RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 NGDNQ8NEJ9 315 aaKnown RBP29.19■■■□□ 2.26
LRRC1-203ENST00000487251 DNAJC5Q9H3Z4 198 aa29.19■■■□□ 2.26
LRRC1-203ENST00000487251 LAS1LQ9Y4W2 734 aaKnown RBP29.19■■■□□ 2.26
LRRC1-203ENST00000487251 IGHDP01880 384 aa29.18■■■□□ 2.26
LRRC1-203ENST00000487251 PDE4AP27815 886 aa29.18■■■□□ 2.26
LRRC1-203ENST00000487251 EIF4A2Q14240 407 aaKnown RBP29.17■■■□□ 2.26
LRRC1-203ENST00000487251 ZNF142P52746 1687 aaPredicted RBP29.17■■■□□ 2.26
LRRC1-203ENST00000487251 ANP32AP39687 249 aaKnown RBP29.17■■■□□ 2.26
LRRC1-203ENST00000487251 AEBP1Q8IUX7 1158 aa29.17■■■□□ 2.26
LRRC1-203ENST00000487251 SSH1Q8WYL5 1049 aa29.16■■■□□ 2.26
LRRC1-203ENST00000487251 SMC4Q9NTJ3 1288 aa29.16■■■□□ 2.26
LRRC1-203ENST00000487251 CHD2O14647 1828 aaKnown RBP29.16■■■□□ 2.26
LRRC1-203ENST00000487251 HSP90AB2PQ58FF8 381 aa29.15■■■□□ 2.26
LRRC1-203ENST00000487251 MS4A1P11836 297 aa29.15■■■□□ 2.26
LRRC1-203ENST00000487251 ANKLE2Q86XL3 938 aa29.15■■■□□ 2.26
LRRC1-203ENST00000487251 FMN2Q9NZ56 1722 aa29.14■■■□□ 2.26
LRRC1-203ENST00000487251 PIK3C2AO00443 1686 aa29.13■■■□□ 2.25
LRRC1-203ENST00000487251 BACH2Q9BYV9 841 aa29.13■■■□□ 2.25
LRRC1-203ENST00000487251 CT47B1P0C2W7 299 aaPredicted RBP29.12■■■□□ 2.25
LRRC1-203ENST00000487251 USP31Q70CQ4 1352 aa29.12■■■□□ 2.25
LRRC1-203ENST00000487251 FAM83GA6ND36 823 aa29.12■■■□□ 2.25
LRRC1-203ENST00000487251 SETD1BQ9UPS6 1966 aaKnown RBP29.11■■■□□ 2.25
LRRC1-203ENST00000487251 SULT6B1Q6IMI4 303 aa29.11■■■□□ 2.25
LRRC1-203ENST00000487251 PIK3R4Q99570 1358 aa29.11■■■□□ 2.25
LRRC1-203ENST00000487251 ZKSCAN2Q63HK3 967 aa29.11■■■□□ 2.25
LRRC1-203ENST00000487251 TTC21AQ8NDW8 1320 aa29.1■■■□□ 2.25
LRRC1-203ENST00000487251 RGS3P49796 1198 aa29.09■■■□□ 2.25
LRRC1-203ENST00000487251 DCTN1Q14203 1278 aa29.09■■■□□ 2.25
LRRC1-203ENST00000487251 NUTM2GQ5VZR2 741 aa29.09■■■□□ 2.25
LRRC1-203ENST00000487251 ZBTB47Q9UFB7 747 aaPredicted RBP29.09■■■□□ 2.25
LRRC1-203ENST00000487251 MAP3K19Q56UN5 1328 aa29.08■■■□□ 2.25
LRRC1-203ENST00000487251 PCDHB15Q9Y5E8 787 aa29.08■■■□□ 2.24
LRRC1-203ENST00000487251 TRIM27P14373 513 aa29.07■■■□□ 2.24
LRRC1-203ENST00000487251 NOB1Q9ULX3 412 aaKnown RBP29.07■■■□□ 2.24
LRRC1-203ENST00000487251 NPM2Q86SE8 214 aaKnown RBP29.06■■■□□ 2.24
LRRC1-203ENST00000487251 DZIP1LQ8IYY4 767 aaKnown RBP29.06■■■□□ 2.24
LRRC1-203ENST00000487251 RGPD1P0DJD0 1748 aa29.06■■■□□ 2.24
LRRC1-203ENST00000487251 ANKARQ7Z5J8 1434 aa29.06■■■□□ 2.24
LRRC1-203ENST00000487251 FTSJ3Q8IY81 847 aaKnown RBP29.05■■■□□ 2.24
LRRC1-203ENST00000487251 MVPQ14764 893 aaKnown RBP29.04■■■□□ 2.24
LRRC1-203ENST00000487251 RTL5Q5HYW3 569 aaPredicted RBP29.04■■■□□ 2.24
LRRC1-203ENST00000487251 MARF1Q9Y4F3 1742 aaKnown RBP29.04■■■□□ 2.24
LRRC1-203ENST00000487251 TSPYL6Q8N831 410 aa29.03■■■□□ 2.24
LRRC1-203ENST00000487251 MBIPQ9NS73 344 aa29.03■■■□□ 2.24
LRRC1-203ENST00000487251 NLRP6P59044 892 aa29.02■■■□□ 2.24
LRRC1-203ENST00000487251 ELL2O00472 640 aaPredicted RBP29.01■■■□□ 2.24
LRRC1-203ENST00000487251 ZNF853P0CG23 659 aa29■■■□□ 2.23
LRRC1-203ENST00000487251 ATF7IPQ6VMQ6 1270 aa29■■■□□ 2.23
LRRC1-203ENST00000487251 IFT57Q9NWB7 429 aa29■■■□□ 2.23
LRRC1-203ENST00000487251 PRKCSHP14314 528 aaPredicted RBP28.99■■■□□ 2.23
LRRC1-203ENST00000487251 GNAI1P63096 354 aa28.99■■■□□ 2.23
LRRC1-203ENST00000487251 CALD1Q05682 793 aaKnown RBP28.97■■■□□ 2.23
LRRC1-203ENST00000487251 SBNO1A3KN83 1393 aa28.97■■■□□ 2.23
LRRC1-203ENST00000487251 VAMP4O75379 141 aa28.97■■■□□ 2.23
LRRC1-203ENST00000487251 LMOD3Q0VAK6 560 aa28.96■■■□□ 2.23
LRRC1-203ENST00000487251 ITPRIPQ8IWB1 547 aa28.96■■■□□ 2.23
LRRC1-203ENST00000487251 FLT4P35916 1363 aa28.96■■■□□ 2.23
LRRC1-203ENST00000487251 AMPHP49418 695 aa28.96■■■□□ 2.23
LRRC1-203ENST00000487251 TMEM57Q8N5G2 664 aa28.95■■■□□ 2.23
LRRC1-203ENST00000487251 ABTB2Q8N961 1025 aa28.95■■■□□ 2.23
LRRC1-203ENST00000487251 ALDH1L2Q3SY69 923 aa28.95■■■□□ 2.22
LRRC1-203ENST00000487251 C14orf37Q86TY3 774 aa28.95■■■□□ 2.22
LRRC1-203ENST00000487251 CFAP44Q96MT7 982 aa28.95■■■□□ 2.22
LRRC1-203ENST00000487251 NPHP4O75161 1426 aaPredicted RBP28.95■■■□□ 2.22
LRRC1-203ENST00000487251 MCM10Q7L590 875 aa28.94■■■□□ 2.22
LRRC1-203ENST00000487251 PHF8Q9UPP1 1060 aa28.94■■■□□ 2.22
LRRC1-203ENST00000487251 C8orf58Q8NAV2 365 aa28.94■■■□□ 2.22
LRRC1-203ENST00000487251 ANO8Q9HCE9 1232 aaPredicted RBP28.94■■■□□ 2.22
LRRC1-203ENST00000487251 KIF16BQ96L93 1317 aa28.93■■■□□ 2.22
LRRC1-203ENST00000487251 AAMPQ13685 434 aa28.92■■■□□ 2.22
LRRC1-203ENST00000487251 C8orf34Q49A92 452 aa28.92■■■□□ 2.22
LRRC1-203ENST00000487251 FOXO3O43524 673 aa28.91■■■□□ 2.22
LRRC1-203ENST00000487251 EYA1Q99502 592 aa28.9■■■□□ 2.22
LRRC1-203ENST00000487251 ARHGEF10O15013 1369 aa28.9■■■□□ 2.22
LRRC1-203ENST00000487251 TWISTNBQ3B726 338 aaPredicted RBP28.9■■■□□ 2.22
LRRC1-203ENST00000487251 ADGRL3Q9HAR2 1447 aa28.9■■■□□ 2.22
LRRC1-203ENST00000487251 MRPL50Q8N5N7 158 aaKnown RBP28.89■■■□□ 2.22
LRRC1-203ENST00000487251 IL27Q8NEV9 243 aa28.89■■■□□ 2.22
LRRC1-203ENST00000487251 ESCO1Q5FWF5 840 aa28.89■■■□□ 2.22
LRRC1-203ENST00000487251 IPO8O15397 1037 aaKnown RBP28.88■■■□□ 2.21
LRRC1-203ENST00000487251 KRT24Q2M2I5 525 aa28.88■■■□□ 2.21
LRRC1-203ENST00000487251 FAM161AQ3B820 660 aa28.88■■■□□ 2.21
LRRC1-203ENST00000487251 DDX19BQ9UMR2 479 aa28.88■■■□□ 2.21
LRRC1-203ENST00000487251 USP54Q70EL1 1684 aa28.88■■■□□ 2.21
LRRC1-203ENST00000487251 HOXC9P31274 260 aa28.86■■■□□ 2.21
LRRC1-203ENST00000487251 MTHFSDQ2M296 383 aaKnown RBP28.86■■■□□ 2.21
LRRC1-203ENST00000487251 LTN1O94822 1766 aa28.85■■■□□ 2.21
LRRC1-203ENST00000487251 LTV1Q96GA3 475 aaPredicted RBP28.85■■■□□ 2.21
LRRC1-203ENST00000487251 ZNF428Q96B54 188 aa28.85■■■□□ 2.21
LRRC1-203ENST00000487251 RWDD1Q9H446 243 aaPredicted RBP28.85■■■□□ 2.21
LRRC1-203ENST00000487251 IGSF1Q8N6C5 1336 aa28.85■■■□□ 2.21
LRRC1-203ENST00000487251 PDZRN3Q9UPQ7 1066 aa28.84■■■□□ 2.21
LRRC1-203ENST00000487251 BRPF1P55201 1214 aaPredicted RBP28.83■■■□□ 2.21
LRRC1-203ENST00000487251 KDRP35968 1356 aa28.83■■■□□ 2.21
LRRC1-203ENST00000487251 ORAI2Q96SN7 254 aa28.82■■■□□ 2.2
LRRC1-203ENST00000487251 XPCQ01831 940 aaPredicted RBP28.81■■■□□ 2.2
LRRC1-203ENST00000487251 MIS18AQ9NYP9 233 aa28.81■■■□□ 2.2
LRRC1-203ENST00000487251 VIRMAQ69YN4 1812 aaKnown RBP28.81■■■□□ 2.2
LRRC1-203ENST00000487251 PLEKHG5O94827 1062 aa28.81■■■□□ 2.2
LRRC1-203ENST00000487251 PSME1Q06323 249 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms