RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 EMILIN1Q9Y6C2 1016 aa9.27□□□□□ -0.93
SF3A3-206ENST00000487062 MAPK8IP3Q9UPT6 1336 aa9.27□□□□□ -0.93
SF3A3-206ENST00000487062 MSH6P52701 1360 aa9.26□□□□□ -0.93
SF3A3-206ENST00000487062 MARF1Q9Y4F3 1742 aaKnown RBP9.26□□□□□ -0.93
SF3A3-206ENST00000487062 PAK3O75914 559 aaPredicted RBP9.26□□□□□ -0.93
SF3A3-206ENST00000487062 NLRP6P59044 892 aa9.26□□□□□ -0.93
SF3A3-206ENST00000487062 CADPS2Q86UW7 1296 aa9.26□□□□□ -0.93
SF3A3-206ENST00000487062 ABTB2Q8N961 1025 aa9.26□□□□□ -0.93
SF3A3-206ENST00000487062 IQSEC2Q5JU85 1478 aa9.26□□□□□ -0.93
SF3A3-206ENST00000487062 C1orf167Q5SNV9 1468 aa9.26□□□□□ -0.93
SF3A3-206ENST00000487062 FCHSD2O94868 740 aa9.25□□□□□ -0.93
SF3A3-206ENST00000487062 RRS1Q15050 365 aaKnown RBP9.25□□□□□ -0.93
SF3A3-206ENST00000487062 TCP11L2Q8N4U5 519 aa9.25□□□□□ -0.93
SF3A3-206ENST00000487062 TSHZ2Q9NRE2 1034 aa9.25□□□□□ -0.93
SF3A3-206ENST00000487062 ZNF521Q96K83 1311 aa9.25□□□□□ -0.93
SF3A3-206ENST00000487062 KIF24Q5T7B8 1368 aa9.24□□□□□ -0.93
SF3A3-206ENST00000487062 MST1RQ04912 1400 aa9.24□□□□□ -0.93
SF3A3-206ENST00000487062 FBLN1P23142 703 aa9.24□□□□□ -0.93
SF3A3-206ENST00000487062 CCDC27Q2M243 656 aa9.24□□□□□ -0.93
SF3A3-206ENST00000487062 ERICH6BQ5W0A0 696 aa9.24□□□□□ -0.93
SF3A3-206ENST00000487062 ORAI2Q96SN7 254 aa9.24□□□□□ -0.93
SF3A3-206ENST00000487062 TRPM3Q9HCF6 1732 aaPredicted RBP9.24□□□□□ -0.93
SF3A3-206ENST00000487062 LTN1O94822 1766 aa9.24□□□□□ -0.93
SF3A3-206ENST00000487062 SBNO1A3KN83 1393 aa9.24□□□□□ -0.93
SF3A3-206ENST00000487062 FLT4P35916 1363 aa9.24□□□□□ -0.93
SF3A3-206ENST00000487062 PEAK1Q9H792 1746 aa9.23□□□□□ -0.93
SF3A3-206ENST00000487062 E9PSI1 815 aa9.23□□□□□ -0.93
SF3A3-206ENST00000487062 RGL2O15211 777 aa9.23□□□□□ -0.93
SF3A3-206ENST00000487062 IL13P35225 146 aa9.23□□□□□ -0.93
SF3A3-206ENST00000487062 AMPHP49418 695 aa9.23□□□□□ -0.93
SF3A3-206ENST00000487062 WDR63Q8IWG1 891 aa9.23□□□□□ -0.93
SF3A3-206ENST00000487062 CDCA7LQ96GN5 454 aa9.23□□□□□ -0.93
SF3A3-206ENST00000487062 SLFN5Q08AF3 891 aa9.22□□□□□ -0.93
SF3A3-206ENST00000487062 NEUROD2Q15784 382 aa9.22□□□□□ -0.93
SF3A3-206ENST00000487062 KRT28Q7Z3Y7 464 aa9.22□□□□□ -0.93
SF3A3-206ENST00000487062 WWC1Q8IX03 1113 aa9.22□□□□□ -0.93
SF3A3-206ENST00000487062 SPRYD3Q8NCJ5 442 aa9.22□□□□□ -0.93
SF3A3-206ENST00000487062 KCNH5Q8NCM2 988 aa9.22□□□□□ -0.93
SF3A3-206ENST00000487062 PLEKHF1Q96S99 279 aa9.22□□□□□ -0.93
SF3A3-206ENST00000487062 RCAN3Q9UKA8 241 aa9.22□□□□□ -0.93
SF3A3-206ENST00000487062 MAP3K19Q56UN5 1328 aa9.22□□□□□ -0.93
SF3A3-206ENST00000487062 ALS2Q96Q42 1657 aa9.21□□□□□ -0.93
SF3A3-206ENST00000487062 SOX12O15370 315 aa9.21□□□□□ -0.94
SF3A3-206ENST00000487062 FOXO3O43524 673 aa9.21□□□□□ -0.94
SF3A3-206ENST00000487062 TMPOP42166 694 aaKnown RBP9.21□□□□□ -0.94
SF3A3-206ENST00000487062 NUTM2GQ5VZR2 741 aa9.21□□□□□ -0.94
SF3A3-206ENST00000487062 RSPH6AQ9H0K4 717 aa9.21□□□□□ -0.94
SF3A3-206ENST00000487062 RGPD1P0DJD0 1748 aa9.21□□□□□ -0.94
SF3A3-206ENST00000487062 NPHP3Q7Z494 1330 aa9.21□□□□□ -0.94
SF3A3-206ENST00000487062 RTL1A6NKG5 1358 aa9.21□□□□□ -0.94
SF3A3-206ENST00000487062 PHRF1Q9P1Y6 1649 aaKnown RBP9.2□□□□□ -0.94
SF3A3-206ENST00000487062 PRKAR2BP31323 418 aa9.2□□□□□ -0.94
SF3A3-206ENST00000487062 POLA2Q14181 598 aa9.2□□□□□ -0.94
SF3A3-206ENST00000487062 EIF4A2Q14240 407 aaKnown RBP9.2□□□□□ -0.94
SF3A3-206ENST00000487062 DUSP27Q5VZP5 1158 aa9.2□□□□□ -0.94
SF3A3-206ENST00000487062 TRMT2AQ8IZ69 625 aaKnown RBP9.2□□□□□ -0.94
SF3A3-206ENST00000487062 RRP7AQ9Y3A4 280 aaKnown RBP9.2□□□□□ -0.94
SF3A3-206ENST00000487062 RNF123Q5XPI4 1314 aa9.2□□□□□ -0.94
SF3A3-206ENST00000487062 ZNF335Q9H4Z2 1342 aaPredicted RBP9.2□□□□□ -0.94
SF3A3-206ENST00000487062 SLIT3O75094 1523 aa9.2□□□□□ -0.94
SF3A3-206ENST00000487062 DLG5Q8TDM6 1919 aa9.19□□□□□ -0.94
SF3A3-206ENST00000487062 HMOX1P09601 288 aa9.19□□□□□ -0.94
SF3A3-206ENST00000487062 RIPK4P57078 832 aa9.19□□□□□ -0.94
SF3A3-206ENST00000487062 LMOD3Q0VAK6 560 aa9.19□□□□□ -0.94
SF3A3-206ENST00000487062 HSP90AB2PQ58FF8 381 aa9.19□□□□□ -0.94
SF3A3-206ENST00000487062 LMOD2Q6P5Q4 547 aa9.19□□□□□ -0.94
SF3A3-206ENST00000487062 KLHL34Q8N239 644 aa9.19□□□□□ -0.94
SF3A3-206ENST00000487062 MYH16Q9H6N6 1097 aa9.19□□□□□ -0.94
SF3A3-206ENST00000487062 ARHGEF10O15013 1369 aa9.19□□□□□ -0.94
SF3A3-206ENST00000487062 NFAT5O94916 1531 aa9.19□□□□□ -0.94
SF3A3-206ENST00000487062 HOXC9P31274 260 aa9.18□□□□□ -0.94
SF3A3-206ENST00000487062 CALD1Q05682 793 aaKnown RBP9.18□□□□□ -0.94
SF3A3-206ENST00000487062 IL16Q14005 1332 aa9.18□□□□□ -0.94
SF3A3-206ENST00000487062 NFE2L2Q16236 605 aa9.18□□□□□ -0.94
SF3A3-206ENST00000487062 USP19O94966 1318 aa9.17□□□□□ -0.94
SF3A3-206ENST00000487062 RRP1P56182 461 aaKnown RBP9.17□□□□□ -0.94
SF3A3-206ENST00000487062 IRX6P78412 446 aaPredicted RBP9.17□□□□□ -0.94
SF3A3-206ENST00000487062 XPCQ01831 940 aaPredicted RBP9.17□□□□□ -0.94
SF3A3-206ENST00000487062 SULT6B1Q6IMI4 303 aa9.17□□□□□ -0.94
SF3A3-206ENST00000487062 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.17□□□□□ -0.94
SF3A3-206ENST00000487062 IP6K1Q92551 441 aa9.17□□□□□ -0.94
SF3A3-206ENST00000487062 TNS3Q68CZ2 1445 aa9.16□□□□□ -0.94
SF3A3-206ENST00000487062 SLAIN2Q9P270 581 aa9.16□□□□□ -0.94
SF3A3-206ENST00000487062 TRIM35Q9UPQ4 493 aa9.16□□□□□ -0.94
SF3A3-206ENST00000487062 PXDNQ92626 1479 aa9.15□□□□□ -0.94
SF3A3-206ENST00000487062 IGSF1Q8N6C5 1336 aa9.15□□□□□ -0.94
SF3A3-206ENST00000487062 GCP02774 474 aa9.15□□□□□ -0.94
SF3A3-206ENST00000487062 CT47B1P0C2W7 299 aaPredicted RBP9.15□□□□□ -0.94
SF3A3-206ENST00000487062 SPINK5Q9NQ38 1064 aaPredicted RBP9.15□□□□□ -0.94
SF3A3-206ENST00000487062 PPP4R2Q9NY27 417 aa9.15□□□□□ -0.94
SF3A3-206ENST00000487062 KDRP35968 1356 aa9.14□□□□□ -0.95
SF3A3-206ENST00000487062 NHSL1Q5SYE7 1610 aa9.14□□□□□ -0.95
SF3A3-206ENST00000487062 ZBTB7CA1YPR0 619 aa9.14□□□□□ -0.95
SF3A3-206ENST00000487062 BRINP3Q76B58 766 aa9.14□□□□□ -0.95
SF3A3-206ENST00000487062 ARHGEF25Q86VW2 580 aa9.14□□□□□ -0.95
SF3A3-206ENST00000487062 PHACTR3Q96KR7 559 aa9.14□□□□□ -0.95
SF3A3-206ENST00000487062 MED1Q15648 1581 aaPredicted RBP9.14□□□□□ -0.95
SF3A3-206ENST00000487062 CRYBG1Q9Y4K1 1723 aa9.14□□□□□ -0.95
SF3A3-206ENST00000487062 SPATA31A3Q5VYP0 1347 aa9.13□□□□□ -0.95
SF3A3-206ENST00000487062 GNAI1P63096 354 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms