RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 SART3Q15020 963 aaKnown RBP10.89□□□□□ -0.67
NEK1-207ENST00000511633 MCM10Q7L590 875 aa10.89□□□□□ -0.67
NEK1-207ENST00000511633 GNAT3A8MTJ3 354 aa10.88□□□□□ -0.67
NEK1-207ENST00000511633 HIP1O00291 1037 aa10.88□□□□□ -0.67
NEK1-207ENST00000511633 NME9Q86XW9 330 aa10.88□□□□□ -0.67
NEK1-207ENST00000511633 BRMS1Q9HCU9 246 aa10.88□□□□□ -0.67
NEK1-207ENST00000511633 TMPOP42166 694 aaKnown RBP10.88□□□□□ -0.67
NEK1-207ENST00000511633 USHBP1Q8N6Y0 703 aa10.88□□□□□ -0.67
NEK1-207ENST00000511633 FAM135AQ9P2D6 1515 aa10.88□□□□□ -0.67
NEK1-207ENST00000511633 CT47B1P0C2W7 299 aaPredicted RBP10.87□□□□□ -0.67
NEK1-207ENST00000511633 DCTN1Q14203 1278 aa10.87□□□□□ -0.67
NEK1-207ENST00000511633 CCDC57Q2TAC2 916 aa10.87□□□□□ -0.67
NEK1-207ENST00000511633 KCNH5Q8NCM2 988 aa10.87□□□□□ -0.67
NEK1-207ENST00000511633 GNL3LQ9NVN8 582 aaKnown RBP10.87□□□□□ -0.67
NEK1-207ENST00000511633 SRGAP3O43295 1099 aa10.87□□□□□ -0.67
NEK1-207ENST00000511633 XBP1P17861 261 aa10.87□□□□□ -0.67
NEK1-207ENST00000511633 ATP2B1P20020 1258 aa10.87□□□□□ -0.67
NEK1-207ENST00000511633 IDI1Q13907 227 aa10.86□□□□□ -0.67
NEK1-207ENST00000511633 BICDL1Q6ZP65 573 aa10.86□□□□□ -0.67
NEK1-207ENST00000511633 AMOTL2Q9Y2J4 779 aa10.86□□□□□ -0.67
NEK1-207ENST00000511633 SF3B2Q13435 895 aaKnown RBP10.86□□□□□ -0.67
NEK1-207ENST00000511633 AACSQ86V21 672 aa10.86□□□□□ -0.67
NEK1-207ENST00000511633 CCDC85AQ96PX6 553 aaPredicted RBP10.86□□□□□ -0.67
NEK1-207ENST00000511633 MPHOSPH8Q99549 860 aa10.86□□□□□ -0.67
NEK1-207ENST00000511633 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.86□□□□□ -0.673e-6■■□□□ 12.4
NEK1-207ENST00000511633 FANCAO15360 1455 aa10.86□□□□□ -0.67
NEK1-207ENST00000511633 C11orf95C9JLR9 678 aaPredicted RBP10.86□□□□□ -0.67
NEK1-207ENST00000511633 IPO7O95373 1038 aaKnown RBP10.85□□□□□ -0.67
NEK1-207ENST00000511633 SLC3A2P08195 630 aaKnown RBP10.85□□□□□ -0.67
NEK1-207ENST00000511633 FKBP4Q02790 459 aaKnown RBP eCLIP10.85□□□□□ -0.67
NEK1-207ENST00000511633 IL1RAPL2Q9NP60 686 aa10.85□□□□□ -0.67
NEK1-207ENST00000511633 EMILIN1Q9Y6C2 1016 aa10.85□□□□□ -0.67
NEK1-207ENST00000511633 SPINK5Q9NQ38 1064 aaPredicted RBP10.85□□□□□ -0.67
NEK1-207ENST00000511633 SLFN5Q08AF3 891 aa10.84□□□□□ -0.67
NEK1-207ENST00000511633 STK3Q13188 491 aa10.84□□□□□ -0.67
NEK1-207ENST00000511633 CHD1LQ86WJ1 897 aa10.84□□□□□ -0.67
NEK1-207ENST00000511633 FOXO3O43524 673 aa10.84□□□□□ -0.67
NEK1-207ENST00000511633 PTCD1O75127 700 aaKnown RBP10.84□□□□□ -0.67
NEK1-207ENST00000511633 NOS1P29475 1434 aa10.84□□□□□ -0.67
NEK1-207ENST00000511633 NCOA1Q15788 1441 aa10.84□□□□□ -0.67
NEK1-207ENST00000511633 RABEP1Q15276 862 aa10.84□□□□□ -0.67
NEK1-207ENST00000511633 NFKBIBQ15653 356 aa10.84□□□□□ -0.67
NEK1-207ENST00000511633 DUSP27Q5VZP5 1158 aa10.84□□□□□ -0.67
NEK1-207ENST00000511633 TMEM57Q8N5G2 664 aa10.84□□□□□ -0.67
NEK1-207ENST00000511633 SDF4Q9BRK5 362 aa10.84□□□□□ -0.67
NEK1-207ENST00000511633 DENND4BO75064 1496 aaPredicted RBP10.84□□□□□ -0.67
NEK1-207ENST00000511633 ATP2B2Q01814 1243 aa10.83□□□□□ -0.67
NEK1-207ENST00000511633 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.67
NEK1-207ENST00000511633 WASLO00401 505 aaPredicted RBP10.83□□□□□ -0.68
NEK1-207ENST00000511633 CEBPZQ03701 1054 aaKnown RBP10.83□□□□□ -0.68
NEK1-207ENST00000511633 HOMER1Q86YM7 354 aa10.83□□□□□ -0.68
NEK1-207ENST00000511633 CYP46A1Q9Y6A2 500 aa10.82□□□□□ -0.68
NEK1-207ENST00000511633 ADAMTS2O95450 1211 aa10.82□□□□□ -0.68
NEK1-207ENST00000511633 OLFM4Q6UX06 510 aa10.82□□□□□ -0.68
NEK1-207ENST00000511633 THOC2Q8NI27 1593 aaKnown RBP10.82□□□□□ -0.68
NEK1-207ENST00000511633 RNF214Q8ND24 703 aa10.82□□□□□ -0.68
NEK1-207ENST00000511633 NACAP1Q9BZK3 213 aa10.82□□□□□ -0.68
NEK1-207ENST00000511633 NUTM1Q86Y26 1132 aa10.81□□□□□ -0.68
NEK1-207ENST00000511633 TMOD3Q9NYL9 352 aa10.81□□□□□ -0.68
NEK1-207ENST00000511633 STARD3NLO95772 234 aa10.81□□□□□ -0.68
NEK1-207ENST00000511633 MCM2P49736 904 aa10.81□□□□□ -0.68
NEK1-207ENST00000511633 RBM5P52756 815 aaKnown RBP eCLIP10.81□□□□□ -0.68
NEK1-207ENST00000511633 CWC27Q6UX04 472 aaKnown RBP10.81□□□□□ -0.68
NEK1-207ENST00000511633 CEP126Q9P2H0 1117 aa10.81□□□□□ -0.68
NEK1-207ENST00000511633 MPRIPQ6WCQ1 1025 aa10.81□□□□□ -0.68
NEK1-207ENST00000511633 PRPF40AO75400 957 aaKnown RBP10.81□□□□□ -0.68
NEK1-207ENST00000511633 EXOC6BQ9Y2D4 811 aa10.81□□□□□ -0.68
NEK1-207ENST00000511633 FIBPO43427 364 aa10.8□□□□□ -0.68
NEK1-207ENST00000511633 CCDC70Q6NSX1 233 aa10.8□□□□□ -0.68
NEK1-207ENST00000511633 CAVIN1Q6NZI2 390 aaKnown RBP10.8□□□□□ -0.68
NEK1-207ENST00000511633 MAP3K1Q13233 1512 aa10.8□□□□□ -0.68
NEK1-207ENST00000511633 IFT57Q9NWB7 429 aa10.8□□□□□ -0.68
NEK1-207ENST00000511633 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
NEK1-207ENST00000511633 NAT10Q9H0A0 1025 aaKnown RBP10.8□□□□□ -0.68
NEK1-207ENST00000511633 PDCP20941 246 aa10.8□□□□□ -0.68
NEK1-207ENST00000511633 NAP1L1P55209 391 aaKnown RBP10.79□□□□□ -0.68
NEK1-207ENST00000511633 TAF7Q15545 349 aaPredicted RBP10.79□□□□□ -0.68
NEK1-207ENST00000511633 NUP133Q8WUM0 1156 aa10.79□□□□□ -0.68
NEK1-207ENST00000511633 ZSCAN25Q6NSZ9 544 aa10.79□□□□□ -0.68
NEK1-207ENST00000511633 PDILTQ8N807 584 aa10.79□□□□□ -0.68
NEK1-207ENST00000511633 RAI14Q9P0K7 980 aa10.79□□□□□ -0.68
NEK1-207ENST00000511633 CCDC69A6NI79 296 aa10.79□□□□□ -0.68
NEK1-207ENST00000511633 RPAP2Q8IXW5 612 aaPredicted RBP10.79□□□□□ -0.68
NEK1-207ENST00000511633 MYD88Q99836 296 aa10.79□□□□□ -0.68
NEK1-207ENST00000511633 IGHMBP2P38935 993 aaKnown RBP10.79□□□□□ -0.68
NEK1-207ENST00000511633 EPS15P42566 896 aa10.79□□□□□ -0.68
NEK1-207ENST00000511633 TRAK2O60296 914 aa10.78□□□□□ -0.68
NEK1-207ENST00000511633 KINO60870 393 aaKnown RBP10.78□□□□□ -0.68
NEK1-207ENST00000511633 STK38Q15208 465 aa10.78□□□□□ -0.68
NEK1-207ENST00000511633 SSH1Q8WYL5 1049 aa10.78□□□□□ -0.68
NEK1-207ENST00000511633 SCAF11Q99590 1463 aaKnown RBP10.78□□□□□ -0.68
NEK1-207ENST00000511633 DHX29Q7Z478 1369 aaKnown RBP10.78□□□□□ -0.68
NEK1-207ENST00000511633 CDK5RAP3Q96JB5 506 aa10.78□□□□□ -0.68
NEK1-207ENST00000511633 SMARCA5O60264 1052 aaPredicted RBP10.78□□□□□ -0.68
NEK1-207ENST00000511633 AMOTQ4VCS5 1084 aa10.78□□□□□ -0.68
NEK1-207ENST00000511633 ZNF396Q96N95 335 aaPredicted RBP10.78□□□□□ -0.68
NEK1-207ENST00000511633 IDH1O75874 414 aaKnown RBP10.78□□□□□ -0.68
NEK1-207ENST00000511633 TDO2P48775 406 aa10.78□□□□□ -0.68
NEK1-207ENST00000511633 FMNL2Q96PY5 1086 aa10.77□□□□□ -0.68
NEK1-207ENST00000511633 C14orf93Q9H972 538 aaKnown RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms