RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 HDGFL1Q5TGJ6 251 aa6.39□□□□□ -1.39
PHF3-210ENST00000509876 CERKQ8TCT0 537 aa6.39□□□□□ -1.39
PHF3-210ENST00000509876 ZMYM4Q5VZL5 1548 aa6.39□□□□□ -1.39
PHF3-210ENST00000509876 ABCA6Q8N139 1617 aa6.39□□□□□ -1.39
PHF3-210ENST00000509876 CFAP65Q6ZU64 1925 aaKnown RBP6.39□□□□□ -1.39
PHF3-210ENST00000509876 PTPRTO14522 1441 aa6.39□□□□□ -1.39
PHF3-210ENST00000509876 FAM177BA6PVY3 158 aa6.39□□□□□ -1.39
PHF3-210ENST00000509876 GCP02774 474 aa6.39□□□□□ -1.39
PHF3-210ENST00000509876 UNC13BO14795 1591 aa6.39□□□□□ -1.39
PHF3-210ENST00000509876 ZBED9Q6R2W3 1325 aa6.38□□□□□ -1.39
PHF3-210ENST00000509876 G3BP1Q13283 466 aaKnown RBP eCLIP6.38□□□□□ -1.39
PHF3-210ENST00000509876 NAP1L2Q9ULW6 460 aaPredicted RBP6.38□□□□□ -1.39
PHF3-210ENST00000509876 FLT4P35916 1363 aa6.38□□□□□ -1.39
PHF3-210ENST00000509876 HSP90AB4PQ58FF6 505 aa6.38□□□□□ -1.39
PHF3-210ENST00000509876 WWC1Q8IX03 1113 aa6.38□□□□□ -1.39
PHF3-210ENST00000509876 TWISTNBQ3B726 338 aaPredicted RBP6.38□□□□□ -1.39
PHF3-210ENST00000509876 DDX19BQ9UMR2 479 aa6.38□□□□□ -1.39
PHF3-210ENST00000509876 EDC4Q6P2E9 1401 aaKnown RBP6.38□□□□□ -1.39
PHF3-210ENST00000509876 BCL2L13Q9BXK5 485 aa6.38□□□□□ -1.39
PHF3-210ENST00000509876 ZFYVE9O95405 1425 aa6.38□□□□□ -1.39
PHF3-210ENST00000509876 SYNMO15061 1565 aa6.37□□□□□ -1.39
PHF3-210ENST00000509876 PCDH11XQ9BZA7 1347 aa6.37□□□□□ -1.39
PHF3-210ENST00000509876 PCDH11YQ9BZA8 1340 aa6.37□□□□□ -1.39
PHF3-210ENST00000509876 MYL6BP14649 208 aa6.37□□□□□ -1.39
PHF3-210ENST00000509876 TAF7Q15545 349 aaPredicted RBP6.37□□□□□ -1.39
PHF3-210ENST00000509876 WDR63Q8IWG1 891 aa6.37□□□□□ -1.39
PHF3-210ENST00000509876 FMNL2Q96PY5 1086 aa6.37□□□□□ -1.39
PHF3-210ENST00000509876 ASXL1Q8IXJ9 1541 aa6.37□□□□□ -1.39
PHF3-210ENST00000509876 LMTK2Q8IWU2 1503 aa6.37□□□□□ -1.39
PHF3-210ENST00000509876 METP08581 1390 aa6.37□□□□□ -1.39
PHF3-210ENST00000509876 TRIM6-TRIM34B2RNG4 842 aa6.37□□□□□ -1.39
PHF3-210ENST00000509876 UBTFL1P0CB47 393 aaPredicted RBP6.37□□□□□ -1.39
PHF3-210ENST00000509876 CEP152O94986 1710 aa6.37□□□□□ -1.39
PHF3-210ENST00000509876 DZIP1LQ8IYY4 767 aaKnown RBP6.37□□□□□ -1.39
PHF3-210ENST00000509876 TRPC5Q9UL62 973 aaPredicted RBP6.37□□□□□ -1.39
PHF3-210ENST00000509876 TCERG1O14776 1098 aaKnown RBP6.36□□□□□ -1.39
PHF3-210ENST00000509876 HSP90AB3PQ58FF7 597 aa6.36□□□□□ -1.39
PHF3-210ENST00000509876 BICDL1Q6ZP65 573 aa6.36□□□□□ -1.39
PHF3-210ENST00000509876 IP6K1Q92551 441 aa6.36□□□□□ -1.39
PHF3-210ENST00000509876 PTCD1O75127 700 aaKnown RBP6.36□□□□□ -1.39
PHF3-210ENST00000509876 FAM135BQ49AJ0 1406 aa6.36□□□□□ -1.39
PHF3-210ENST00000509876 A0A1W2PP64 1363 aa6.36□□□□□ -1.39
PHF3-210ENST00000509876 FYB1O15117 783 aa6.36□□□□□ -1.39
PHF3-210ENST00000509876 IFIT2P09913 472 aaKnown RBP6.36□□□□□ -1.39
PHF3-210ENST00000509876 POLD1P28340 1107 aa6.36□□□□□ -1.39
PHF3-210ENST00000509876 CT47B1P0C2W7 299 aaPredicted RBP6.36□□□□□ -1.39
PHF3-210ENST00000509876 B4GALNT3Q6L9W6 998 aa6.36□□□□□ -1.39
PHF3-210ENST00000509876 GNAI3P08754 354 aa6.35□□□□□ -1.39
PHF3-210ENST00000509876 PLEKHG3A1L390 1219 aa6.35□□□□□ -1.39
PHF3-210ENST00000509876 RXRBP28702 533 aa6.35□□□□□ -1.39
PHF3-210ENST00000509876 RFC4P35249 363 aa6.35□□□□□ -1.39
PHF3-210ENST00000509876 ACSBG1Q96GR2 724 aa6.35□□□□□ -1.39
PHF3-210ENST00000509876 FER1L4A9Z1Z3 1794 aa6.35□□□□□ -1.39
PHF3-210ENST00000509876 SPHKAPQ2M3C7 1700 aa6.35□□□□□ -1.39
PHF3-210ENST00000509876 ERICH6BQ5W0A0 696 aa6.35□□□□□ -1.39
PHF3-210ENST00000509876 IFT57Q9NWB7 429 aa6.35□□□□□ -1.39
PHF3-210ENST00000509876 NCLP19338 710 aaKnown RBP6.35□□□□□ -1.39
PHF3-210ENST00000509876 HOXC9P31274 260 aa6.35□□□□□ -1.39
PHF3-210ENST00000509876 GNL3LQ9NVN8 582 aaKnown RBP6.35□□□□□ -1.39
PHF3-210ENST00000509876 STK32BQ9NY57 414 aa6.35□□□□□ -1.39
PHF3-210ENST00000509876 RNF17Q9BXT8 1623 aaKnown RBP6.35□□□□□ -1.39
PHF3-210ENST00000509876 DDX17Q92841 729 aaKnown RBP6.35□□□□□ -1.39
PHF3-210ENST00000509876 SLC4A2P04920 1241 aa6.34□□□□□ -1.39
PHF3-210ENST00000509876 TMPOP42166 694 aaKnown RBP6.34□□□□□ -1.39
PHF3-210ENST00000509876 BAG6P46379 1132 aa6.34□□□□□ -1.39
PHF3-210ENST00000509876 AKAP4Q5JQC9 854 aa6.34□□□□□ -1.39
PHF3-210ENST00000509876 PLEKHH1Q9ULM0 1364 aa6.34□□□□□ -1.39
PHF3-210ENST00000509876 SBNO1A3KN83 1393 aa6.34□□□□□ -1.39
PHF3-210ENST00000509876 ATP6V1AP38606 617 aa6.34□□□□□ -1.39
PHF3-210ENST00000509876 CCT4P50991 539 aaKnown RBP6.34□□□□□ -1.39
PHF3-210ENST00000509876 MCM10Q7L590 875 aa6.34□□□□□ -1.39
PHF3-210ENST00000509876 CNNM1Q9NRU3 951 aa6.34□□□□□ -1.39
PHF3-210ENST00000509876 PHF14O94880 888 aa6.34□□□□□ -1.39
PHF3-210ENST00000509876 EXOSC9Q06265 439 aaKnown RBP6.34□□□□□ -1.39
PHF3-210ENST00000509876 FAM98CQ17RN3 349 aaKnown RBP6.34□□□□□ -1.39
PHF3-210ENST00000509876 QTRT2Q9H974 415 aaKnown RBP6.34□□□□□ -1.39
PHF3-210ENST00000509876 ANKARQ7Z5J8 1434 aa6.34□□□□□ -1.39
PHF3-210ENST00000509876 ST5P78524 1137 aa6.34□□□□□ -1.4
PHF3-210ENST00000509876 CEP170BQ9Y4F5 1589 aaPredicted RBP6.34□□□□□ -1.4
PHF3-210ENST00000509876 HTATSF1O43719 755 aaKnown RBP6.33□□□□□ -1.4
PHF3-210ENST00000509876 HSP90AB2PQ58FF8 381 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 ROBO2Q9HCK4 1378 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 AAMPQ13685 434 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 SRCIN1Q9C0H9 1055 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.33□□□□□ -1.4
PHF3-210ENST00000509876 CTDP1Q9Y5B0 961 aaPredicted RBP6.33□□□□□ -1.4
PHF3-210ENST00000509876 SPATA31E1Q6ZUB1 1445 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 RPGRQ92834 1020 aaKnown RBP6.33□□□□□ -1.4
PHF3-210ENST00000509876 KIDINS220Q9ULH0 1771 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 PLIN1O60240 522 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 IGHMBP2P38935 993 aaKnown RBP6.33□□□□□ -1.4
PHF3-210ENST00000509876 ZNF428Q96B54 188 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 MPHOSPH8Q99549 860 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 TOMM22Q9NS69 142 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 TAOK2Q9UL54 1235 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 KDM5AP29375 1690 aaKnown RBP6.33□□□□□ -1.4
PHF3-210ENST00000509876 MADDQ8WXG6 1647 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 ERC1Q8IUD2 1116 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 CLTCL1P53675 1640 aa6.33□□□□□ -1.4
PHF3-210ENST00000509876 ADGRL3Q9HAR2 1447 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms