RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 HMOX1P09601 288 aa24.78■■□□□ 1.56
LIMS2-215ENST00000484252 ZNF853P0CG23 659 aa24.78■■□□□ 1.56
LIMS2-215ENST00000484252 MON2Q7Z3U7 1717 aa24.78■■□□□ 1.56
LIMS2-215ENST00000484252 TECPR2O15040 1411 aa24.78■■□□□ 1.56
LIMS2-215ENST00000484252 MFAP1P55081 439 aaKnown RBP24.77■■□□□ 1.56
LIMS2-215ENST00000484252 EMILIN1Q9Y6C2 1016 aa24.77■■□□□ 1.56
LIMS2-215ENST00000484252 FBLN1P23142 703 aa24.77■■□□□ 1.56
LIMS2-215ENST00000484252 UBE2Q2Q8WVN8 375 aa24.77■■□□□ 1.56
LIMS2-215ENST00000484252 RTN4Q9NQC3 1192 aaKnown RBP24.77■■□□□ 1.56
LIMS2-215ENST00000484252 HDGFP51858 240 aaKnown RBP24.76■■□□□ 1.55
LIMS2-215ENST00000484252 CHD1LQ86WJ1 897 aa24.76■■□□□ 1.55
LIMS2-215ENST00000484252 NME9Q86XW9 330 aa24.76■■□□□ 1.55
LIMS2-215ENST00000484252 GCC1Q96CN9 775 aa24.76■■□□□ 1.55
LIMS2-215ENST00000484252 COG3Q96JB2 828 aa24.76■■□□□ 1.55
LIMS2-215ENST00000484252 ZBTB7BO15156 539 aaPredicted RBP24.76■■□□□ 1.55
LIMS2-215ENST00000484252 METP08581 1390 aa24.76■■□□□ 1.55
LIMS2-215ENST00000484252 NUDT16Q96DE0 195 aaKnown RBP24.75■■□□□ 1.55
LIMS2-215ENST00000484252 CCDC61Q9Y6R9 512 aa24.75■■□□□ 1.55
LIMS2-215ENST00000484252 CPS1P31327 1500 aa24.74■■□□□ 1.55
LIMS2-215ENST00000484252 CFAP44Q96MT7 982 aa24.73■■□□□ 1.55
LIMS2-215ENST00000484252 ABCC4O15439 1325 aa24.73■■□□□ 1.55
LIMS2-215ENST00000484252 MLECQ14165 292 aa24.73■■□□□ 1.55
LIMS2-215ENST00000484252 ZNF692Q9BU19 519 aaPredicted RBP24.73■■□□□ 1.55
LIMS2-215ENST00000484252 MBIPQ9NS73 344 aa24.73■■□□□ 1.55
LIMS2-215ENST00000484252 AKAP12Q02952 1782 aa24.72■■□□□ 1.55
LIMS2-215ENST00000484252 C3P01024 1663 aa24.71■■□□□ 1.55
LIMS2-215ENST00000484252 KIF13AQ9H1H9 1805 aa24.71■■□□□ 1.55
LIMS2-215ENST00000484252 BMP2KLQ5H9B9 411 aa24.71■■□□□ 1.55
LIMS2-215ENST00000484252 THUMPD2Q9BTF0 503 aaKnown RBP24.71■■□□□ 1.55
LIMS2-215ENST00000484252 BRPF3Q9ULD4 1205 aa24.71■■□□□ 1.55
LIMS2-215ENST00000484252 RBM25P49756 843 aaKnown RBP24.71■■□□□ 1.55
LIMS2-215ENST00000484252 LNPKQ9C0E8 428 aa24.71■■□□□ 1.55
LIMS2-215ENST00000484252 ITSN1Q15811 1721 aa24.71■■□□□ 1.55
LIMS2-215ENST00000484252 TXNDC2Q86VQ3 553 aa24.7■■□□□ 1.54
LIMS2-215ENST00000484252 TSPYL6Q8N831 410 aa24.7■■□□□ 1.54
LIMS2-215ENST00000484252 API5Q9BZZ5 524 aaKnown RBP24.7■■□□□ 1.54
LIMS2-215ENST00000484252 KIF24Q5T7B8 1368 aa24.7■■□□□ 1.54
LIMS2-215ENST00000484252 TWISTNBQ3B726 338 aaPredicted RBP24.7■■□□□ 1.54
LIMS2-215ENST00000484252 CHMP5Q9NZZ3 219 aa24.7■■□□□ 1.54
LIMS2-215ENST00000484252 HSCBQ8IWL3 235 aa24.68■■□□□ 1.54
LIMS2-215ENST00000484252 NRKQ7Z2Y5 1582 aa24.68■■□□□ 1.54
LIMS2-215ENST00000484252 ZRANB1Q9UGI0 708 aa24.68■■□□□ 1.54
LIMS2-215ENST00000484252 DLG5Q8TDM6 1919 aa24.67■■□□□ 1.54
LIMS2-215ENST00000484252 ESF1Q9H501 851 aaKnown RBP24.66■■□□□ 1.54
LIMS2-215ENST00000484252 SNX21Q969T3 373 aa24.66■■□□□ 1.54
LIMS2-215ENST00000484252 ANKRD45Q5TZF3 282 aa24.65■■□□□ 1.54
LIMS2-215ENST00000484252 HAP1P54257 671 aaPredicted RBP24.65■■□□□ 1.54
LIMS2-215ENST00000484252 RRS1Q15050 365 aaKnown RBP24.64■■□□□ 1.53
LIMS2-215ENST00000484252 C8orf58Q8NAV2 365 aa24.63■■□□□ 1.53
LIMS2-215ENST00000484252 NCOA3Q9Y6Q9 1424 aa24.62■■□□□ 1.53
LIMS2-215ENST00000484252 MCM4P33991 863 aa24.62■■□□□ 1.53
LIMS2-215ENST00000484252 L1TD1Q5T7N2 865 aaKnown RBP24.62■■□□□ 1.53
LIMS2-215ENST00000484252 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.62■■□□□ 1.53
LIMS2-215ENST00000484252 TNRQ92752 1358 aa24.61■■□□□ 1.53
LIMS2-215ENST00000484252 ELL2O00472 640 aaPredicted RBP24.61■■□□□ 1.53
LIMS2-215ENST00000484252 EIF5BO60841 1220 aaKnown RBP24.61■■□□□ 1.53
LIMS2-215ENST00000484252 PRR36Q9H6K5 1346 aa24.6■■□□□ 1.53
LIMS2-215ENST00000484252 TMEM2Q9UHN6 1383 aa24.6■■□□□ 1.53
LIMS2-215ENST00000484252 NCKAP5LQ9HCH0 1330 aa24.6■■□□□ 1.53
LIMS2-215ENST00000484252 SIRT2Q8IXJ6 389 aa24.6■■□□□ 1.53
LIMS2-215ENST00000484252 C1orf115Q9H7X2 142 aa24.6■■□□□ 1.53
LIMS2-215ENST00000484252 SPRYD3Q8NCJ5 442 aa24.59■■□□□ 1.53
LIMS2-215ENST00000484252 TTC21BQ7Z4L5 1316 aa24.57■■□□□ 1.52
LIMS2-215ENST00000484252 FAM83GA6ND36 823 aa24.57■■□□□ 1.52
LIMS2-215ENST00000484252 TOPAZ1Q8N9V7 1692 aa24.56■■□□□ 1.52
LIMS2-215ENST00000484252 UBR1Q8IWV7 1749 aa24.56■■□□□ 1.52
LIMS2-215ENST00000484252 EIF4A2Q14240 407 aaKnown RBP24.56■■□□□ 1.52
LIMS2-215ENST00000484252 OVOS2A0A0J9YW53 1432 aa24.56■■□□□ 1.52
LIMS2-215ENST00000484252 OVOS2Q6IE36 1432 aa24.56■■□□□ 1.52
LIMS2-215ENST00000484252 ROBO2Q9HCK4 1378 aa24.56■■□□□ 1.52
LIMS2-215ENST00000484252 INTS3Q68E01 1043 aaKnown RBP24.55■■□□□ 1.52
LIMS2-215ENST00000484252 KIAA0232Q92628 1395 aa24.55■■□□□ 1.52
LIMS2-215ENST00000484252 PLEKHG3A1L390 1219 aa24.55■■□□□ 1.52
LIMS2-215ENST00000484252 DDIT3P35638 169 aa24.55■■□□□ 1.52
LIMS2-215ENST00000484252 CIZ1Q9ULV3 898 aaPredicted RBP24.55■■□□□ 1.52
LIMS2-215ENST00000484252 ADAMTS13Q76LX8 1427 aa24.54■■□□□ 1.52
LIMS2-215ENST00000484252 SULT6B1Q6IMI4 303 aa24.54■■□□□ 1.52
LIMS2-215ENST00000484252 DDX11L8A8MPP1 907 aa24.53■■□□□ 1.52
LIMS2-215ENST00000484252 CHL1O00533 1208 aa24.53■■□□□ 1.52
LIMS2-215ENST00000484252 DCTN1Q14203 1278 aa24.53■■□□□ 1.52
LIMS2-215ENST00000484252 TBC1D9Q6ZT07 1266 aa24.53■■□□□ 1.52
LIMS2-215ENST00000484252 NALCNQ8IZF0 1738 aa24.52■■□□□ 1.52
LIMS2-215ENST00000484252 CDC45O75419 566 aa24.52■■□□□ 1.52
LIMS2-215ENST00000484252 DCTPP1Q9H773 170 aa24.52■■□□□ 1.52
LIMS2-215ENST00000484252 USP6P35125 1406 aa24.51■■□□□ 1.51
LIMS2-215ENST00000484252 ACEP12821 1306 aa24.51■■□□□ 1.51
LIMS2-215ENST00000484252 USP31Q70CQ4 1352 aa24.51■■□□□ 1.51
LIMS2-215ENST00000484252 PLEKHG1Q9ULL1 1385 aa24.51■■□□□ 1.51
LIMS2-215ENST00000484252 RGPD1P0DJD0 1748 aa24.5■■□□□ 1.51
LIMS2-215ENST00000484252 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.5■■□□□ 1.51
LIMS2-215ENST00000484252 HSP90AB1P08238 724 aaKnown RBP24.5■■□□□ 1.51
LIMS2-215ENST00000484252 AEBP1Q8IUX7 1158 aa24.5■■□□□ 1.51
LIMS2-215ENST00000484252 PTPRCP08575 1304 aa24.5■■□□□ 1.51
LIMS2-215ENST00000484252 KIF2CQ99661 725 aa24.49■■□□□ 1.51
LIMS2-215ENST00000484252 RPAP2Q8IXW5 612 aaPredicted RBP24.49■■□□□ 1.51
LIMS2-215ENST00000484252 FAM43AQ8N2R8 423 aa24.48■■□□□ 1.51
LIMS2-215ENST00000484252 ANKRD44Q8N8A2 993 aa24.48■■□□□ 1.51
LIMS2-215ENST00000484252 RGS12O14924 1447 aa24.48■■□□□ 1.51
LIMS2-215ENST00000484252 TRAK2O60296 914 aa24.47■■□□□ 1.51
LIMS2-215ENST00000484252 GOLGA6L3A6NEY3 463 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms