RNA–Protein interactions for RNA: ENST00000504199.5

GC-204, Transcript of GC, vitamin D binding protein, humanhuman

TSL 1 (best) BASIC

Gene GC, Length 1,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GC-204ENST00000504199 PPP6R1Q9UPN7 881 aa13.19□□□□□ -0.3
GC-204ENST00000504199 ZBTB7BO15156 539 aaPredicted RBP13.18□□□□□ -0.3
GC-204ENST00000504199 CLCN1P35523 988 aa13.18□□□□□ -0.3
GC-204ENST00000504199 DDIT3P35638 169 aa13.18□□□□□ -0.3
GC-204ENST00000504199 CDK19Q9BWU1 502 aa13.18□□□□□ -0.3
GC-204ENST00000504199 LNPKQ9C0E8 428 aa13.18□□□□□ -0.3
GC-204ENST00000504199 SENP3Q9H4L4 574 aaPredicted RBP13.18□□□□□ -0.3
GC-204ENST00000504199 SAFB2Q14151 953 aaKnown RBP eCLIP13.17□□□□□ -0.3
GC-204ENST00000504199 RAB3GAP1Q15042 981 aa13.17□□□□□ -0.3
GC-204ENST00000504199 ANKRD45Q5TZF3 282 aa13.17□□□□□ -0.3
GC-204ENST00000504199 SPRYD3Q8NCJ5 442 aa13.17□□□□□ -0.3
GC-204ENST00000504199 LRRC7Q96NW7 1537 aa13.17□□□□□ -0.3
GC-204ENST00000504199 MINK1Q8N4C8 1332 aaPredicted RBP13.17□□□□□ -0.3
GC-204ENST00000504199 PRKAR2BP31323 418 aa13.17□□□□□ -0.3
GC-204ENST00000504199 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
GC-204ENST00000504199 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
GC-204ENST00000504199 GRPEL1Q9HAV7 217 aa13.17□□□□□ -0.3
GC-204ENST00000504199 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.17□□□□□ -0.3
GC-204ENST00000504199 K7ELQ4 463 aaPredicted RBP13.16□□□□□ -0.3
GC-204ENST00000504199 CDC45O75419 566 aa13.16□□□□□ -0.3
GC-204ENST00000504199 NUTM2DQ5VT03 806 aaPredicted RBP13.16□□□□□ -0.3
GC-204ENST00000504199 CASC1Q6TDU7 716 aa13.16□□□□□ -0.3
GC-204ENST00000504199 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
GC-204ENST00000504199 ANP32BQ92688 251 aaKnown RBP13.16□□□□□ -0.3
GC-204ENST00000504199 TRIM44Q96DX7 344 aaPredicted RBP13.16□□□□□ -0.3
GC-204ENST00000504199 AATKQ6ZMQ8 1374 aa13.15□□□□□ -0.3
GC-204ENST00000504199 ALKQ9UM73 1620 aa13.15□□□□□ -0.3
GC-204ENST00000504199 ABCC4O15439 1325 aa13.15□□□□□ -0.3
GC-204ENST00000504199 VAMP4O75379 141 aa13.15□□□□□ -0.3
GC-204ENST00000504199 CABP1Q9NZU7 370 aa13.15□□□□□ -0.31
GC-204ENST00000504199 STAG3Q9UJ98 1225 aa13.15□□□□□ -0.31
GC-204ENST00000504199 CDK12Q9NYV4 1490 aaPredicted RBP13.14□□□□□ -0.31
GC-204ENST00000504199 RABEP1Q15276 862 aa13.14□□□□□ -0.31
GC-204ENST00000504199 CLEC17AQ6ZS10 378 aa13.14□□□□□ -0.31
GC-204ENST00000504199 TNPO1Q92973 898 aaKnown RBP13.14□□□□□ -0.31
GC-204ENST00000504199 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
GC-204ENST00000504199 POLKQ9UBT6 870 aa13.14□□□□□ -0.31
GC-204ENST00000504199 EDC4Q6P2E9 1401 aaKnown RBP13.14□□□□□ -0.31
GC-204ENST00000504199 IBTKQ9P2D0 1353 aaPredicted RBP13.13□□□□□ -0.31
GC-204ENST00000504199 NUCB2P80303 420 aa13.13□□□□□ -0.31
GC-204ENST00000504199 ZNF853P0CG23 659 aa13.12□□□□□ -0.31
GC-204ENST00000504199 TWISTNBQ3B726 338 aaPredicted RBP13.12□□□□□ -0.31
GC-204ENST00000504199 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
GC-204ENST00000504199 GLIPR1L2Q4G1C9 344 aa13.11□□□□□ -0.31
GC-204ENST00000504199 INTS3Q68E01 1043 aaKnown RBP13.11□□□□□ -0.31
GC-204ENST00000504199 TBC1D9Q6ZT07 1266 aa13.11□□□□□ -0.31
GC-204ENST00000504199 RPAP2Q8IXW5 612 aaPredicted RBP13.11□□□□□ -0.31
GC-204ENST00000504199 CWC22Q9HCG8 908 aaKnown RBP13.11□□□□□ -0.31
GC-204ENST00000504199 CPSF1Q10570 1443 aaKnown RBP13.1□□□□□ -0.31
GC-204ENST00000504199 PRKCSHP14314 528 aaPredicted RBP13.1□□□□□ -0.31
GC-204ENST00000504199 SPATA31D1Q6ZQQ2 1576 aa13.1□□□□□ -0.31
GC-204ENST00000504199 MYO5BQ9ULV0 1848 aa13.1□□□□□ -0.31
GC-204ENST00000504199 IL13P35225 146 aa13.09□□□□□ -0.31
GC-204ENST00000504199 DCTPP1Q9H773 170 aa13.09□□□□□ -0.31
GC-204ENST00000504199 HDGFP51858 240 aaKnown RBP13.09□□□□□ -0.31
GC-204ENST00000504199 CCDC173Q0VFZ6 552 aa13.09□□□□□ -0.31
GC-204ENST00000504199 SIRT1Q96EB6 747 aa13.09□□□□□ -0.31
GC-204ENST00000504199 COG3Q96JB2 828 aa13.09□□□□□ -0.31
GC-204ENST00000504199 MBIPQ9NS73 344 aa13.09□□□□□ -0.31
GC-204ENST00000504199 ESPNB1AK53 854 aa13.08□□□□□ -0.32
GC-204ENST00000504199 ST18O60284 1047 aa13.08□□□□□ -0.32
GC-204ENST00000504199 KLHL40Q2TBA0 621 aa13.08□□□□□ -0.32
GC-204ENST00000504199 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.08□□□□□ -0.32
GC-204ENST00000504199 UBE2Q2Q8WVN8 375 aa13.08□□□□□ -0.32
GC-204ENST00000504199 MAP2P11137 1827 aaKnown RBP13.08□□□□□ -0.32
GC-204ENST00000504199 PTPRCP08575 1304 aa13.08□□□□□ -0.32
GC-204ENST00000504199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.07□□□□□ -0.32
GC-204ENST00000504199 KIF2CQ99661 725 aa13.07□□□□□ -0.32
GC-204ENST00000504199 RIMS2Q9UQ26 1411 aa13.07□□□□□ -0.32
GC-204ENST00000504199 NAP1L5Q96NT1 182 aaPredicted RBP13.07□□□□□ -0.32
GC-204ENST00000504199 ARXQ96QS3 562 aa13.07□□□□□ -0.32
GC-204ENST00000504199 HMMRO75330 724 aa13.06□□□□□ -0.32
GC-204ENST00000504199 REC8O95072 547 aa13.06□□□□□ -0.32
GC-204ENST00000504199 HMOX1P09601 288 aa13.06□□□□□ -0.32
GC-204ENST00000504199 TTC22Q5TAA0 569 aa13.06□□□□□ -0.32
GC-204ENST00000504199 KIAA0232Q92628 1395 aa13.06□□□□□ -0.32
GC-204ENST00000504199 WASLO00401 505 aaPredicted RBP13.05□□□□□ -0.32
GC-204ENST00000504199 ANKRD44Q8N8A2 993 aa13.05□□□□□ -0.32
GC-204ENST00000504199 PHACTR3Q96KR7 559 aa13.05□□□□□ -0.32
GC-204ENST00000504199 PANK2Q9BZ23 570 aa13.05□□□□□ -0.32
GC-204ENST00000504199 PLEKHM2Q8IWE5 1019 aa13.04□□□□□ -0.32
GC-204ENST00000504199 DDX49Q9Y6V7 483 aaKnown RBP13.04□□□□□ -0.32
GC-204ENST00000504199 MCM2P49736 904 aa13.04□□□□□ -0.32
GC-204ENST00000504199 SIRT2Q8IXJ6 389 aa13.04□□□□□ -0.32
GC-204ENST00000504199 CCDC61Q9Y6R9 512 aa13.04□□□□□ -0.32
GC-204ENST00000504199 HS1BP3Q53T59 392 aa13.03□□□□□ -0.32
GC-204ENST00000504199 TSPYL6Q8N831 410 aa13.03□□□□□ -0.32
GC-204ENST00000504199 PPP1R9BQ96SB3 815 aa13.03□□□□□ -0.32
GC-204ENST00000504199 C1orf115Q9H7X2 142 aa13.03□□□□□ -0.32
GC-204ENST00000504199 BAG4O95429 457 aaKnown RBP13.02□□□□□ -0.32
GC-204ENST00000504199 NASPP49321 788 aaPredicted RBP13.02□□□□□ -0.32
GC-204ENST00000504199 FBXO31Q5XUX0 539 aaPredicted RBP13.02□□□□□ -0.32
GC-204ENST00000504199 A2ML1A8K2U0 1454 aa13.02□□□□□ -0.33
GC-204ENST00000504199 MON2Q7Z3U7 1717 aa13.02□□□□□ -0.33
GC-204ENST00000504199 TPM2P07951 284 aa13.02□□□□□ -0.33
GC-204ENST00000504199 ZNF445P59923 1031 aa13.02□□□□□ -0.33
GC-204ENST00000504199 C8orf58Q8NAV2 365 aa13.02□□□□□ -0.33
GC-204ENST00000504199 USP26Q9BXU7 913 aa13.02□□□□□ -0.33
GC-204ENST00000504199 EMILIN1Q9Y6C2 1016 aa13.02□□□□□ -0.33
GC-204ENST00000504199 RRP9O43818 475 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms