RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 DZIP1LQ8IYY4 767 aaKnown RBP28.86■■■□□ 2.21
PCDH1-204ENST00000503492 PIK3R4Q99570 1358 aa28.86■■■□□ 2.21
PCDH1-204ENST00000503492 IPO9Q96P70 1041 aaKnown RBP28.86■■■□□ 2.21
PCDH1-204ENST00000503492 TTC21AQ8NDW8 1320 aa28.85■■■□□ 2.21
PCDH1-204ENST00000503492 MVPQ14764 893 aaKnown RBP28.85■■■□□ 2.21
PCDH1-204ENST00000503492 PCDHB15Q9Y5E8 787 aa28.85■■■□□ 2.21
PCDH1-204ENST00000503492 PEAK1Q9H792 1746 aa28.85■■■□□ 2.21
PCDH1-204ENST00000503492 LAS1LQ9Y4W2 734 aaKnown RBP28.84■■■□□ 2.21
PCDH1-204ENST00000503492 DLG5Q8TDM6 1919 aa28.84■■■□□ 2.21
PCDH1-204ENST00000503492 RGS3P49796 1198 aa28.84■■■□□ 2.21
PCDH1-204ENST00000503492 NGDNQ8NEJ9 315 aaKnown RBP28.83■■■□□ 2.21
PCDH1-204ENST00000503492 TRIM27P14373 513 aa28.83■■■□□ 2.21
PCDH1-204ENST00000503492 FTSJ3Q8IY81 847 aaKnown RBP28.83■■■□□ 2.21
PCDH1-204ENST00000503492 CALD1Q05682 793 aaKnown RBP28.82■■■□□ 2.2
PCDH1-204ENST00000503492 NPM2Q86SE8 214 aaKnown RBP28.82■■■□□ 2.2
PCDH1-204ENST00000503492 NOB1Q9ULX3 412 aaKnown RBP28.81■■■□□ 2.2
PCDH1-204ENST00000503492 NOP58Q9Y2X3 529 aaKnown RBP28.81■■■□□ 2.2
PCDH1-204ENST00000503492 HSP90AB2PQ58FF8 381 aa28.8■■■□□ 2.2
PCDH1-204ENST00000503492 ATF7IPQ6VMQ6 1270 aa28.8■■■□□ 2.2
PCDH1-204ENST00000503492 AEBP1Q8IUX7 1158 aa28.8■■■□□ 2.2
PCDH1-204ENST00000503492 IFT57Q9NWB7 429 aa28.8■■■□□ 2.2
PCDH1-204ENST00000503492 ANKARQ7Z5J8 1434 aa28.8■■■□□ 2.2
PCDH1-204ENST00000503492 SOX12O15370 315 aa28.79■■■□□ 2.2
PCDH1-204ENST00000503492 ZNF853P0CG23 659 aa28.79■■■□□ 2.2
PCDH1-204ENST00000503492 ALDH1L2Q3SY69 923 aa28.79■■■□□ 2.2
PCDH1-204ENST00000503492 GNAI1P63096 354 aa28.79■■■□□ 2.2
PCDH1-204ENST00000503492 SULT6B1Q6IMI4 303 aa28.79■■■□□ 2.2
PCDH1-204ENST00000503492 LMOD3Q0VAK6 560 aa28.78■■■□□ 2.2
PCDH1-204ENST00000503492 ZNF142P52746 1687 aaPredicted RBP28.78■■■□□ 2.2
PCDH1-204ENST00000503492 ANKLE2Q86XL3 938 aa28.77■■■□□ 2.2
PCDH1-204ENST00000503492 FMN2Q9NZ56 1722 aa28.77■■■□□ 2.2
PCDH1-204ENST00000503492 PAK3O75914 559 aaPredicted RBP28.77■■■□□ 2.2
PCDH1-204ENST00000503492 FAM161AQ3B820 660 aa28.77■■■□□ 2.2
PCDH1-204ENST00000503492 ADAMTSL3P82987 1691 aa28.76■■■□□ 2.2
PCDH1-204ENST00000503492 RGPD1P0DJD0 1748 aa28.76■■■□□ 2.19
PCDH1-204ENST00000503492 C8orf34Q49A92 452 aa28.76■■■□□ 2.19
PCDH1-204ENST00000503492 KIF16BQ96L93 1317 aa28.76■■■□□ 2.19
PCDH1-204ENST00000503492 FAM83GA6ND36 823 aa28.75■■■□□ 2.19
PCDH1-204ENST00000503492 MYT1Q01538 1121 aa28.75■■■□□ 2.19
PCDH1-204ENST00000503492 MBIPQ9NS73 344 aa28.75■■■□□ 2.19
PCDH1-204ENST00000503492 MAP3K19Q56UN5 1328 aa28.75■■■□□ 2.19
PCDH1-204ENST00000503492 PIK3C2AO00443 1686 aa28.75■■■□□ 2.19
PCDH1-204ENST00000503492 ZNF428Q96B54 188 aa28.74■■■□□ 2.19
PCDH1-204ENST00000503492 CHD2O14647 1828 aaKnown RBP28.74■■■□□ 2.19
PCDH1-204ENST00000503492 VAMP4O75379 141 aa28.74■■■□□ 2.19
PCDH1-204ENST00000503492 TSPYL6Q8N831 410 aa28.73■■■□□ 2.19
PCDH1-204ENST00000503492 CFAP44Q96MT7 982 aa28.73■■■□□ 2.19
PCDH1-204ENST00000503492 IPO8O15397 1037 aaKnown RBP28.72■■■□□ 2.19
PCDH1-204ENST00000503492 DCTN1Q14203 1278 aa28.72■■■□□ 2.19
PCDH1-204ENST00000503492 BRPF1P55201 1214 aaPredicted RBP28.72■■■□□ 2.19
PCDH1-204ENST00000503492 ITPRIPQ8IWB1 547 aa28.71■■■□□ 2.19
PCDH1-204ENST00000503492 DDX19BQ9UMR2 479 aa28.71■■■□□ 2.19
PCDH1-204ENST00000503492 TMEM57Q8N5G2 664 aa28.7■■■□□ 2.19
PCDH1-204ENST00000503492 RWDD1Q9H446 243 aaPredicted RBP28.7■■■□□ 2.19
PCDH1-204ENST00000503492 ZBTB47Q9UFB7 747 aaPredicted RBP28.7■■■□□ 2.18
PCDH1-204ENST00000503492 SBNO1A3KN83 1393 aa28.7■■■□□ 2.18
PCDH1-204ENST00000503492 FLT4P35916 1363 aa28.68■■■□□ 2.18
PCDH1-204ENST00000503492 NLRP6P59044 892 aa28.67■■■□□ 2.18
PCDH1-204ENST00000503492 MRPL50Q8N5N7 158 aaKnown RBP28.67■■■□□ 2.18
PCDH1-204ENST00000503492 SETD1BQ9UPS6 1966 aaKnown RBP28.66■■■□□ 2.18
PCDH1-204ENST00000503492 ARHGEF10O15013 1369 aa28.66■■■□□ 2.18
PCDH1-204ENST00000503492 ELL2O00472 640 aaPredicted RBP28.66■■■□□ 2.18
PCDH1-204ENST00000503492 C8orf58Q8NAV2 365 aa28.65■■■□□ 2.18
PCDH1-204ENST00000503492 MARF1Q9Y4F3 1742 aaKnown RBP28.65■■■□□ 2.18
PCDH1-204ENST00000503492 TWISTNBQ3B726 338 aaPredicted RBP28.65■■■□□ 2.18
PCDH1-204ENST00000503492 PDZRN3Q9UPQ7 1066 aa28.65■■■□□ 2.18
PCDH1-204ENST00000503492 RBM33Q96EV2 1170 aaKnown RBP28.64■■■□□ 2.18
PCDH1-204ENST00000503492 AMPHP49418 695 aa28.64■■■□□ 2.17
PCDH1-204ENST00000503492 NUTM2GQ5VZR2 741 aa28.62■■■□□ 2.17
PCDH1-204ENST00000503492 ZBTB40Q9NUA8 1239 aa28.62■■■□□ 2.17
PCDH1-204ENST00000503492 USP54Q70EL1 1684 aa28.61■■■□□ 2.17
PCDH1-204ENST00000503492 ARHGAP45Q92619 1136 aa28.6■■■□□ 2.17
PCDH1-204ENST00000503492 HDAC1Q13547 482 aaPredicted RBP28.6■■■□□ 2.17
PCDH1-204ENST00000503492 MCM10Q7L590 875 aa28.6■■■□□ 2.17
PCDH1-204ENST00000503492 PHF8Q9UPP1 1060 aa28.6■■■□□ 2.17
PCDH1-204ENST00000503492 KDRP35968 1356 aa28.59■■■□□ 2.17
PCDH1-204ENST00000503492 ABTB2Q8N961 1025 aa28.59■■■□□ 2.17
PCDH1-204ENST00000503492 EYA1Q99502 592 aa28.59■■■□□ 2.17
PCDH1-204ENST00000503492 VIRMAQ69YN4 1812 aaKnown RBP28.58■■■□□ 2.17
PCDH1-204ENST00000503492 IGSF1Q8N6C5 1336 aa28.58■■■□□ 2.17
PCDH1-204ENST00000503492 CHL1O00533 1208 aa28.57■■■□□ 2.16
PCDH1-204ENST00000503492 NPHP4O75161 1426 aaPredicted RBP28.57■■■□□ 2.16
PCDH1-204ENST00000503492 ADGRL3Q9HAR2 1447 aa28.56■■■□□ 2.16
PCDH1-204ENST00000503492 MTHFSDQ2M296 383 aaKnown RBP28.55■■■□□ 2.16
PCDH1-204ENST00000503492 HOXC9P31274 260 aa28.54■■■□□ 2.16
PCDH1-204ENST00000503492 KIF24Q5T7B8 1368 aa28.54■■■□□ 2.16
PCDH1-204ENST00000503492 FOXO3O43524 673 aa28.54■■■□□ 2.16
PCDH1-204ENST00000503492 CRB1P82279 1406 aa28.53■■■□□ 2.16
PCDH1-204ENST00000503492 KRT24Q2M2I5 525 aa28.52■■■□□ 2.16
PCDH1-204ENST00000503492 DDRGK1Q96HY6 314 aa28.52■■■□□ 2.16
PCDH1-204ENST00000503492 ABCC4O15439 1325 aa28.52■■■□□ 2.16
PCDH1-204ENST00000503492 ZBTB7BO15156 539 aaPredicted RBP28.51■■■□□ 2.15
PCDH1-204ENST00000503492 C14orf37Q86TY3 774 aa28.51■■■□□ 2.15
PCDH1-204ENST00000503492 SMC5Q8IY18 1101 aa28.5■■■□□ 2.15
PCDH1-204ENST00000503492 ESCO1Q5FWF5 840 aa28.48■■■□□ 2.15
PCDH1-204ENST00000503492 KIAA0232Q92628 1395 aa28.48■■■□□ 2.15
PCDH1-204ENST00000503492 NWD1Q149M9 1564 aa28.48■■■□□ 2.15
PCDH1-204ENST00000503492 API5Q9BZZ5 524 aaKnown RBP28.46■■■□□ 2.15
PCDH1-204ENST00000503492 GAS2L2Q8NHY3 880 aa28.46■■■□□ 2.15
PCDH1-204ENST00000503492 RTF1Q92541 710 aaKnown RBP28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms