RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 POLR1AO95602 1720 aaPredicted RBP13.67□□□□□ -0.22
RETREG1-206ENST00000510362 UGGT1Q9NYU2 1555 aa13.66□□□□□ -0.22
RETREG1-206ENST00000510362 CFAP65Q6ZU64 1925 aaKnown RBP13.66□□□□□ -0.22
RETREG1-206ENST00000510362 IQGAP3Q86VI3 1631 aa13.65□□□□□ -0.22
RETREG1-206ENST00000510362 RCCD1A6NED2 376 aa13.65□□□□□ -0.22
RETREG1-206ENST00000510362 CLCN1P35523 988 aa13.65□□□□□ -0.22
RETREG1-206ENST00000510362 GIGYF2Q6Y7W6 1299 aaKnown RBP13.65□□□□□ -0.22
RETREG1-206ENST00000510362 GPCPD1Q9NPB8 672 aa13.65□□□□□ -0.22
RETREG1-206ENST00000510362 RPRD2Q5VT52 1461 aaKnown RBP13.65□□□□□ -0.22
RETREG1-206ENST00000510362 PTPRTO14522 1441 aa13.64□□□□□ -0.23
RETREG1-206ENST00000510362 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.64□□□□□ -0.23
RETREG1-206ENST00000510362 LSM11P83369 360 aaKnown RBP eCLIP13.64□□□□□ -0.23
RETREG1-206ENST00000510362 UBR1Q8IWV7 1749 aa13.63□□□□□ -0.23
RETREG1-206ENST00000510362 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
RETREG1-206ENST00000510362 TK2O00142 265 aa13.62□□□□□ -0.23
RETREG1-206ENST00000510362 SEPT9Q9UHD8 586 aaPredicted RBP13.62□□□□□ -0.23
RETREG1-206ENST00000510362 DNAJB2P25686 324 aa13.61□□□□□ -0.23
RETREG1-206ENST00000510362 THEMISQ8N1K5 641 aaPredicted RBP13.61□□□□□ -0.23
RETREG1-206ENST00000510362 HFM1A2PYH4 1435 aa13.6□□□□□ -0.23
RETREG1-206ENST00000510362 SYNMO15061 1565 aa13.6□□□□□ -0.23
RETREG1-206ENST00000510362 TMEM132AQ24JP5 1023 aa13.6□□□□□ -0.23
RETREG1-206ENST00000510362 PIK3C2BO00750 1634 aa13.6□□□□□ -0.23
RETREG1-206ENST00000510362 E9PCH4 1651 aa13.59□□□□□ -0.23
RETREG1-206ENST00000510362 NOS1P29475 1434 aa13.59□□□□□ -0.23
RETREG1-206ENST00000510362 NAIPQ13075 1403 aa13.59□□□□□ -0.23
RETREG1-206ENST00000510362 MS4A1P11836 297 aa13.59□□□□□ -0.23
RETREG1-206ENST00000510362 ADGRD1Q6QNK2 874 aa13.59□□□□□ -0.23
RETREG1-206ENST00000510362 BHMG1C9JSJ3 638 aaPredicted RBP13.58□□□□□ -0.24
RETREG1-206ENST00000510362 FAM117AQ9C073 453 aa13.58□□□□□ -0.24
RETREG1-206ENST00000510362 TMEM134Q9H6X4 195 aa13.58□□□□□ -0.24
RETREG1-206ENST00000510362 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.24
RETREG1-206ENST00000510362 NUP155O75694 1391 aa13.58□□□□□ -0.24
RETREG1-206ENST00000510362 FAM217BQ9NTX9 383 aaPredicted RBP13.57□□□□□ -0.24
RETREG1-206ENST00000510362 IL27Q8NEV9 243 aa13.56□□□□□ -0.24
RETREG1-206ENST00000510362 NBPF3Q9H094 633 aa13.56□□□□□ -0.24
RETREG1-206ENST00000510362 DAXXQ9UER7 740 aaPredicted RBP13.56□□□□□ -0.24
RETREG1-206ENST00000510362 ADGRB3O60242 1522 aa13.55□□□□□ -0.24
RETREG1-206ENST00000510362 SLIT1O75093 1534 aa13.55□□□□□ -0.24
RETREG1-206ENST00000510362 SSTR3P32745 418 aaPredicted RBP13.55□□□□□ -0.24
RETREG1-206ENST00000510362 FAM98CQ17RN3 349 aaKnown RBP13.55□□□□□ -0.24
RETREG1-206ENST00000510362 POTEGQ6S5H5 508 aa13.55□□□□□ -0.24
RETREG1-206ENST00000510362 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
RETREG1-206ENST00000510362 ANKLE2Q86XL3 938 aa13.55□□□□□ -0.24
RETREG1-206ENST00000510362 KRTAP3-3Q9BYR6 98 aa13.55□□□□□ -0.24
RETREG1-206ENST00000510362 KRTAP3-2Q9BYR7 98 aa13.55□□□□□ -0.24
RETREG1-206ENST00000510362 IQGAP1P46940 1657 aa13.55□□□□□ -0.24
RETREG1-206ENST00000510362 MED14O60244 1454 aa13.55□□□□□ -0.24
RETREG1-206ENST00000510362 SPHKAPQ2M3C7 1700 aa13.54□□□□□ -0.24
RETREG1-206ENST00000510362 SLC52A1Q9NWF4 448 aa13.54□□□□□ -0.24
RETREG1-206ENST00000510362 ARHGAP23Q9P227 1491 aa13.54□□□□□ -0.24
RETREG1-206ENST00000510362 POTEMA6NI47 508 aa13.53□□□□□ -0.24
RETREG1-206ENST00000510362 HRO43593 1189 aa13.53□□□□□ -0.24
RETREG1-206ENST00000510362 LAPTM4BQ86VI4 370 aa13.53□□□□□ -0.24
RETREG1-206ENST00000510362 DDRGK1Q96HY6 314 aa13.53□□□□□ -0.24
RETREG1-206ENST00000510362 PLEKHG3A1L390 1219 aa13.52□□□□□ -0.25
RETREG1-206ENST00000510362 NPHP4O75161 1426 aaPredicted RBP13.52□□□□□ -0.25
RETREG1-206ENST00000510362 SCAF11Q99590 1463 aaKnown RBP13.52□□□□□ -0.25
RETREG1-206ENST00000510362 LTBP4Q8N2S1 1624 aa13.51□□□□□ -0.25
RETREG1-206ENST00000510362 IDI1Q13907 227 aa13.51□□□□□ -0.25
RETREG1-206ENST00000510362 IQSEC2Q5JU85 1478 aa13.5□□□□□ -0.25
RETREG1-206ENST00000510362 SWT1Q5T5J6 900 aaKnown RBP13.5□□□□□ -0.25
RETREG1-206ENST00000510362 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
RETREG1-206ENST00000510362 MYO5BQ9ULV0 1848 aa13.5□□□□□ -0.25
RETREG1-206ENST00000510362 TMEM131LA2VDJ0 1609 aa13.5□□□□□ -0.25
RETREG1-206ENST00000510362 TMEM2Q9UHN6 1383 aa13.49□□□□□ -0.25
RETREG1-206ENST00000510362 EID1Q9Y6B2 187 aa13.49□□□□□ -0.25
RETREG1-206ENST00000510362 ACIN1Q9UKV3 1341 aaKnown RBP13.48□□□□□ -0.25
RETREG1-206ENST00000510362 DDX11L8A8MPP1 907 aa13.47□□□□□ -0.25
RETREG1-206ENST00000510362 SULF1Q8IWU6 871 aa13.47□□□□□ -0.25
RETREG1-206ENST00000510362 FBXO41Q8TF61 875 aa13.47□□□□□ -0.25
RETREG1-206ENST00000510362 ZFRQ96KR1 1074 aaKnown RBP13.47□□□□□ -0.25
RETREG1-206ENST00000510362 BEGAINQ9BUH8 593 aa13.47□□□□□ -0.25
RETREG1-206ENST00000510362 TRPM2O94759 1503 aa13.47□□□□□ -0.25
RETREG1-206ENST00000510362 CPS1P31327 1500 aa13.46□□□□□ -0.25
RETREG1-206ENST00000510362 SAMD7Q7Z3H4 446 aa13.46□□□□□ -0.25
RETREG1-206ENST00000510362 CDAN1Q8IWY9 1227 aa13.46□□□□□ -0.25
RETREG1-206ENST00000510362 TRIM52Q96A61 297 aa13.46□□□□□ -0.25
RETREG1-206ENST00000510362 ZNF335Q9H4Z2 1342 aaPredicted RBP13.45□□□□□ -0.26
RETREG1-206ENST00000510362 CD46P15529 392 aa13.45□□□□□ -0.26
RETREG1-206ENST00000510362 TXNDC2Q86VQ3 553 aa13.45□□□□□ -0.26
RETREG1-206ENST00000510362 HDGFP51858 240 aaKnown RBP13.44□□□□□ -0.26
RETREG1-206ENST00000510362 KIF1BO60333 1816 aa13.43□□□□□ -0.26
RETREG1-206ENST00000510362 CLTCL1P53675 1640 aa13.43□□□□□ -0.26
RETREG1-206ENST00000510362 ZFYVE9O95405 1425 aa13.43□□□□□ -0.26
RETREG1-206ENST00000510362 LTKP29376 864 aa13.43□□□□□ -0.26
RETREG1-206ENST00000510362 STAC3Q96MF2 364 aa13.43□□□□□ -0.26
RETREG1-206ENST00000510362 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
RETREG1-206ENST00000510362 RIMS2Q9UQ26 1411 aa13.41□□□□□ -0.26
RETREG1-206ENST00000510362 RDH13Q8NBN7 331 aa13.41□□□□□ -0.26
RETREG1-206ENST00000510362 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.4□□□□□ -0.26
RETREG1-206ENST00000510362 STRCP1A6NGW2 1772 aa13.4□□□□□ -0.26
RETREG1-206ENST00000510362 SLC10A3P09131 477 aa13.39□□□□□ -0.27
RETREG1-206ENST00000510362 SLF2Q8IX21 1173 aa13.39□□□□□ -0.27
RETREG1-206ENST00000510362 PLEKHG1Q9ULL1 1385 aa13.39□□□□□ -0.27
RETREG1-206ENST00000510362 DIP2AQ14689 1571 aa13.38□□□□□ -0.27
RETREG1-206ENST00000510362 GOLGA8CPA6NN73 597 aa13.38□□□□□ -0.27
RETREG1-206ENST00000510362 PPP1R15AO75807 674 aaPredicted RBP13.38□□□□□ -0.27
RETREG1-206ENST00000510362 RAB3GAP2Q9H2M9 1393 aa13.37□□□□□ -0.27
RETREG1-206ENST00000510362 RNF40O75150 1001 aa13.37□□□□□ -0.27
RETREG1-206ENST00000510362 SLC4A3P48751 1232 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms