RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 NGDNQ8NEJ9 315 aaKnown RBP8.3□□□□□ -1.08
RTN4IP1-202ENST00000493619 PARD3Q8TEW0 1356 aa8.3□□□□□ -1.08
RTN4IP1-202ENST00000493619 PLEKHH1Q9ULM0 1364 aa8.3□□□□□ -1.08
RTN4IP1-202ENST00000493619 RALGAPBQ86X10 1494 aa8.3□□□□□ -1.08
RTN4IP1-202ENST00000493619 RGPD8O14715 1765 aaPredicted RBP8.3□□□□□ -1.08
RTN4IP1-202ENST00000493619 ABCC6O95255 1503 aa8.29□□□□□ -1.08
RTN4IP1-202ENST00000493619 PLEKHG3A1L390 1219 aa8.29□□□□□ -1.08
RTN4IP1-202ENST00000493619 THRAP3Q9Y2W1 955 aaKnown RBP8.29□□□□□ -1.08
RTN4IP1-202ENST00000493619 PCDHB13Q9Y5F0 798 aa8.29□□□□□ -1.08
RTN4IP1-202ENST00000493619 SBNO2Q9Y2G9 1366 aa8.29□□□□□ -1.08
RTN4IP1-202ENST00000493619 CPDO75976 1380 aa8.28□□□□□ -1.08
RTN4IP1-202ENST00000493619 DDX17Q92841 729 aaKnown RBP8.28□□□□□ -1.08
RTN4IP1-202ENST00000493619 PCDH10Q9P2E7 1040 aa8.28□□□□□ -1.08
RTN4IP1-202ENST00000493619 TRAK1Q9UPV9 953 aa8.28□□□□□ -1.08
RTN4IP1-202ENST00000493619 NRAPQ86VF7 1730 aa8.28□□□□□ -1.08
RTN4IP1-202ENST00000493619 DISP2A7MBM2 1401 aa8.28□□□□□ -1.08
RTN4IP1-202ENST00000493619 GLI3P10071 1580 aa8.27□□□□□ -1.09
RTN4IP1-202ENST00000493619 RGPD1P0DJD0 1748 aa8.27□□□□□ -1.09
RTN4IP1-202ENST00000493619 CRYBG1Q9Y4K1 1723 aa8.27□□□□□ -1.09
RTN4IP1-202ENST00000493619 SEC24BO95487 1268 aa8.27□□□□□ -1.09
RTN4IP1-202ENST00000493619 HMGB2P26583 209 aaKnown RBP8.27□□□□□ -1.09
RTN4IP1-202ENST00000493619 IER5LQ5T953 404 aa8.27□□□□□ -1.09
RTN4IP1-202ENST00000493619 PUS7Q96PZ0 661 aaKnown RBP8.27□□□□□ -1.09
RTN4IP1-202ENST00000493619 COLQQ9Y215 455 aaPredicted RBP8.27□□□□□ -1.09
RTN4IP1-202ENST00000493619 EVC2Q86UK5 1308 aa8.27□□□□□ -1.09
RTN4IP1-202ENST00000493619 CENPJQ9HC77 1338 aaPredicted RBP8.27□□□□□ -1.09
RTN4IP1-202ENST00000493619 TRPM1Q7Z4N2 1603 aa8.26□□□□□ -1.09
RTN4IP1-202ENST00000493619 NINLQ9Y2I6 1382 aa8.26□□□□□ -1.09
RTN4IP1-202ENST00000493619 ECM2O94769 699 aaPredicted RBP8.26□□□□□ -1.09
RTN4IP1-202ENST00000493619 BAG6P46379 1132 aa8.26□□□□□ -1.09
RTN4IP1-202ENST00000493619 NLRP13Q86W25 1043 aa8.26□□□□□ -1.09
RTN4IP1-202ENST00000493619 NUDT16Q96DE0 195 aaKnown RBP8.26□□□□□ -1.09
RTN4IP1-202ENST00000493619 FAM212AQ96EL1 285 aa8.26□□□□□ -1.09
RTN4IP1-202ENST00000493619 CDCA7Q9BWT1 371 aaPredicted RBP8.26□□□□□ -1.09
RTN4IP1-202ENST00000493619 TRIM35Q9UPQ4 493 aa8.26□□□□□ -1.09
RTN4IP1-202ENST00000493619 QRICH2Q9H0J4 1663 aa8.26□□□□□ -1.09
RTN4IP1-202ENST00000493619 PHRF1Q9P1Y6 1649 aaKnown RBP8.25□□□□□ -1.09
RTN4IP1-202ENST00000493619 LCE2DQ5TA82 110 aaPredicted RBP8.25□□□□□ -1.09
RTN4IP1-202ENST00000493619 KRT27Q7Z3Y8 459 aa8.25□□□□□ -1.09
RTN4IP1-202ENST00000493619 PRDM11Q9NQV5 511 aa8.25□□□□□ -1.09
RTN4IP1-202ENST00000493619 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
RTN4IP1-202ENST00000493619 TTC21AQ8NDW8 1320 aa8.25□□□□□ -1.09
RTN4IP1-202ENST00000493619 EP400Q96L91 3159 aa8.24□□□□□ -1.09
RTN4IP1-202ENST00000493619 LMOD2Q6P5Q4 547 aa8.24□□□□□ -1.09
RTN4IP1-202ENST00000493619 BARGINQ6ZT62 677 aa8.24□□□□□ -1.09
RTN4IP1-202ENST00000493619 IFNL1Q8IU54 200 aa8.24□□□□□ -1.09
RTN4IP1-202ENST00000493619 KCNH5Q8NCM2 988 aa8.24□□□□□ -1.09
RTN4IP1-202ENST00000493619 USP19O94966 1318 aa8.24□□□□□ -1.09
RTN4IP1-202ENST00000493619 SPATA31A5Q5VU36 1347 aa8.24□□□□□ -1.09
RTN4IP1-202ENST00000493619 SPATA31A7Q8IWB4 1347 aa8.24□□□□□ -1.09
RTN4IP1-202ENST00000493619 THSD7AQ9UPZ6 1657 aa8.24□□□□□ -1.09
RTN4IP1-202ENST00000493619 NUTM2FA1L443 756 aa8.23□□□□□ -1.09
RTN4IP1-202ENST00000493619 FAM196AQ6ZSG2 479 aa8.23□□□□□ -1.09
RTN4IP1-202ENST00000493619 SEPT12Q8IYM1 358 aa8.23□□□□□ -1.09
RTN4IP1-202ENST00000493619 FAM163AQ96GL9 167 aaPredicted RBP8.23□□□□□ -1.09
RTN4IP1-202ENST00000493619 CDK19Q9BWU1 502 aa8.23□□□□□ -1.09
RTN4IP1-202ENST00000493619 CCDC9Q9Y3X0 531 aaKnown RBP8.23□□□□□ -1.09
RTN4IP1-202ENST00000493619 RGPD3A6NKT7 1758 aaPredicted RBP8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 RGPD4Q7Z3J3 1758 aa8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 LRP5O75197 1615 aa8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 PPIP5K1Q6PFW1 1433 aa8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 SRPK2P78362 688 aaKnown RBP8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 XPCQ01831 940 aaPredicted RBP8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 SAFB2Q14151 953 aaKnown RBP eCLIP8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 NBPF8Q3BBV2 869 aa8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 KLHL34Q8N239 644 aa8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 PMFBP1Q8TBY8 1022 aa8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 BTG4Q9NY30 223 aa8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 TIMELESSQ9UNS1 1208 aa8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 ACEP12821 1306 aa8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 PRR36Q9H6K5 1346 aa8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 NRKQ7Z2Y5 1582 aa8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 ROCK2O75116 1388 aaKnown RBP8.22□□□□□ -1.09
RTN4IP1-202ENST00000493619 BCL9O00512 1426 aa8.21□□□□□ -1.09
RTN4IP1-202ENST00000493619 USP6P35125 1406 aa8.21□□□□□ -1.09
RTN4IP1-202ENST00000493619 SLIT3O75094 1523 aa8.21□□□□□ -1.1
RTN4IP1-202ENST00000493619 FAM83GA6ND36 823 aa8.21□□□□□ -1.1
RTN4IP1-202ENST00000493619 ABTB2Q8N961 1025 aa8.21□□□□□ -1.1
RTN4IP1-202ENST00000493619 BRWD3Q6RI45 1802 aa8.21□□□□□ -1.1
RTN4IP1-202ENST00000493619 SPATA31A1Q5TZJ5 1347 aa8.21□□□□□ -1.1
RTN4IP1-202ENST00000493619 AATKQ6ZMQ8 1374 aa8.21□□□□□ -1.1
RTN4IP1-202ENST00000493619 USP54Q70EL1 1684 aa8.21□□□□□ -1.1
RTN4IP1-202ENST00000493619 LMO7Q8WWI1 1683 aa8.21□□□□□ -1.1
RTN4IP1-202ENST00000493619 TULP1O00294 542 aaPredicted RBP8.2□□□□□ -1.1
RTN4IP1-202ENST00000493619 EVA1CP58658 441 aa8.2□□□□□ -1.1
RTN4IP1-202ENST00000493619 TMEM106CQ9BVX2 250 aa8.2□□□□□ -1.1
RTN4IP1-202ENST00000493619 HIRIP3Q9BW71 556 aaPredicted RBP8.2□□□□□ -1.1
RTN4IP1-202ENST00000493619 TSHZ2Q9NRE2 1034 aa8.2□□□□□ -1.1
RTN4IP1-202ENST00000493619 KIAA0232Q92628 1395 aa8.2□□□□□ -1.1
RTN4IP1-202ENST00000493619 PARP4Q9UKK3 1724 aaKnown RBP8.2□□□□□ -1.1
RTN4IP1-202ENST00000493619 CRB1P82279 1406 aa8.2□□□□□ -1.1
RTN4IP1-202ENST00000493619 SSH2Q76I76 1423 aa8.2□□□□□ -1.1
RTN4IP1-202ENST00000493619 TCP11L2Q8N4U5 519 aa8.19□□□□□ -1.1
RTN4IP1-202ENST00000493619 SPRYD3Q8NCJ5 442 aa8.19□□□□□ -1.1
RTN4IP1-202ENST00000493619 SPOCK2Q92563 424 aa8.19□□□□□ -1.1
RTN4IP1-202ENST00000493619 CLSPNQ9HAW4 1339 aa8.19□□□□□ -1.1
RTN4IP1-202ENST00000493619 AKAP12Q02952 1782 aa8.18□□□□□ -1.1
RTN4IP1-202ENST00000493619 A0A0G2JS52 829 aa8.18□□□□□ -1.1
RTN4IP1-202ENST00000493619 GCP02774 474 aa8.18□□□□□ -1.1
RTN4IP1-202ENST00000493619 MYT1Q01538 1121 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms