RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 ZNF853P0CG23 659 aa11.67□□□□□ -0.54
LINC02239-201ENST00000504339 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
LINC02239-201ENST00000504339 RGPD8O14715 1765 aaPredicted RBP11.66□□□□□ -0.54
LINC02239-201ENST00000504339 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
LINC02239-201ENST00000504339 ADAMTSL3P82987 1691 aa11.66□□□□□ -0.54
LINC02239-201ENST00000504339 RBM33Q96EV2 1170 aaKnown RBP11.66□□□□□ -0.54
LINC02239-201ENST00000504339 FAM83GA6ND36 823 aa11.65□□□□□ -0.54
LINC02239-201ENST00000504339 TRIM27P14373 513 aa11.65□□□□□ -0.54
LINC02239-201ENST00000504339 MAP3K19Q56UN5 1328 aa11.65□□□□□ -0.54
LINC02239-201ENST00000504339 TSPYL6Q8N831 410 aa11.65□□□□□ -0.55
LINC02239-201ENST00000504339 SMC4Q9NTJ3 1288 aa11.65□□□□□ -0.55
LINC02239-201ENST00000504339 TTC21AQ8NDW8 1320 aa11.64□□□□□ -0.55
LINC02239-201ENST00000504339 SOX12O15370 315 aa11.64□□□□□ -0.55
LINC02239-201ENST00000504339 ZKSCAN2Q63HK3 967 aa11.64□□□□□ -0.55
LINC02239-201ENST00000504339 SULT6B1Q6IMI4 303 aa11.64□□□□□ -0.55
LINC02239-201ENST00000504339 ANKLE2Q86XL3 938 aa11.64□□□□□ -0.55
LINC02239-201ENST00000504339 NGDNQ8NEJ9 315 aaKnown RBP11.64□□□□□ -0.55
LINC02239-201ENST00000504339 DCTN1Q14203 1278 aa11.63□□□□□ -0.55
LINC02239-201ENST00000504339 MVPQ14764 893 aaKnown RBP11.63□□□□□ -0.55
LINC02239-201ENST00000504339 NOB1Q9ULX3 412 aaKnown RBP11.63□□□□□ -0.55
LINC02239-201ENST00000504339 ANKARQ7Z5J8 1434 aa11.63□□□□□ -0.55
LINC02239-201ENST00000504339 DZIP1LQ8IYY4 767 aaKnown RBP11.63□□□□□ -0.55
LINC02239-201ENST00000504339 MBIPQ9NS73 344 aa11.63□□□□□ -0.55
LINC02239-201ENST00000504339 PIK3C2AO00443 1686 aa11.62□□□□□ -0.55
LINC02239-201ENST00000504339 VAMP4O75379 141 aa11.62□□□□□ -0.55
LINC02239-201ENST00000504339 RGPD1P0DJD0 1748 aa11.62□□□□□ -0.55
LINC02239-201ENST00000504339 LAS1LQ9Y4W2 734 aaKnown RBP11.62□□□□□ -0.55
LINC02239-201ENST00000504339 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
LINC02239-201ENST00000504339 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
LINC02239-201ENST00000504339 ADRA2BP18089 450 aa11.62□□□□□ -0.55
LINC02239-201ENST00000504339 C8orf34Q49A92 452 aa11.62□□□□□ -0.55
LINC02239-201ENST00000504339 ATF7IPQ6VMQ6 1270 aa11.62□□□□□ -0.55
LINC02239-201ENST00000504339 IFT57Q9NWB7 429 aa11.62□□□□□ -0.55
LINC02239-201ENST00000504339 FMN2Q9NZ56 1722 aa11.61□□□□□ -0.55
LINC02239-201ENST00000504339 NEFMP07197 916 aa11.61□□□□□ -0.55
LINC02239-201ENST00000504339 RGS3P49796 1198 aa11.61□□□□□ -0.55
LINC02239-201ENST00000504339 CHD2O14647 1828 aaKnown RBP11.61□□□□□ -0.55
LINC02239-201ENST00000504339 BRPF1P55201 1214 aaPredicted RBP11.6□□□□□ -0.55
LINC02239-201ENST00000504339 AAMPQ13685 434 aa11.6□□□□□ -0.55
LINC02239-201ENST00000504339 ALDH1L2Q3SY69 923 aa11.6□□□□□ -0.55
LINC02239-201ENST00000504339 C8orf58Q8NAV2 365 aa11.6□□□□□ -0.55
LINC02239-201ENST00000504339 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
LINC02239-201ENST00000504339 DLG5Q8TDM6 1919 aa11.6□□□□□ -0.55
LINC02239-201ENST00000504339 MARF1Q9Y4F3 1742 aaKnown RBP11.6□□□□□ -0.55
LINC02239-201ENST00000504339 NUTM2GQ5VZR2 741 aa11.6□□□□□ -0.55
LINC02239-201ENST00000504339 TMEM57Q8N5G2 664 aa11.6□□□□□ -0.55
LINC02239-201ENST00000504339 ELL2O00472 640 aaPredicted RBP11.59□□□□□ -0.55
LINC02239-201ENST00000504339 NLRP6P59044 892 aa11.59□□□□□ -0.55
LINC02239-201ENST00000504339 GNAI1P63096 354 aa11.59□□□□□ -0.55
LINC02239-201ENST00000504339 IPO9Q96P70 1041 aaKnown RBP11.59□□□□□ -0.55
LINC02239-201ENST00000504339 SBNO1A3KN83 1393 aa11.59□□□□□ -0.55
LINC02239-201ENST00000504339 FTSJ3Q8IY81 847 aaKnown RBP11.58□□□□□ -0.55
LINC02239-201ENST00000504339 MRPL50Q8N5N7 158 aaKnown RBP11.58□□□□□ -0.55
LINC02239-201ENST00000504339 NOP58Q9Y2X3 529 aaKnown RBP11.58□□□□□ -0.55
LINC02239-201ENST00000504339 FLT4P35916 1363 aa11.58□□□□□ -0.56
LINC02239-201ENST00000504339 FOXO3O43524 673 aa11.58□□□□□ -0.56
LINC02239-201ENST00000504339 MCM10Q7L590 875 aa11.58□□□□□ -0.56
LINC02239-201ENST00000504339 EYA1Q99502 592 aa11.58□□□□□ -0.56
LINC02239-201ENST00000504339 KDRP35968 1356 aa11.58□□□□□ -0.56
LINC02239-201ENST00000504339 ARHGEF10O15013 1369 aa11.57□□□□□ -0.56
LINC02239-201ENST00000504339 CALD1Q05682 793 aaKnown RBP11.57□□□□□ -0.56
LINC02239-201ENST00000504339 KRT24Q2M2I5 525 aa11.57□□□□□ -0.56
LINC02239-201ENST00000504339 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
LINC02239-201ENST00000504339 ZBTB40Q9NUA8 1239 aa11.57□□□□□ -0.56
LINC02239-201ENST00000504339 PHF8Q9UPP1 1060 aa11.57□□□□□ -0.56
LINC02239-201ENST00000504339 SETD1BQ9UPS6 1966 aaKnown RBP11.57□□□□□ -0.56
LINC02239-201ENST00000504339 NPHP4O75161 1426 aaPredicted RBP11.57□□□□□ -0.56
LINC02239-201ENST00000504339 IGSF1Q8N6C5 1336 aa11.57□□□□□ -0.56
LINC02239-201ENST00000504339 ANP32AP39687 249 aaKnown RBP11.57□□□□□ -0.56
LINC02239-201ENST00000504339 LMOD3Q0VAK6 560 aa11.57□□□□□ -0.56
LINC02239-201ENST00000504339 NPM2Q86SE8 214 aaKnown RBP11.57□□□□□ -0.56
LINC02239-201ENST00000504339 ZNF428Q96B54 188 aa11.57□□□□□ -0.56
LINC02239-201ENST00000504339 KIF16BQ96L93 1317 aa11.56□□□□□ -0.56
LINC02239-201ENST00000504339 MTHFSDQ2M296 383 aaKnown RBP11.56□□□□□ -0.56
LINC02239-201ENST00000504339 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
LINC02239-201ENST00000504339 ITPRIPQ8IWB1 547 aa11.56□□□□□ -0.56
LINC02239-201ENST00000504339 CRB1P82279 1406 aa11.56□□□□□ -0.56
LINC02239-201ENST00000504339 ADGRL3Q9HAR2 1447 aa11.56□□□□□ -0.56
LINC02239-201ENST00000504339 CHL1O00533 1208 aa11.56□□□□□ -0.56
LINC02239-201ENST00000504339 HOXC9P31274 260 aa11.56□□□□□ -0.56
LINC02239-201ENST00000504339 TWISTNBQ3B726 338 aaPredicted RBP11.56□□□□□ -0.56
LINC02239-201ENST00000504339 ABTB2Q8N961 1025 aa11.56□□□□□ -0.56
LINC02239-201ENST00000504339 PDZRN3Q9UPQ7 1066 aa11.56□□□□□ -0.56
LINC02239-201ENST00000504339 NWD1Q149M9 1564 aa11.56□□□□□ -0.56
LINC02239-201ENST00000504339 AMPHP49418 695 aa11.55□□□□□ -0.56
LINC02239-201ENST00000504339 DDX19BQ9UMR2 479 aa11.55□□□□□ -0.56
LINC02239-201ENST00000504339 USP54Q70EL1 1684 aa11.54□□□□□ -0.56
LINC02239-201ENST00000504339 IPO8O15397 1037 aaKnown RBP11.54□□□□□ -0.56
LINC02239-201ENST00000504339 HDAC1Q13547 482 aaPredicted RBP11.53□□□□□ -0.56
LINC02239-201ENST00000504339 ARHGAP45Q92619 1136 aa11.53□□□□□ -0.56
LINC02239-201ENST00000504339 RWDD1Q9H446 243 aaPredicted RBP11.53□□□□□ -0.56
LINC02239-201ENST00000504339 ZBTB7BO15156 539 aaPredicted RBP11.53□□□□□ -0.56
LINC02239-201ENST00000504339 ESCO1Q5FWF5 840 aa11.53□□□□□ -0.56
LINC02239-201ENST00000504339 ORAI2Q96SN7 254 aa11.53□□□□□ -0.56
LINC02239-201ENST00000504339 SEC24BO95487 1268 aa11.52□□□□□ -0.56
LINC02239-201ENST00000504339 MIS18AQ9NYP9 233 aa11.52□□□□□ -0.56
LINC02239-201ENST00000504339 ABCC4O15439 1325 aa11.52□□□□□ -0.57
LINC02239-201ENST00000504339 USP19O94966 1318 aa11.52□□□□□ -0.57
LINC02239-201ENST00000504339 KIF24Q5T7B8 1368 aa11.52□□□□□ -0.57
LINC02239-201ENST00000504339 NFAT5O94916 1531 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms