RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 PXDNQ92626 1479 aa10.78□□□□□ -0.68
PRPF4B-208ENST00000490653 IFT172Q9UG01 1749 aa10.78□□□□□ -0.68
PRPF4B-208ENST00000490653 USP21Q9UK80 565 aa10.77□□□□□ -0.69
PRPF4B-208ENST00000490653 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.69
PRPF4B-208ENST00000490653 COL22A1Q8NFW1 1626 aaPredicted RBP10.76□□□□□ -0.69
PRPF4B-208ENST00000490653 HRCP23327 699 aa10.76□□□□□ -0.69
PRPF4B-208ENST00000490653 ABCC11Q96J66 1382 aa10.76□□□□□ -0.69
PRPF4B-208ENST00000490653 PIK3C2GO75747 1445 aa10.75□□□□□ -0.69
PRPF4B-208ENST00000490653 XPCQ01831 940 aaPredicted RBP10.75□□□□□ -0.69
PRPF4B-208ENST00000490653 SAFB2Q14151 953 aaKnown RBP eCLIP10.75□□□□□ -0.69
PRPF4B-208ENST00000490653 ESCO1Q5FWF5 840 aa10.75□□□□□ -0.69
PRPF4B-208ENST00000490653 DCAF11Q8TEB1 546 aa10.75□□□□□ -0.69
PRPF4B-208ENST00000490653 ATAD2Q6PL18 1390 aa10.75□□□□□ -0.69
PRPF4B-208ENST00000490653 RNF166Q96A37 237 aaPredicted RBP10.74□□□□□ -0.69
PRPF4B-208ENST00000490653 TRPC5Q9UL62 973 aaPredicted RBP10.74□□□□□ -0.69
PRPF4B-208ENST00000490653 YTHDC2Q9H6S0 1430 aaKnown RBP10.74□□□□□ -0.69
PRPF4B-208ENST00000490653 GLI3P10071 1580 aa10.73□□□□□ -0.69
PRPF4B-208ENST00000490653 FOXO3O43524 673 aa10.73□□□□□ -0.69
PRPF4B-208ENST00000490653 ARSIQ5FYB1 569 aa10.73□□□□□ -0.69
PRPF4B-208ENST00000490653 MFRPQ9BY79 579 aa10.73□□□□□ -0.69
PRPF4B-208ENST00000490653 STK24Q9Y6E0 443 aa10.73□□□□□ -0.69
PRPF4B-208ENST00000490653 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
PRPF4B-208ENST00000490653 DHX57Q6P158 1386 aaKnown RBP10.73□□□□□ -0.69
PRPF4B-208ENST00000490653 NRXN1Q9ULB1 1477 aa10.73□□□□□ -0.69
PRPF4B-208ENST00000490653 SIRT1Q96EB6 747 aa10.72□□□□□ -0.69
PRPF4B-208ENST00000490653 PRAM1Q96QH2 718 aa10.72□□□□□ -0.69
PRPF4B-208ENST00000490653 TRAK1Q9UPV9 953 aa10.72□□□□□ -0.69
PRPF4B-208ENST00000490653 SLIT2O94813 1529 aa10.72□□□□□ -0.69
PRPF4B-208ENST00000490653 TECPR2O15040 1411 aa10.71□□□□□ -0.69
PRPF4B-208ENST00000490653 GJD4Q96KN9 370 aaPredicted RBP10.71□□□□□ -0.69
PRPF4B-208ENST00000490653 CDC42BPGQ6DT37 1551 aa10.7□□□□□ -0.7
PRPF4B-208ENST00000490653 RALGAPBQ86X10 1494 aa10.7□□□□□ -0.7
PRPF4B-208ENST00000490653 DEFB132Q7Z7B7 95 aa10.7□□□□□ -0.7
PRPF4B-208ENST00000490653 KIF3CO14782 793 aa10.69□□□□□ -0.7
PRPF4B-208ENST00000490653 SIN3AQ96ST3 1273 aa10.69□□□□□ -0.7
PRPF4B-208ENST00000490653 HIRIP3Q9BW71 556 aaPredicted RBP10.69□□□□□ -0.7
PRPF4B-208ENST00000490653 RGPD8O14715 1765 aaPredicted RBP10.68□□□□□ -0.7
PRPF4B-208ENST00000490653 MINK1Q8N4C8 1332 aaPredicted RBP10.68□□□□□ -0.7
PRPF4B-208ENST00000490653 ZNF316A6NFI3 1004 aaPredicted RBP10.68□□□□□ -0.7
PRPF4B-208ENST00000490653 PMFBP1Q8TBY8 1022 aa10.68□□□□□ -0.7
PRPF4B-208ENST00000490653 KHSRPQ92945 711 aaKnown RBP eCLIP10.68□□□□□ -0.71e-12■■■■■ 30.8
PRPF4B-208ENST00000490653 POGKQ9P215 609 aa10.68□□□□□ -0.7
PRPF4B-208ENST00000490653 KNDC1Q76NI1 1749 aa10.67□□□□□ -0.7
PRPF4B-208ENST00000490653 SPATA31A3Q5VYP0 1347 aa10.67□□□□□ -0.7
PRPF4B-208ENST00000490653 NPHP3Q7Z494 1330 aa10.67□□□□□ -0.7
PRPF4B-208ENST00000490653 STK25O00506 426 aa10.67□□□□□ -0.7
PRPF4B-208ENST00000490653 PTGER2P43116 358 aa10.67□□□□□ -0.7
PRPF4B-208ENST00000490653 NBPF1Q3BBV0 1214 aa10.67□□□□□ -0.7
PRPF4B-208ENST00000490653 KRT28Q7Z3Y7 464 aa10.67□□□□□ -0.7
PRPF4B-208ENST00000490653 ADGRB1O14514 1584 aa10.66□□□□□ -0.7
PRPF4B-208ENST00000490653 CABLES1Q8TDN4 633 aa10.66□□□□□ -0.7
PRPF4B-208ENST00000490653 PRR36Q9H6K5 1346 aa10.65□□□□□ -0.7
PRPF4B-208ENST00000490653 FMN2Q9NZ56 1722 aa10.65□□□□□ -0.7
PRPF4B-208ENST00000490653 C2orf72A6NCS6 295 aa10.65□□□□□ -0.7
PRPF4B-208ENST00000490653 ONECUT3O60422 494 aaPredicted RBP10.65□□□□□ -0.7
PRPF4B-208ENST00000490653 UNC5CLQ8IV45 518 aa10.65□□□□□ -0.7
PRPF4B-208ENST00000490653 BLMP54132 1417 aaPredicted RBP10.65□□□□□ -0.7
PRPF4B-208ENST00000490653 ECM2O94769 699 aaPredicted RBP10.64□□□□□ -0.71
PRPF4B-208ENST00000490653 CCDC125Q86Z20 511 aa10.64□□□□□ -0.71
PRPF4B-208ENST00000490653 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.64□□□□□ -0.71
PRPF4B-208ENST00000490653 MARF1Q9Y4F3 1742 aaKnown RBP10.64□□□□□ -0.71
PRPF4B-208ENST00000490653 NEUROD1Q13562 356 aa10.63□□□□□ -0.71
PRPF4B-208ENST00000490653 SEPT12Q8IYM1 358 aa10.63□□□□□ -0.71
PRPF4B-208ENST00000490653 L3MBTL2Q969R5 705 aa10.63□□□□□ -0.71
PRPF4B-208ENST00000490653 BRWD3Q6RI45 1802 aa10.63□□□□□ -0.71
PRPF4B-208ENST00000490653 USP32Q8NFA0 1604 aa10.62□□□□□ -0.71
PRPF4B-208ENST00000490653 WASLO00401 505 aaPredicted RBP10.62□□□□□ -0.71
PRPF4B-208ENST00000490653 DLC1Q96QB1 1528 aa10.62□□□□□ -0.71
PRPF4B-208ENST00000490653 FAM83GA6ND36 823 aa10.61□□□□□ -0.71
PRPF4B-208ENST00000490653 PSME1Q06323 249 aa10.61□□□□□ -0.71
PRPF4B-208ENST00000490653 VPS72Q15906 364 aa10.61□□□□□ -0.71
PRPF4B-208ENST00000490653 LMOD2Q6P5Q4 547 aa10.61□□□□□ -0.71
PRPF4B-208ENST00000490653 STAC3Q96MF2 364 aa10.61□□□□□ -0.71
PRPF4B-208ENST00000490653 SLC34A2O95436 690 aa10.6□□□□□ -0.71
PRPF4B-208ENST00000490653 LSM11P83369 360 aaKnown RBP eCLIP10.6□□□□□ -0.71
PRPF4B-208ENST00000490653 CDK19Q9BWU1 502 aa10.6□□□□□ -0.71
PRPF4B-208ENST00000490653 TNS3Q68CZ2 1445 aa10.59□□□□□ -0.71
PRPF4B-208ENST00000490653 PSDA5PKW4 1024 aaPredicted RBP10.59□□□□□ -0.71
PRPF4B-208ENST00000490653 RGL2O15211 777 aa10.59□□□□□ -0.71
PRPF4B-208ENST00000490653 FAM182BQ5T319 152 aa10.59□□□□□ -0.71
PRPF4B-208ENST00000490653 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
PRPF4B-208ENST00000490653 NUDT16Q96DE0 195 aaKnown RBP10.59□□□□□ -0.71
PRPF4B-208ENST00000490653 LRP5O75197 1615 aa10.58□□□□□ -0.72
PRPF4B-208ENST00000490653 ABCA3Q99758 1704 aa10.58□□□□□ -0.72
PRPF4B-208ENST00000490653 NUDT7P0C024 238 aa10.58□□□□□ -0.72
PRPF4B-208ENST00000490653 NBPF8Q3BBV2 869 aa10.58□□□□□ -0.72
PRPF4B-208ENST00000490653 PBX2P40425 430 aa10.57□□□□□ -0.72
PRPF4B-208ENST00000490653 PLCH1Q4KWH8 1693 aa10.57□□□□□ -0.72
PRPF4B-208ENST00000490653 NRAPQ86VF7 1730 aa10.56□□□□□ -0.72
PRPF4B-208ENST00000490653 SBNO1A3KN83 1393 aa10.56□□□□□ -0.72
PRPF4B-208ENST00000490653 KRT27Q7Z3Y8 459 aa10.56□□□□□ -0.72
PRPF4B-208ENST00000490653 NGDNQ8NEJ9 315 aaKnown RBP10.56□□□□□ -0.72
PRPF4B-208ENST00000490653 PCDHGA4Q9Y5G9 962 aa10.56□□□□□ -0.72
PRPF4B-208ENST00000490653 KIF1AQ12756 1690 aa10.56□□□□□ -0.72
PRPF4B-208ENST00000490653 ARHGEF28Q8N1W1 1705 aaKnown RBP10.55□□□□□ -0.72
PRPF4B-208ENST00000490653 NUTM2GQ5VZR2 741 aa10.55□□□□□ -0.72
PRPF4B-208ENST00000490653 TMC2Q8TDI7 906 aa10.55□□□□□ -0.72
PRPF4B-208ENST00000490653 LHX6Q9UPM6 363 aa10.55□□□□□ -0.72
PRPF4B-208ENST00000490653 ANKARQ7Z5J8 1434 aa10.55□□□□□ -0.72
PRPF4B-208ENST00000490653 ADGRB2O60241 1585 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms