RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 CENPQQ7L2Z9 268 aaPredicted RBP15.37■□□□□ 0.05
SND1-210ENST00000483503 ZNF428Q96B54 188 aa15.37■□□□□ 0.05
SND1-210ENST00000483503 PHF8Q9UPP1 1060 aa15.37■□□□□ 0.05
SND1-210ENST00000483503 FLT4P35916 1363 aa15.36■□□□□ 0.05
SND1-210ENST00000483503 NWD1Q149M9 1564 aa15.36■□□□□ 0.05
SND1-210ENST00000483503 EIF4A2Q14240 407 aaKnown RBP15.36■□□□□ 0.05
SND1-210ENST00000483503 NLRP6P59044 892 aa15.35■□□□□ 0.05
SND1-210ENST00000483503 GNAI1P63096 354 aa15.35■□□□□ 0.05
SND1-210ENST00000483503 ARHGEF10O15013 1369 aa15.35■□□□□ 0.05
SND1-210ENST00000483503 EXOSC9Q06265 439 aaKnown RBP15.34■□□□□ 0.05
SND1-210ENST00000483503 IFT57Q9NWB7 429 aa15.34■□□□□ 0.05
SND1-210ENST00000483503 PIK3C2AO00443 1686 aa15.34■□□□□ 0.05
SND1-210ENST00000483503 AMPHP49418 695 aa15.33■□□□□ 0.04
SND1-210ENST00000483503 ALDH1L2Q3SY69 923 aa15.33■□□□□ 0.04
SND1-210ENST00000483503 ZKSCAN2Q63HK3 967 aa15.33■□□□□ 0.04
SND1-210ENST00000483503 C14orf37Q86TY3 774 aa15.33■□□□□ 0.04
SND1-210ENST00000483503 FRAT1Q92837 279 aaPredicted RBP15.33■□□□□ 0.04
SND1-210ENST00000483503 PHACTR3Q96KR7 559 aa15.33■□□□□ 0.04
SND1-210ENST00000483503 MAP3K19Q56UN5 1328 aa15.33■□□□□ 0.04
SND1-210ENST00000483503 TSR2Q969E8 191 aaKnown RBP15.32■□□□□ 0.04
SND1-210ENST00000483503 PEAK1Q9H792 1746 aa15.31■□□□□ 0.04
SND1-210ENST00000483503 IPO8O15397 1037 aaKnown RBP15.31■□□□□ 0.04
SND1-210ENST00000483503 SULT6B1Q6IMI4 303 aa15.31■□□□□ 0.04
SND1-210ENST00000483503 ABTB2Q8N961 1025 aa15.31■□□□□ 0.04
SND1-210ENST00000483503 SMC4Q9NTJ3 1288 aa15.31■□□□□ 0.04
SND1-210ENST00000483503 KDM2BQ8NHM5 1336 aa15.31■□□□□ 0.04
SND1-210ENST00000483503 KIF16BQ96L93 1317 aa15.31■□□□□ 0.04
SND1-210ENST00000483503 RTL1A6NKG5 1358 aa15.31■□□□□ 0.04
SND1-210ENST00000483503 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
SND1-210ENST00000483503 HAP1P54257 671 aaPredicted RBP15.3■□□□□ 0.04
SND1-210ENST00000483503 HSP90AB2PQ58FF8 381 aa15.3■□□□□ 0.04
SND1-210ENST00000483503 PROSER2Q86WR7 435 aaPredicted RBP15.3■□□□□ 0.04
SND1-210ENST00000483503 NCOA3Q9Y6Q9 1424 aa15.29■□□□□ 0.04
SND1-210ENST00000483503 PAK3O75914 559 aaPredicted RBP15.29■□□□□ 0.04
SND1-210ENST00000483503 ZNF853P0CG23 659 aa15.29■□□□□ 0.04
SND1-210ENST00000483503 PSME1Q06323 249 aa15.29■□□□□ 0.04
SND1-210ENST00000483503 CLUAP1Q96AJ1 413 aa15.29■□□□□ 0.04
SND1-210ENST00000483503 BRPF1P55201 1214 aaPredicted RBP15.28■□□□□ 0.04
SND1-210ENST00000483503 ESCO1Q5FWF5 840 aa15.28■□□□□ 0.04
SND1-210ENST00000483503 FTSJ3Q8IY81 847 aaKnown RBP15.28■□□□□ 0.04
SND1-210ENST00000483503 DZIP1LQ8IYY4 767 aaKnown RBP15.28■□□□□ 0.04
SND1-210ENST00000483503 KCNH5Q8NCM2 988 aa15.28■□□□□ 0.04
SND1-210ENST00000483503 CFAP44Q96MT7 982 aa15.28■□□□□ 0.04
SND1-210ENST00000483503 PANK1Q8TE04 598 aa15.27■□□□□ 0.04
SND1-210ENST00000483503 COG6Q9Y2V7 657 aa15.27■□□□□ 0.04
SND1-210ENST00000483503 LAS1LQ9Y4W2 734 aaKnown RBP15.27■□□□□ 0.04
SND1-210ENST00000483503 KDRP35968 1356 aa15.26■□□□□ 0.03
SND1-210ENST00000483503 IGSF1Q8N6C5 1336 aa15.26■□□□□ 0.03
SND1-210ENST00000483503 DLG5Q8TDM6 1919 aa15.26■□□□□ 0.03
SND1-210ENST00000483503 SOX12O15370 315 aa15.26■□□□□ 0.03
SND1-210ENST00000483503 SSH1Q8WYL5 1049 aa15.26■□□□□ 0.03
SND1-210ENST00000483503 C19orf44Q9H6X5 657 aa15.26■□□□□ 0.03
SND1-210ENST00000483503 KIF1AQ12756 1690 aa15.25■□□□□ 0.03
SND1-210ENST00000483503 HOXC9P31274 260 aa15.25■□□□□ 0.03
SND1-210ENST00000483503 MVPQ14764 893 aaKnown RBP15.25■□□□□ 0.03
SND1-210ENST00000483503 ATF7IPQ6VMQ6 1270 aa15.25■□□□□ 0.03
SND1-210ENST00000483503 GAS2L2Q8NHY3 880 aa15.25■□□□□ 0.03
SND1-210ENST00000483503 BCL2L13Q9BXK5 485 aa15.25■□□□□ 0.03
SND1-210ENST00000483503 CHMP4BQ9H444 224 aaKnown RBP15.25■□□□□ 0.03
SND1-210ENST00000483503 MARF1Q9Y4F3 1742 aaKnown RBP15.24■□□□□ 0.03
SND1-210ENST00000483503 HTATSF1O43719 755 aaKnown RBP15.24■□□□□ 0.03
SND1-210ENST00000483503 AEBP1Q8IUX7 1158 aa15.24■□□□□ 0.03
SND1-210ENST00000483503 DCCP43146 1447 aa15.24■□□□□ 0.03
SND1-210ENST00000483503 RTF1Q92541 710 aaKnown RBP15.23■□□□□ 0.03
SND1-210ENST00000483503 ARHGAP45Q92619 1136 aa15.23■□□□□ 0.03
SND1-210ENST00000483503 MBIPQ9NS73 344 aa15.23■□□□□ 0.03
SND1-210ENST00000483503 DDX19BQ9UMR2 479 aa15.23■□□□□ 0.03
SND1-210ENST00000483503 VAMP4O75379 141 aa15.22■□□□□ 0.03
SND1-210ENST00000483503 IP6K1Q92551 441 aa15.22■□□□□ 0.03
SND1-210ENST00000483503 EYA1Q99502 592 aa15.22■□□□□ 0.03
SND1-210ENST00000483503 RWDD1Q9H446 243 aaPredicted RBP15.22■□□□□ 0.03
SND1-210ENST00000483503 NOB1Q9ULX3 412 aaKnown RBP15.22■□□□□ 0.03
SND1-210ENST00000483503 RLBP1P12271 317 aa15.21■□□□□ 0.03
SND1-210ENST00000483503 NUTM2GQ5VZR2 741 aa15.21■□□□□ 0.03
SND1-210ENST00000483503 THUMPD2Q9BTF0 503 aaKnown RBP15.21■□□□□ 0.03
SND1-210ENST00000483503 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
SND1-210ENST00000483503 TRIM27P14373 513 aa15.2■□□□□ 0.02
SND1-210ENST00000483503 ATF3P18847 181 aa15.2■□□□□ 0.02
SND1-210ENST00000483503 TWISTNBQ3B726 338 aaPredicted RBP15.2■□□□□ 0.02
SND1-210ENST00000483503 RBM33Q96EV2 1170 aaKnown RBP15.2■□□□□ 0.02
SND1-210ENST00000483503 NFAT5O94916 1531 aa15.2■□□□□ 0.02
SND1-210ENST00000483503 KIAA0232Q92628 1395 aa15.2■□□□□ 0.02
SND1-210ENST00000483503 PHRF1Q9P1Y6 1649 aaKnown RBP15.19■□□□□ 0.02
SND1-210ENST00000483503 CHL1O00533 1208 aa15.19■□□□□ 0.02
SND1-210ENST00000483503 MRPL50Q8N5N7 158 aaKnown RBP15.19■□□□□ 0.02
SND1-210ENST00000483503 MST1RQ04912 1400 aa15.18■□□□□ 0.02
SND1-210ENST00000483503 FAM83GA6ND36 823 aa15.18■□□□□ 0.02
SND1-210ENST00000483503 PDE4AP27815 886 aa15.18■□□□□ 0.02
SND1-210ENST00000483503 KRT28Q7Z3Y7 464 aa15.18■□□□□ 0.02
SND1-210ENST00000483503 ORAI2Q96SN7 254 aa15.18■□□□□ 0.02
SND1-210ENST00000483503 SLIT3O75094 1523 aa15.17■□□□□ 0.02
SND1-210ENST00000483503 LTN1O94822 1766 aa15.17■□□□□ 0.02
SND1-210ENST00000483503 MTHFSDQ2M296 383 aaKnown RBP15.17■□□□□ 0.02
SND1-210ENST00000483503 ITPRIPQ8IWB1 547 aa15.17■□□□□ 0.02
SND1-210ENST00000483503 BACH2Q9BYV9 841 aa15.17■□□□□ 0.02
SND1-210ENST00000483503 API5Q9BZZ5 524 aaKnown RBP15.17■□□□□ 0.02
SND1-210ENST00000483503 BABAM1Q9NWV8 329 aa15.17■□□□□ 0.02
SND1-210ENST00000483503 TMEM94Q12767 1356 aa15.16■□□□□ 0.02
SND1-210ENST00000483503 FOXO3O43524 673 aa15.16■□□□□ 0.02
SND1-210ENST00000483503 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms