aaKnown RBP16.63■□□□□ 0.25
PVT1-203ENST00000513868 CRB1P82279 1406 aa16.62■□□□□ 0.25
PVT1-203ENST00000513868 MCM10Q7L590 875 aa16.62■□□□□ 0.25
PVT1-203ENST00000513868 GAS2L2Q8NHY3 880 aa16.62■□□□□ 0.25
PVT1-203ENST00000513868 ANKRD24Q8TF21 1146 aa16.62■□□□□ 0.25
PVT1-203ENST00000513868 MBIPQ9NS73 344 aa16.62■□□□□ 0.25
PVT1-203ENST00000513868 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
PVT1-203ENST00000513868 ROBO1Q9Y6N7 1651 aa16.62■□□□□ 0.25
PVT1-203ENST00000513868 CPDO75976 1380 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms