RNA–Protein interactions for RNA: ENST00000494509.1

AC055758.1-201, humanhuman

TSL 3 BASIC

Gene AC055758.1, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055758.1-201ENST00000494509 DESI1Q6ICB0 168 aa9.74□□□□□ -0.85
AC055758.1-201ENST00000494509 RSBN1LQ6PCB5 846 aaPredicted RBP9.74□□□□□ -0.85
AC055758.1-201ENST00000494509 TBC1D2Q9BYX2 928 aa9.74□□□□□ -0.85
AC055758.1-201ENST00000494509 CUL7Q14999 1698 aa9.74□□□□□ -0.85
AC055758.1-201ENST00000494509 PARP9Q8IXQ6 854 aa9.73□□□□□ -0.85
AC055758.1-201ENST00000494509 ERBB4Q15303 1308 aa9.73□□□□□ -0.85
AC055758.1-201ENST00000494509 VARSP26640 1264 aaKnown RBP9.72□□□□□ -0.85
AC055758.1-201ENST00000494509 LYPD8Q6UX82 237 aa9.72□□□□□ -0.85
AC055758.1-201ENST00000494509 FOXJ1Q92949 421 aa9.72□□□□□ -0.85
AC055758.1-201ENST00000494509 MAP10Q9P2G4 905 aa9.72□□□□□ -0.85
AC055758.1-201ENST00000494509 TOP2BQ02880 1626 aa9.71□□□□□ -0.85
AC055758.1-201ENST00000494509 SOBPA7XYQ1 873 aa9.71□□□□□ -0.86
AC055758.1-201ENST00000494509 TIMP2P16035 220 aa9.71□□□□□ -0.86
AC055758.1-201ENST00000494509 KLF16Q9BXK1 252 aaPredicted RBP9.71□□□□□ -0.86
AC055758.1-201ENST00000494509 SPDYE5A6NIY4 337 aa9.7□□□□□ -0.86
AC055758.1-201ENST00000494509 H3BM21 787 aa9.7□□□□□ -0.86
AC055758.1-201ENST00000494509 F12P00748 615 aaPredicted RBP9.7□□□□□ -0.86
AC055758.1-201ENST00000494509 HRCP23327 699 aa9.7□□□□□ -0.86
AC055758.1-201ENST00000494509 CTHP32929 405 aa9.7□□□□□ -0.86
AC055758.1-201ENST00000494509 MPNDQ8N594 471 aa9.7□□□□□ -0.86
AC055758.1-201ENST00000494509 CABLES1Q8TDN4 633 aa9.7□□□□□ -0.86
AC055758.1-201ENST00000494509 SLC16A10Q8TF71 515 aa9.7□□□□□ -0.86
AC055758.1-201ENST00000494509 GLI2P10070 1586 aa9.7□□□□□ -0.86
AC055758.1-201ENST00000494509 C4orf48Q5BLP8 95 aa9.69□□□□□ -0.86
AC055758.1-201ENST00000494509 MRPL14Q6P1L8 145 aaKnown RBP9.69□□□□□ -0.86
AC055758.1-201ENST00000494509 LMTK3Q96Q04 1460 aa9.68□□□□□ -0.86
AC055758.1-201ENST00000494509 SPTLC1O15269 473 aa9.68□□□□□ -0.86
AC055758.1-201ENST00000494509 WDR4P57081 412 aaKnown RBP9.68□□□□□ -0.86
AC055758.1-201ENST00000494509 PURBQ96QR8 312 aaKnown RBP9.68□□□□□ -0.86
AC055758.1-201ENST00000494509 MAP3K4Q9Y6R4 1608 aa9.67□□□□□ -0.86
AC055758.1-201ENST00000494509 TTBK1Q5TCY1 1321 aaPredicted RBP9.67□□□□□ -0.86
AC055758.1-201ENST00000494509 PLEKHG3A1L390 1219 aa9.67□□□□□ -0.86
AC055758.1-201ENST00000494509 TRIM66O15016 1216 aa9.67□□□□□ -0.86
AC055758.1-201ENST00000494509 PER1O15534 1290 aaPredicted RBP9.67□□□□□ -0.86
AC055758.1-201ENST00000494509 GJA5P36382 358 aa9.67□□□□□ -0.86
AC055758.1-201ENST00000494509 PLB1Q6P1J6 1458 aa9.66□□□□□ -0.86
AC055758.1-201ENST00000494509 COL17A1Q9UMD9 1497 aaPredicted RBP9.66□□□□□ -0.86
AC055758.1-201ENST00000494509 ASXL2Q76L83 1435 aa9.66□□□□□ -0.86
AC055758.1-201ENST00000494509 NR3C2P08235 984 aa9.66□□□□□ -0.86
AC055758.1-201ENST00000494509 NPAS3Q8IXF0 933 aa9.66□□□□□ -0.86
AC055758.1-201ENST00000494509 IRF7Q92985 503 aa9.66□□□□□ -0.86
AC055758.1-201ENST00000494509 ZFAND3Q9H8U3 227 aa9.66□□□□□ -0.86
AC055758.1-201ENST00000494509 ABCC2Q92887 1545 aa9.66□□□□□ -0.86
AC055758.1-201ENST00000494509 ADH1CP00326 375 aa9.65□□□□□ -0.86
AC055758.1-201ENST00000494509 CSPP1Q1MSJ5 1256 aa9.65□□□□□ -0.86
AC055758.1-201ENST00000494509 CDK15Q96Q40 435 aa9.65□□□□□ -0.86
AC055758.1-201ENST00000494509 TEX14Q8IWB6 1497 aa9.65□□□□□ -0.87
AC055758.1-201ENST00000494509 KIF21BO75037 1637 aa9.64□□□□□ -0.87
AC055758.1-201ENST00000494509 SLC24A1O60721 1099 aa9.64□□□□□ -0.87
AC055758.1-201ENST00000494509 RIC3Q7Z5B4 369 aa9.64□□□□□ -0.87
AC055758.1-201ENST00000494509 FAM174AQ8TBP5 190 aa9.64□□□□□ -0.87
AC055758.1-201ENST00000494509 ZBTB3Q9H5J0 574 aa9.64□□□□□ -0.87
AC055758.1-201ENST00000494509 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
AC055758.1-201ENST00000494509 PTPRGP23470 1445 aa9.64□□□□□ -0.87
AC055758.1-201ENST00000494509 KIAA0586Q9BVV6 1533 aa9.63□□□□□ -0.87
AC055758.1-201ENST00000494509 ARID5BQ14865 1188 aa9.63□□□□□ -0.87
AC055758.1-201ENST00000494509 ZSCAN1Q8NBB4 408 aa9.63□□□□□ -0.87
AC055758.1-201ENST00000494509 ITPKCQ96DU7 683 aa9.63□□□□□ -0.87
AC055758.1-201ENST00000494509 QPCTQ16769 361 aa9.62□□□□□ -0.87
AC055758.1-201ENST00000494509 ZIC2O95409 532 aaPredicted RBP9.61□□□□□ -0.87
AC055758.1-201ENST00000494509 GRM5P41594 1212 aa9.61□□□□□ -0.87
AC055758.1-201ENST00000494509 PRPF38BQ5VTL8 546 aaKnown RBP9.61□□□□□ -0.87
AC055758.1-201ENST00000494509 EPRSP07814 1512 aaKnown RBP9.61□□□□□ -0.87
AC055758.1-201ENST00000494509 ZCCHC11Q5TAX3 1644 aaKnown RBP9.6□□□□□ -0.87
AC055758.1-201ENST00000494509 DIXDC1Q155Q3 683 aa9.6□□□□□ -0.87
AC055758.1-201ENST00000494509 SCARF1Q14162 830 aa9.59□□□□□ -0.87
AC055758.1-201ENST00000494509 MYSM1Q5VVJ2 828 aa9.59□□□□□ -0.87
AC055758.1-201ENST00000494509 C6orf118Q5T5N4 469 aa9.58□□□□□ -0.88
AC055758.1-201ENST00000494509 TNIKQ9UKE5 1360 aa9.58□□□□□ -0.88
AC055758.1-201ENST00000494509 CARMIL2Q6F5E8 1435 aa9.57□□□□□ -0.88
AC055758.1-201ENST00000494509 TSC1Q92574 1164 aa9.57□□□□□ -0.88
AC055758.1-201ENST00000494509 AK7Q96M32 723 aa9.57□□□□□ -0.88
AC055758.1-201ENST00000494509 CFAP43Q8NDM7 1665 aa9.56□□□□□ -0.88
AC055758.1-201ENST00000494509 UHRF1BP1LA0JNW5 1464 aa9.56□□□□□ -0.88
AC055758.1-201ENST00000494509 LILRB3O75022 631 aa9.56□□□□□ -0.88
AC055758.1-201ENST00000494509 VSIG8P0DPA2 414 aa9.56□□□□□ -0.88
AC055758.1-201ENST00000494509 NR5A1Q13285 461 aa9.56□□□□□ -0.88
AC055758.1-201ENST00000494509 AGERQ15109 404 aa9.56□□□□□ -0.88
AC055758.1-201ENST00000494509 RTL5Q5HYW3 569 aaPredicted RBP9.56□□□□□ -0.88
AC055758.1-201ENST00000494509 SH3RF1Q7Z6J0 888 aa9.56□□□□□ -0.88
AC055758.1-201ENST00000494509 C1QTNF2Q9BXJ5 285 aa9.56□□□□□ -0.88
AC055758.1-201ENST00000494509 SOCS7O14512 581 aa9.55□□□□□ -0.88
AC055758.1-201ENST00000494509 UACAQ9BZF9 1416 aa9.55□□□□□ -0.88
AC055758.1-201ENST00000494509 IQGAP2Q13576 1575 aa9.54□□□□□ -0.88
AC055758.1-201ENST00000494509 DISP3Q9P2K9 1392 aa9.54□□□□□ -0.88
AC055758.1-201ENST00000494509 PDE4DQ08499 809 aa9.54□□□□□ -0.88
AC055758.1-201ENST00000494509 BPHLQ86WA6 291 aaPredicted RBP9.54□□□□□ -0.88
AC055758.1-201ENST00000494509 ADAMTSL3P82987 1691 aa9.54□□□□□ -0.88
AC055758.1-201ENST00000494509 PCF11O94913 1555 aaKnown RBP9.54□□□□□ -0.88
AC055758.1-201ENST00000494509 KDM5BQ9UGL1 1544 aa9.53□□□□□ -0.88
AC055758.1-201ENST00000494509 FSHRP23945 695 aa9.53□□□□□ -0.88
AC055758.1-201ENST00000494509 ILDR2Q71H61 639 aa9.53□□□□□ -0.88
AC055758.1-201ENST00000494509 SH3BP5LQ7L8J4 393 aa9.53□□□□□ -0.88
AC055758.1-201ENST00000494509 LINC00528Q8N1L1 170 aa9.53□□□□□ -0.88
AC055758.1-201ENST00000494509 MEIOBQ8N635 442 aa9.53□□□□□ -0.88
AC055758.1-201ENST00000494509 PTPRMP28827 1452 aa9.53□□□□□ -0.88
AC055758.1-201ENST00000494509 FAM181BA6NEQ2 426 aa9.52□□□□□ -0.89
AC055758.1-201ENST00000494509 NUTM2BA6NNL0 878 aaPredicted RBP9.52□□□□□ -0.89
AC055758.1-201ENST00000494509 NUTM2EB1AL46 878 aaPredicted RBP9.52□□□□□ -0.89
AC055758.1-201ENST00000494509 TUSC1Q2TAM9 212 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms