RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 CALD1Q05682 793 aaKnown RBP20.33■□□□□ 0.85
SEMA4D-220ENST00000492386 IFT57Q9NWB7 429 aa20.33■□□□□ 0.85
SEMA4D-220ENST00000492386 METP08581 1390 aa20.33■□□□□ 0.84
SEMA4D-220ENST00000492386 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
SEMA4D-220ENST00000492386 ARHGAP45Q92619 1136 aa20.32■□□□□ 0.84
SEMA4D-220ENST00000492386 ZRANB1Q9UGI0 708 aa20.32■□□□□ 0.84
SEMA4D-220ENST00000492386 ZBTB7BO15156 539 aaPredicted RBP20.32■□□□□ 0.84
SEMA4D-220ENST00000492386 KNDC1Q76NI1 1749 aa20.32■□□□□ 0.84
SEMA4D-220ENST00000492386 CPS1P31327 1500 aa20.31■□□□□ 0.84
SEMA4D-220ENST00000492386 GNAI1P63096 354 aa20.31■□□□□ 0.84
SEMA4D-220ENST00000492386 CHD1LQ86WJ1 897 aa20.31■□□□□ 0.84
SEMA4D-220ENST00000492386 AKAP12Q02952 1782 aa20.31■□□□□ 0.84
SEMA4D-220ENST00000492386 LNPKQ9C0E8 428 aa20.31■□□□□ 0.84
SEMA4D-220ENST00000492386 MBIPQ9NS73 344 aa20.31■□□□□ 0.84
SEMA4D-220ENST00000492386 C3P01024 1663 aa20.3■□□□□ 0.84
SEMA4D-220ENST00000492386 NUDT16Q96DE0 195 aaKnown RBP20.29■□□□□ 0.84
SEMA4D-220ENST00000492386 ABCC4O15439 1325 aa20.28■□□□□ 0.84
SEMA4D-220ENST00000492386 ITSN1Q15811 1721 aa20.28■□□□□ 0.84
SEMA4D-220ENST00000492386 TXNDC2Q86VQ3 553 aa20.28■□□□□ 0.84
SEMA4D-220ENST00000492386 SPRYD3Q8NCJ5 442 aa20.28■□□□□ 0.84
SEMA4D-220ENST00000492386 NCKAP5LQ9HCH0 1330 aa20.28■□□□□ 0.84
SEMA4D-220ENST00000492386 TECPR2O15040 1411 aa20.27■□□□□ 0.84
SEMA4D-220ENST00000492386 MLECQ14165 292 aa20.27■□□□□ 0.84
SEMA4D-220ENST00000492386 CHMP4BQ9H444 224 aaKnown RBP20.27■□□□□ 0.84
SEMA4D-220ENST00000492386 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.83
SEMA4D-220ENST00000492386 RBM25P49756 843 aaKnown RBP20.26■□□□□ 0.83
SEMA4D-220ENST00000492386 GCC1Q96CN9 775 aa20.26■□□□□ 0.83
SEMA4D-220ENST00000492386 COG3Q96JB2 828 aa20.26■□□□□ 0.83
SEMA4D-220ENST00000492386 CFAP44Q96MT7 982 aa20.26■□□□□ 0.83
SEMA4D-220ENST00000492386 ELL2O00472 640 aaPredicted RBP20.26■□□□□ 0.83
SEMA4D-220ENST00000492386 BMP2KLQ5H9B9 411 aa20.26■□□□□ 0.83
SEMA4D-220ENST00000492386 C1orf115Q9H7X2 142 aa20.26■□□□□ 0.83
SEMA4D-220ENST00000492386 CCDC61Q9Y6R9 512 aa20.26■□□□□ 0.83
SEMA4D-220ENST00000492386 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
SEMA4D-220ENST00000492386 TWISTNBQ3B726 338 aaPredicted RBP20.25■□□□□ 0.83
SEMA4D-220ENST00000492386 SIRT1Q96EB6 747 aa20.25■□□□□ 0.83
SEMA4D-220ENST00000492386 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
SEMA4D-220ENST00000492386 SIRT2Q8IXJ6 389 aa20.24■□□□□ 0.83
SEMA4D-220ENST00000492386 C8orf58Q8NAV2 365 aa20.24■□□□□ 0.83
SEMA4D-220ENST00000492386 NRKQ7Z2Y5 1582 aa20.24■□□□□ 0.83
SEMA4D-220ENST00000492386 ANKRD45Q5TZF3 282 aa20.23■□□□□ 0.83
SEMA4D-220ENST00000492386 CHMP5Q9NZZ3 219 aa20.23■□□□□ 0.83
SEMA4D-220ENST00000492386 NCOA3Q9Y6Q9 1424 aa20.23■□□□□ 0.83
SEMA4D-220ENST00000492386 FAM83GA6ND36 823 aa20.22■□□□□ 0.83
SEMA4D-220ENST00000492386 MCM4P33991 863 aa20.22■□□□□ 0.83
SEMA4D-220ENST00000492386 HSCBQ8IWL3 235 aa20.22■□□□□ 0.83
SEMA4D-220ENST00000492386 PRR36Q9H6K5 1346 aa20.21■□□□□ 0.83
SEMA4D-220ENST00000492386 ZNF692Q9BU19 519 aaPredicted RBP20.21■□□□□ 0.83
SEMA4D-220ENST00000492386 SNX21Q969T3 373 aa20.2■□□□□ 0.82
SEMA4D-220ENST00000492386 API5Q9BZZ5 524 aaKnown RBP20.2■□□□□ 0.82
SEMA4D-220ENST00000492386 DCTN1Q14203 1278 aa20.19■□□□□ 0.82
SEMA4D-220ENST00000492386 DDIT3P35638 169 aa20.19■□□□□ 0.82
SEMA4D-220ENST00000492386 KIF24Q5T7B8 1368 aa20.17■□□□□ 0.82
SEMA4D-220ENST00000492386 KIF2CQ99661 725 aa20.17■□□□□ 0.82
SEMA4D-220ENST00000492386 TOPAZ1Q8N9V7 1692 aa20.17■□□□□ 0.82
SEMA4D-220ENST00000492386 ROBO2Q9HCK4 1378 aa20.16■□□□□ 0.82
SEMA4D-220ENST00000492386 AEBP1Q8IUX7 1158 aa20.16■□□□□ 0.82
SEMA4D-220ENST00000492386 UBR1Q8IWV7 1749 aa20.16■□□□□ 0.82
SEMA4D-220ENST00000492386 EIF4A2Q14240 407 aaKnown RBP20.15■□□□□ 0.82
SEMA4D-220ENST00000492386 TBC1D9Q6ZT07 1266 aa20.15■□□□□ 0.82
SEMA4D-220ENST00000492386 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.15■□□□□ 0.82
SEMA4D-220ENST00000492386 HDGFP51858 240 aaKnown RBP20.15■□□□□ 0.82
SEMA4D-220ENST00000492386 NALCNQ8IZF0 1738 aa20.14■□□□□ 0.81
SEMA4D-220ENST00000492386 L1TD1Q5T7N2 865 aaKnown RBP20.14■□□□□ 0.81
SEMA4D-220ENST00000492386 RGPD1P0DJD0 1748 aa20.13■□□□□ 0.81
SEMA4D-220ENST00000492386 PEAK1Q9H792 1746 aa20.13■□□□□ 0.81
SEMA4D-220ENST00000492386 TMEM2Q9UHN6 1383 aa20.13■□□□□ 0.81
SEMA4D-220ENST00000492386 OVOS2A0A0J9YW53 1432 aa20.13■□□□□ 0.81
SEMA4D-220ENST00000492386 RGS12O14924 1447 aa20.13■□□□□ 0.81
SEMA4D-220ENST00000492386 OVOS2Q6IE36 1432 aa20.13■□□□□ 0.81
SEMA4D-220ENST00000492386 SULT6B1Q6IMI4 303 aa20.13■□□□□ 0.81
SEMA4D-220ENST00000492386 TTC21BQ7Z4L5 1316 aa20.13■□□□□ 0.81
SEMA4D-220ENST00000492386 TNRQ92752 1358 aa20.13■□□□□ 0.81
SEMA4D-220ENST00000492386 ADAMTS13Q76LX8 1427 aa20.13■□□□□ 0.81
SEMA4D-220ENST00000492386 INTS3Q68E01 1043 aaKnown RBP20.12■□□□□ 0.81
SEMA4D-220ENST00000492386 ESF1Q9H501 851 aaKnown RBP20.12■□□□□ 0.81
SEMA4D-220ENST00000492386 FSD2A1L4K1 749 aa20.1■□□□□ 0.81
SEMA4D-220ENST00000492386 CHL1O00533 1208 aa20.1■□□□□ 0.81
SEMA4D-220ENST00000492386 DCTPP1Q9H773 170 aa20.1■□□□□ 0.81
SEMA4D-220ENST00000492386 TRAK2O60296 914 aa20.1■□□□□ 0.81
SEMA4D-220ENST00000492386 KRT24Q2M2I5 525 aa20.1■□□□□ 0.81
SEMA4D-220ENST00000492386 ATP10DQ9P241 1426 aa20.1■□□□□ 0.81
SEMA4D-220ENST00000492386 ACEP12821 1306 aa20.1■□□□□ 0.81
SEMA4D-220ENST00000492386 GSPT1P15170 499 aaKnown RBP20.09■□□□□ 0.81
SEMA4D-220ENST00000492386 PLEKHM2Q8IWE5 1019 aa20.09■□□□□ 0.81
SEMA4D-220ENST00000492386 KIAA0232Q92628 1395 aa20.09■□□□□ 0.81
SEMA4D-220ENST00000492386 CDC45O75419 566 aa20.08■□□□□ 0.81
SEMA4D-220ENST00000492386 CD2BP2O95400 341 aaKnown RBP20.08■□□□□ 0.81
SEMA4D-220ENST00000492386 FAM43AQ8N2R8 423 aa20.08■□□□□ 0.81
SEMA4D-220ENST00000492386 USP6P35125 1406 aa20.08■□□□□ 0.81
SEMA4D-220ENST00000492386 PLEKHG3A1L390 1219 aa20.08■□□□□ 0.8
SEMA4D-220ENST00000492386 MCM10Q7L590 875 aa20.08■□□□□ 0.8
SEMA4D-220ENST00000492386 CIZ1Q9ULV3 898 aaPredicted RBP20.08■□□□□ 0.8
SEMA4D-220ENST00000492386 KIF13AQ9H1H9 1805 aa20.08■□□□□ 0.8
SEMA4D-220ENST00000492386 DDX11L8A8MPP1 907 aa20.07■□□□□ 0.8
SEMA4D-220ENST00000492386 HSP90AB1P08238 724 aaKnown RBP20.07■□□□□ 0.8
SEMA4D-220ENST00000492386 HAP1P54257 671 aaPredicted RBP20.07■□□□□ 0.8
SEMA4D-220ENST00000492386 HSP90AB2PQ58FF8 381 aa20.07■□□□□ 0.8
SEMA4D-220ENST00000492386 ANKRD44Q8N8A2 993 aa20.07■□□□□ 0.8
SEMA4D-220ENST00000492386 GZF1Q9H116 711 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms