RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 USP54Q70EL1 1684 aa10.15□□□□□ -0.79
SSBP2-213ENST00000509743 DCCP43146 1447 aa10.15□□□□□ -0.79
SSBP2-213ENST00000509743 AMPHP49418 695 aa10.14□□□□□ -0.79
SSBP2-213ENST00000509743 GNAI1P63096 354 aa10.14□□□□□ -0.79
SSBP2-213ENST00000509743 SETD1BQ9UPS6 1966 aaKnown RBP10.14□□□□□ -0.79
SSBP2-213ENST00000509743 PIK3C2AO00443 1686 aa10.13□□□□□ -0.79
SSBP2-213ENST00000509743 EXOSC9Q06265 439 aaKnown RBP10.13□□□□□ -0.79
SSBP2-213ENST00000509743 ESCO1Q5FWF5 840 aa10.13□□□□□ -0.79
SSBP2-213ENST00000509743 ABTB2Q8N961 1025 aa10.13□□□□□ -0.79
SSBP2-213ENST00000509743 PHACTR3Q96KR7 559 aa10.13□□□□□ -0.79
SSBP2-213ENST00000509743 C19orf44Q9H6X5 657 aa10.13□□□□□ -0.79
SSBP2-213ENST00000509743 IFT57Q9NWB7 429 aa10.13□□□□□ -0.79
SSBP2-213ENST00000509743 PAK3O75914 559 aaPredicted RBP10.12□□□□□ -0.79
SSBP2-213ENST00000509743 HSP90AB2PQ58FF8 381 aa10.12□□□□□ -0.79
SSBP2-213ENST00000509743 SULT6B1Q6IMI4 303 aa10.12□□□□□ -0.79
SSBP2-213ENST00000509743 KCNH5Q8NCM2 988 aa10.12□□□□□ -0.79
SSBP2-213ENST00000509743 TSR2Q969E8 191 aaKnown RBP10.12□□□□□ -0.79
SSBP2-213ENST00000509743 KDRP35968 1356 aa10.12□□□□□ -0.79
SSBP2-213ENST00000509743 IGSF1Q8N6C5 1336 aa10.11□□□□□ -0.79
SSBP2-213ENST00000509743 KIF16BQ96L93 1317 aa10.11□□□□□ -0.79
SSBP2-213ENST00000509743 PEAK1Q9H792 1746 aa10.11□□□□□ -0.79
SSBP2-213ENST00000509743 PSME1Q06323 249 aa10.11□□□□□ -0.79
SSBP2-213ENST00000509743 ALDH1L2Q3SY69 923 aa10.11□□□□□ -0.79
SSBP2-213ENST00000509743 CENPQQ7L2Z9 268 aaPredicted RBP10.11□□□□□ -0.79
SSBP2-213ENST00000509743 C1orf167Q5SNV9 1468 aa10.1□□□□□ -0.79
SSBP2-213ENST00000509743 MST1RQ04912 1400 aa10.1□□□□□ -0.79
SSBP2-213ENST00000509743 SOX12O15370 315 aa10.1□□□□□ -0.79
SSBP2-213ENST00000509743 ZNF853P0CG23 659 aa10.1□□□□□ -0.79
SSBP2-213ENST00000509743 HOXC9P31274 260 aa10.1□□□□□ -0.79
SSBP2-213ENST00000509743 HAP1P54257 671 aaPredicted RBP10.1□□□□□ -0.79
SSBP2-213ENST00000509743 ZKSCAN2Q63HK3 967 aa10.1□□□□□ -0.79
SSBP2-213ENST00000509743 AEBP1Q8IUX7 1158 aa10.1□□□□□ -0.79
SSBP2-213ENST00000509743 FRAT1Q92837 279 aaPredicted RBP10.1□□□□□ -0.79
SSBP2-213ENST00000509743 CFAP44Q96MT7 982 aa10.1□□□□□ -0.79
SSBP2-213ENST00000509743 SMC4Q9NTJ3 1288 aa10.1□□□□□ -0.79
SSBP2-213ENST00000509743 TMEM94Q12767 1356 aa10.1□□□□□ -0.79
SSBP2-213ENST00000509743 TCERG1O14776 1098 aaKnown RBP10.09□□□□□ -0.79
SSBP2-213ENST00000509743 ATF3P18847 181 aa10.09□□□□□ -0.79
SSBP2-213ENST00000509743 BRPF1P55201 1214 aaPredicted RBP10.09□□□□□ -0.79
SSBP2-213ENST00000509743 RBM33Q96EV2 1170 aaKnown RBP10.09□□□□□ -0.79
SSBP2-213ENST00000509743 RGPD1P0DJD0 1748 aa10.09□□□□□ -0.79
SSBP2-213ENST00000509743 KIF1AQ12756 1690 aa10.09□□□□□ -0.79
SSBP2-213ENST00000509743 KDM2BQ8NHM5 1336 aa10.08□□□□□ -0.8
SSBP2-213ENST00000509743 NFAT5O94916 1531 aa10.08□□□□□ -0.8
SSBP2-213ENST00000509743 IPO8O15397 1037 aaKnown RBP10.08□□□□□ -0.8
SSBP2-213ENST00000509743 HTATSF1O43719 755 aaKnown RBP10.08□□□□□ -0.8
SSBP2-213ENST00000509743 NUTM2GQ5VZR2 741 aa10.08□□□□□ -0.8
SSBP2-213ENST00000509743 GAS2L2Q8NHY3 880 aa10.08□□□□□ -0.8
SSBP2-213ENST00000509743 CLUAP1Q96AJ1 413 aa10.08□□□□□ -0.8
SSBP2-213ENST00000509743 RBM19Q9Y4C8 960 aaKnown RBP10.08□□□□□ -0.8
SSBP2-213ENST00000509743 USP19O94966 1318 aa10.07□□□□□ -0.8
SSBP2-213ENST00000509743 SLIT3O75094 1523 aa10.07□□□□□ -0.8
SSBP2-213ENST00000509743 CADPS2Q86UW7 1296 aa10.07□□□□□ -0.8
SSBP2-213ENST00000509743 FTSJ3Q8IY81 847 aaKnown RBP10.07□□□□□ -0.8
SSBP2-213ENST00000509743 DZIP1LQ8IYY4 767 aaKnown RBP10.07□□□□□ -0.8
SSBP2-213ENST00000509743 PANK1Q8TE04 598 aa10.07□□□□□ -0.8
SSBP2-213ENST00000509743 SSH1Q8WYL5 1049 aa10.07□□□□□ -0.8
SSBP2-213ENST00000509743 IP6K1Q92551 441 aa10.07□□□□□ -0.8
SSBP2-213ENST00000509743 ORAI2Q96SN7 254 aa10.07□□□□□ -0.8
SSBP2-213ENST00000509743 EYA1Q99502 592 aa10.07□□□□□ -0.8
SSBP2-213ENST00000509743 MSH6P52701 1360 aa10.06□□□□□ -0.8
SSBP2-213ENST00000509743 MAP2P11137 1827 aaKnown RBP10.06□□□□□ -0.8
SSBP2-213ENST00000509743 FOXO3O43524 673 aa10.06□□□□□ -0.8
SSBP2-213ENST00000509743 ATF7IPQ6VMQ6 1270 aa10.06□□□□□ -0.8
SSBP2-213ENST00000509743 KRT28Q7Z3Y7 464 aa10.06□□□□□ -0.8
SSBP2-213ENST00000509743 THUMPD2Q9BTF0 503 aaKnown RBP10.06□□□□□ -0.8
SSBP2-213ENST00000509743 BCL2L13Q9BXK5 485 aa10.06□□□□□ -0.8
SSBP2-213ENST00000509743 MBIPQ9NS73 344 aa10.06□□□□□ -0.8
SSBP2-213ENST00000509743 LAS1LQ9Y4W2 734 aaKnown RBP10.06□□□□□ -0.8
SSBP2-213ENST00000509743 LMTK3Q96Q04 1460 aa10.05□□□□□ -0.8
SSBP2-213ENST00000509743 KIAA0232Q92628 1395 aa10.05□□□□□ -0.8
SSBP2-213ENST00000509743 HSPA2P54652 639 aa10.05□□□□□ -0.8
SSBP2-213ENST00000509743 MVPQ14764 893 aaKnown RBP10.05□□□□□ -0.8
SSBP2-213ENST00000509743 RTF1Q92541 710 aaKnown RBP10.05□□□□□ -0.8
SSBP2-213ENST00000509743 ARHGAP45Q92619 1136 aa10.05□□□□□ -0.8
SSBP2-213ENST00000509743 COG6Q9Y2V7 657 aa10.05□□□□□ -0.8
SSBP2-213ENST00000509743 NPHP3Q7Z494 1330 aa10.05□□□□□ -0.8
SSBP2-213ENST00000509743 CHL1O00533 1208 aa10.04□□□□□ -0.8
SSBP2-213ENST00000509743 TRIM27P14373 513 aa10.04□□□□□ -0.8
SSBP2-213ENST00000509743 TWISTNBQ3B726 338 aaPredicted RBP10.04□□□□□ -0.8
SSBP2-213ENST00000509743 CHMP4BQ9H444 224 aaKnown RBP10.04□□□□□ -0.8
SSBP2-213ENST00000509743 DDX19BQ9UMR2 479 aa10.04□□□□□ -0.8
SSBP2-213ENST00000509743 MARF1Q9Y4F3 1742 aaKnown RBP10.04□□□□□ -0.8
SSBP2-213ENST00000509743 PHRF1Q9P1Y6 1649 aaKnown RBP10.04□□□□□ -0.8
SSBP2-213ENST00000509743 RGPD8O14715 1765 aaPredicted RBP10.03□□□□□ -0.8
SSBP2-213ENST00000509743 KDM4FA0A1W2PPD8 638 aa10.03□□□□□ -0.8
SSBP2-213ENST00000509743 FAM83GA6ND36 823 aa10.03□□□□□ -0.8
SSBP2-213ENST00000509743 VAMP4O75379 141 aa10.03□□□□□ -0.8
SSBP2-213ENST00000509743 GCP02774 474 aa10.03□□□□□ -0.8
SSBP2-213ENST00000509743 RLBP1P12271 317 aa10.03□□□□□ -0.8
SSBP2-213ENST00000509743 CRB1P82279 1406 aa10.03□□□□□ -0.8
SSBP2-213ENST00000509743 MTHFSDQ2M296 383 aaKnown RBP10.03□□□□□ -0.8
SSBP2-213ENST00000509743 ARHGEF25Q86VW2 580 aa10.03□□□□□ -0.8
SSBP2-213ENST00000509743 GNAT3A8MTJ3 354 aa10.02□□□□□ -0.81
SSBP2-213ENST00000509743 BABAM1Q9NWV8 329 aa10.02□□□□□ -0.81
SSBP2-213ENST00000509743 NOB1Q9ULX3 412 aaKnown RBP10.02□□□□□ -0.81
SSBP2-213ENST00000509743 MAP3K5Q99683 1374 aa10.01□□□□□ -0.81
SSBP2-213ENST00000509743 NCAPD2Q15021 1401 aa10.01□□□□□ -0.81
SSBP2-213ENST00000509743 XPCQ01831 940 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-213ENST00000509743 DCTN1Q14203 1278 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms