RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 MAP2P11137 1827 aaKnown RBP18.75■□□□□ 0.59
NEAT1-201ENST00000499732 PHF8Q9UPP1 1060 aa18.74■□□□□ 0.59
NEAT1-201ENST00000499732 SSH2Q76I76 1423 aa18.74■□□□□ 0.59
NEAT1-201ENST00000499732 ZNF772Q68DY9 489 aaPredicted RBP18.74■□□□□ 0.59
NEAT1-201ENST00000499732 TTC21BQ7Z4L5 1316 aa18.74■□□□□ 0.59
NEAT1-201ENST00000499732 MST1RQ04912 1400 aa18.73■□□□□ 0.59
NEAT1-201ENST00000499732 C1orf167Q5SNV9 1468 aa18.73■□□□□ 0.59
NEAT1-201ENST00000499732 APAF1O14727 1248 aa18.73■□□□□ 0.59
NEAT1-201ENST00000499732 NME9Q86XW9 330 aa18.73■□□□□ 0.59
NEAT1-201ENST00000499732 TTC21AQ8NDW8 1320 aa18.72■□□□□ 0.59
NEAT1-201ENST00000499732 PNPLA6Q8IY17 1366 aa18.72■□□□□ 0.59
NEAT1-201ENST00000499732 KIF1AQ12756 1690 aa18.71■□□□□ 0.59
NEAT1-201ENST00000499732 ESCO1Q5FWF5 840 aa18.71■□□□□ 0.59
NEAT1-201ENST00000499732 LRRC59Q96AG4 307 aaKnown RBP18.71■□□□□ 0.59
NEAT1-201ENST00000499732 C8orf34Q49A92 452 aa18.7■□□□□ 0.58
NEAT1-201ENST00000499732 SKAP1Q86WV1 359 aa18.7■□□□□ 0.58
NEAT1-201ENST00000499732 COG3Q96JB2 828 aa18.7■□□□□ 0.58
NEAT1-201ENST00000499732 ZRANB1Q9UGI0 708 aa18.7■□□□□ 0.58
NEAT1-201ENST00000499732 E9PSI1 815 aa18.68■□□□□ 0.58
NEAT1-201ENST00000499732 RUNDC1Q96C34 613 aa18.68■□□□□ 0.58
NEAT1-201ENST00000499732 ORAI2Q96SN7 254 aa18.68■□□□□ 0.58
NEAT1-201ENST00000499732 AATKQ6ZMQ8 1374 aa18.68■□□□□ 0.58
NEAT1-201ENST00000499732 POLKQ9UBT6 870 aa18.67■□□□□ 0.58
NEAT1-201ENST00000499732 U2AF1L5P0DN76 240 aaPredicted RBP18.66■□□□□ 0.58
NEAT1-201ENST00000499732 FBLN1P23142 703 aa18.66■□□□□ 0.58
NEAT1-201ENST00000499732 U2AF1Q01081 240 aaKnown RBP eCLIP18.66■□□□□ 0.584e-43■□□□□ 10.7
NEAT1-201ENST00000499732 DAXXQ9UER7 740 aaPredicted RBP18.66■□□□□ 0.58
NEAT1-201ENST00000499732 LRP6O75581 1613 aa18.66■□□□□ 0.58
NEAT1-201ENST00000499732 OVOS2A0A0J9YW53 1432 aa18.66■□□□□ 0.58
NEAT1-201ENST00000499732 OVOS2Q6IE36 1432 aa18.66■□□□□ 0.58
NEAT1-201ENST00000499732 CDK12Q9NYV4 1490 aaPredicted RBP18.65■□□□□ 0.58
NEAT1-201ENST00000499732 USP31Q70CQ4 1352 aa18.65■□□□□ 0.58
NEAT1-201ENST00000499732 NUTM2BA6NNL0 878 aaPredicted RBP18.65■□□□□ 0.58
NEAT1-201ENST00000499732 NUTM2EB1AL46 878 aaPredicted RBP18.65■□□□□ 0.58
NEAT1-201ENST00000499732 PSME1Q06323 249 aa18.65■□□□□ 0.58
NEAT1-201ENST00000499732 NUTM2AQ8IVF1 878 aaPredicted RBP18.65■□□□□ 0.58
NEAT1-201ENST00000499732 DIAPH1O60610 1272 aaKnown RBP18.64■□□□□ 0.57
NEAT1-201ENST00000499732 PIK3C2AO00443 1686 aa18.64■□□□□ 0.57
NEAT1-201ENST00000499732 TCP11L2Q8N4U5 519 aa18.63■□□□□ 0.57
NEAT1-201ENST00000499732 NFKBIBQ15653 356 aa18.63■□□□□ 0.57
NEAT1-201ENST00000499732 EMILIN1Q9Y6C2 1016 aa18.63■□□□□ 0.57
NEAT1-201ENST00000499732 U2SURPO15042 1029 aaKnown RBP18.62■□□□□ 0.57
NEAT1-201ENST00000499732 PDE3AQ14432 1141 aa18.62■□□□□ 0.57
NEAT1-201ENST00000499732 USP54Q70EL1 1684 aa18.61■□□□□ 0.57
NEAT1-201ENST00000499732 FOXO3O43524 673 aa18.6■□□□□ 0.57
NEAT1-201ENST00000499732 RXRBP28702 533 aa18.6■□□□□ 0.57
NEAT1-201ENST00000499732 WWC1Q8IX03 1113 aa18.6■□□□□ 0.57
NEAT1-201ENST00000499732 PLEKHF1Q96S99 279 aa18.6■□□□□ 0.57
NEAT1-201ENST00000499732 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
NEAT1-201ENST00000499732 GSE1Q14687 1217 aa18.6■□□□□ 0.57
NEAT1-201ENST00000499732 NCBP3Q53F19 620 aaKnown RBP18.6■□□□□ 0.57
NEAT1-201ENST00000499732 TRPM3Q9HCF6 1732 aaPredicted RBP18.59■□□□□ 0.57
NEAT1-201ENST00000499732 NHSL1Q5SYE7 1610 aa18.59■□□□□ 0.57
NEAT1-201ENST00000499732 ABTB2Q8N961 1025 aa18.59■□□□□ 0.57
NEAT1-201ENST00000499732 RRP7AQ9Y3A4 280 aaKnown RBP18.59■□□□□ 0.57
NEAT1-201ENST00000499732 MARF1Q9Y4F3 1742 aaKnown RBP18.58■□□□□ 0.57
NEAT1-201ENST00000499732 NLRP6P59044 892 aa18.58■□□□□ 0.57
NEAT1-201ENST00000499732 XPCQ01831 940 aaPredicted RBP18.58■□□□□ 0.57
NEAT1-201ENST00000499732 RRS1Q15050 365 aaKnown RBP18.58■□□□□ 0.56
NEAT1-201ENST00000499732 CCDC27Q2M243 656 aa18.58■□□□□ 0.56
NEAT1-201ENST00000499732 AFF2P51816 1311 aa18.57■□□□□ 0.56
NEAT1-201ENST00000499732 MAPK8IP3Q9UPT6 1336 aa18.57■□□□□ 0.56
NEAT1-201ENST00000499732 PEAK1Q9H792 1746 aa18.57■□□□□ 0.56
NEAT1-201ENST00000499732 AAMPQ13685 434 aa18.57■□□□□ 0.56
NEAT1-201ENST00000499732 NEUROD2Q15784 382 aa18.57■□□□□ 0.56
NEAT1-201ENST00000499732 KRT28Q7Z3Y7 464 aa18.57■□□□□ 0.56
NEAT1-201ENST00000499732 DDX17Q92841 729 aaKnown RBP18.57■□□□□ 0.56
NEAT1-201ENST00000499732 BCAR3O75815 825 aa18.56■□□□□ 0.56
NEAT1-201ENST00000499732 RGS3P49796 1198 aa18.56■□□□□ 0.56
NEAT1-201ENST00000499732 SOS2Q07890 1332 aaPredicted RBP18.56■□□□□ 0.56
NEAT1-201ENST00000499732 IL13P35225 146 aa18.56■□□□□ 0.56
NEAT1-201ENST00000499732 NPHP3Q7Z494 1330 aa18.55■□□□□ 0.56
NEAT1-201ENST00000499732 IL27Q8NEV9 243 aa18.55■□□□□ 0.56
NEAT1-201ENST00000499732 C8orf37Q96NL8 207 aa18.55■□□□□ 0.56
NEAT1-201ENST00000499732 PXDNQ92626 1479 aa18.54■□□□□ 0.56
NEAT1-201ENST00000499732 FCHSD2O94868 740 aa18.53■□□□□ 0.56
NEAT1-201ENST00000499732 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
NEAT1-201ENST00000499732 CLUAP1Q96AJ1 413 aa18.53■□□□□ 0.56
NEAT1-201ENST00000499732 RSPH6AQ9H0K4 717 aa18.53■□□□□ 0.56
NEAT1-201ENST00000499732 SLC4A3P48751 1232 aa18.53■□□□□ 0.56
NEAT1-201ENST00000499732 NUTM2GQ5VZR2 741 aa18.53■□□□□ 0.56
NEAT1-201ENST00000499732 ALS2Q96Q42 1657 aa18.53■□□□□ 0.56
NEAT1-201ENST00000499732 SBNO1A3KN83 1393 aa18.52■□□□□ 0.56
NEAT1-201ENST00000499732 TMPOP42166 694 aaKnown RBP18.52■□□□□ 0.56
NEAT1-201ENST00000499732 NGLY1Q96IV0 654 aa18.52■□□□□ 0.56
NEAT1-201ENST00000499732 PNNQ9H307 717 aaKnown RBP18.52■□□□□ 0.56
NEAT1-201ENST00000499732 RBM6P78332 1123 aaKnown RBP18.51■□□□□ 0.55
NEAT1-201ENST00000499732 QTRT2Q9H974 415 aaKnown RBP18.51■□□□□ 0.55
NEAT1-201ENST00000499732 ADAMTS2O95450 1211 aa18.5■□□□□ 0.55
NEAT1-201ENST00000499732 IGHDP01880 384 aa18.5■□□□□ 0.55
NEAT1-201ENST00000499732 KCNH5Q8NCM2 988 aa18.5■□□□□ 0.55
NEAT1-201ENST00000499732 RGPD1P0DJD0 1748 aa18.5■□□□□ 0.55
NEAT1-201ENST00000499732 TNS3Q68CZ2 1445 aa18.5■□□□□ 0.55
NEAT1-201ENST00000499732 KIF24Q5T7B8 1368 aa18.5■□□□□ 0.55
NEAT1-201ENST00000499732 SOX12O15370 315 aa18.49■□□□□ 0.55
NEAT1-201ENST00000499732 PRKAR2BP31323 418 aa18.49■□□□□ 0.55
NEAT1-201ENST00000499732 CANXP27824 592 aaKnown RBP18.49■□□□□ 0.55
NEAT1-201ENST00000499732 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
NEAT1-201ENST00000499732 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
NEAT1-201ENST00000499732 USP19O94966 1318 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms