RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 AEBP1Q8IUX7 1158 aa13.84□□□□□ -0.19
DDX39B-219ENST00000481456 SPC24Q8NBT2 197 aa13.84□□□□□ -0.19
DDX39B-219ENST00000481456 SRCIN1Q9C0H9 1055 aa13.84□□□□□ -0.19
DDX39B-219ENST00000481456 MBD5Q9P267 1494 aa13.83□□□□□ -0.19
DDX39B-219ENST00000481456 SLC4A2P04920 1241 aa13.83□□□□□ -0.2
DDX39B-219ENST00000481456 TEX35Q5T0J7 233 aa13.83□□□□□ -0.2
DDX39B-219ENST00000481456 ATP10BO94823 1461 aa13.83□□□□□ -0.2
DDX39B-219ENST00000481456 OFD1O75665 1012 aa13.83□□□□□ -0.2
DDX39B-219ENST00000481456 CABP1Q9NZU7 370 aa13.83□□□□□ -0.2
DDX39B-219ENST00000481456 KDM5BQ9UGL1 1544 aa13.83□□□□□ -0.2
DDX39B-219ENST00000481456 PSMA5P28066 241 aa13.82□□□□□ -0.2
DDX39B-219ENST00000481456 CDK19Q9BWU1 502 aa13.82□□□□□ -0.2
DDX39B-219ENST00000481456 ZNF608Q9ULD9 1512 aaPredicted RBP13.82□□□□□ -0.2
DDX39B-219ENST00000481456 PDCP20941 246 aa13.82□□□□□ -0.2
DDX39B-219ENST00000481456 LRSAM1Q6UWE0 723 aa13.82□□□□□ -0.2
DDX39B-219ENST00000481456 CCDC30Q5VVM6 783 aa13.82□□□□□ -0.2
DDX39B-219ENST00000481456 RBM25P49756 843 aaKnown RBP13.81□□□□□ -0.2
DDX39B-219ENST00000481456 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
DDX39B-219ENST00000481456 SYCP2Q9BX26 1530 aa13.81□□□□□ -0.2
DDX39B-219ENST00000481456 CCDC66A2RUB6 948 aa13.81□□□□□ -0.2
DDX39B-219ENST00000481456 CCDC183Q5T5S1 534 aa13.81□□□□□ -0.2
DDX39B-219ENST00000481456 TTC22Q5TAA0 569 aa13.81□□□□□ -0.2
DDX39B-219ENST00000481456 CCDC73Q6ZRK6 1079 aa13.81□□□□□ -0.2
DDX39B-219ENST00000481456 NUTM2FA1L443 756 aa13.81□□□□□ -0.2
DDX39B-219ENST00000481456 EIF2S2P20042 333 aaKnown RBP13.8□□□□□ -0.2
DDX39B-219ENST00000481456 PDCL2Q8N4E4 241 aa13.8□□□□□ -0.2
DDX39B-219ENST00000481456 GOLGA6L1Q8N7Z2 621 aa13.8□□□□□ -0.2
DDX39B-219ENST00000481456 LTV1Q96GA3 475 aaPredicted RBP13.8□□□□□ -0.2
DDX39B-219ENST00000481456 ARGLU1Q9NWB6 273 aaPredicted RBP13.8□□□□□ -0.2
DDX39B-219ENST00000481456 SURF6O75683 361 aaKnown RBP13.8□□□□□ -0.2
DDX39B-219ENST00000481456 ARHGAP45Q92619 1136 aa13.8□□□□□ -0.2
DDX39B-219ENST00000481456 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
DDX39B-219ENST00000481456 HOMER1Q86YM7 354 aa13.8□□□□□ -0.2
DDX39B-219ENST00000481456 CCDC34Q96HJ3 373 aa13.8□□□□□ -0.2
DDX39B-219ENST00000481456 THUMPD2Q9BTF0 503 aaKnown RBP13.79□□□□□ -0.2
DDX39B-219ENST00000481456 ZKSCAN5Q9Y2L8 839 aa13.79□□□□□ -0.2
DDX39B-219ENST00000481456 ANKRD36BQ8N2N9 1353 aa13.79□□□□□ -0.2
DDX39B-219ENST00000481456 SMARCA5O60264 1052 aaPredicted RBP13.79□□□□□ -0.2
DDX39B-219ENST00000481456 CCDC112Q8NEF3 446 aa13.79□□□□□ -0.2
DDX39B-219ENST00000481456 NAT10Q9H0A0 1025 aaKnown RBP13.79□□□□□ -0.2
DDX39B-219ENST00000481456 GAS2L2Q8NHY3 880 aa13.78□□□□□ -0.2
DDX39B-219ENST00000481456 NOS1P29475 1434 aa13.78□□□□□ -0.2
DDX39B-219ENST00000481456 ZBTB40Q9NUA8 1239 aa13.78□□□□□ -0.2
DDX39B-219ENST00000481456 KRT85P78386 507 aa13.78□□□□□ -0.2
DDX39B-219ENST00000481456 GPS2Q13227 327 aa13.78□□□□□ -0.2
DDX39B-219ENST00000481456 UVSSAQ2YD98 709 aa13.78□□□□□ -0.2
DDX39B-219ENST00000481456 PRIMPOLQ96LW4 560 aa13.78□□□□□ -0.2
DDX39B-219ENST00000481456 CARD14Q9BXL6 1004 aa13.78□□□□□ -0.2
DDX39B-219ENST00000481456 DISP1Q96F81 1524 aa13.78□□□□□ -0.2
DDX39B-219ENST00000481456 G3BP1Q13283 466 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDX39B-219ENST00000481456 TRMT2AQ8IZ69 625 aaKnown RBP13.78□□□□□ -0.2
DDX39B-219ENST00000481456 CYP46A1Q9Y6A2 500 aa13.78□□□□□ -0.2
DDX39B-219ENST00000481456 TNMDQ9H2S6 317 aa13.77□□□□□ -0.2
DDX39B-219ENST00000481456 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.2
DDX39B-219ENST00000481456 ABCC2Q92887 1545 aa13.77□□□□□ -0.2
DDX39B-219ENST00000481456 C14orf93Q9H972 538 aaKnown RBP13.77□□□□□ -0.21
DDX39B-219ENST00000481456 PRDM10Q9NQV6 1147 aa13.77□□□□□ -0.21
DDX39B-219ENST00000481456 CLASRPQ8N2M8 674 aaKnown RBP13.77□□□□□ -0.21
DDX39B-219ENST00000481456 ZSCAN31Q96LW9 406 aaPredicted RBP13.77□□□□□ -0.21
DDX39B-219ENST00000481456 ZNF521Q96K83 1311 aa13.77□□□□□ -0.21
DDX39B-219ENST00000481456 BCORL1Q5H9F3 1711 aa13.77□□□□□ -0.21
DDX39B-219ENST00000481456 SULT6B1Q6IMI4 303 aa13.77□□□□□ -0.21
DDX39B-219ENST00000481456 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.21
DDX39B-219ENST00000481456 HIP1O00291 1037 aa13.76□□□□□ -0.21
DDX39B-219ENST00000481456 MX1P20591 662 aa13.76□□□□□ -0.21
DDX39B-219ENST00000481456 TEFQ10587 303 aa13.76□□□□□ -0.21
DDX39B-219ENST00000481456 USP25Q9UHP3 1055 aa13.76□□□□□ -0.21
DDX39B-219ENST00000481456 DENND4BO75064 1496 aaPredicted RBP13.76□□□□□ -0.21
DDX39B-219ENST00000481456 FSD2A1L4K1 749 aa13.76□□□□□ -0.21
DDX39B-219ENST00000481456 MNS1Q8NEH6 495 aa13.76□□□□□ -0.21
DDX39B-219ENST00000481456 A0A0U1RQG5 324 aaPredicted RBP13.76□□□□□ -0.21
DDX39B-219ENST00000481456 PDIA4P13667 645 aaKnown RBP13.76□□□□□ -0.21
DDX39B-219ENST00000481456 GORABQ5T7V8 394 aa13.76□□□□□ -0.21
DDX39B-219ENST00000481456 NUP62CLQ9H1M0 184 aa13.76□□□□□ -0.21
DDX39B-219ENST00000481456 CBX1P83916 185 aa13.75□□□□□ -0.21
DDX39B-219ENST00000481456 PBRM1Q86U86 1689 aa13.75□□□□□ -0.21
DDX39B-219ENST00000481456 PRIM1P49642 420 aaKnown RBP13.75□□□□□ -0.21
DDX39B-219ENST00000481456 SLC52A1Q9NWF4 448 aa13.75□□□□□ -0.21
DDX39B-219ENST00000481456 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.74□□□□□ -0.21
DDX39B-219ENST00000481456 TAF3Q5VWG9 929 aa13.74□□□□□ -0.21
DDX39B-219ENST00000481456 ANKRD1Q15327 319 aa13.74□□□□□ -0.21
DDX39B-219ENST00000481456 CCAR2Q8N163 923 aaKnown RBP13.74□□□□□ -0.21
DDX39B-219ENST00000481456 PDRG1Q9NUG6 133 aa13.74□□□□□ -0.21
DDX39B-219ENST00000481456 EXOC6BQ9Y2D4 811 aa13.74□□□□□ -0.21
DDX39B-219ENST00000481456 RTEL1-TNFRSF6BF6WH68 1400 aa13.74□□□□□ -0.21
DDX39B-219ENST00000481456 MAP3K11Q16584 847 aa13.74□□□□□ -0.21
DDX39B-219ENST00000481456 LARP1BQ659C4 914 aaKnown RBP13.74□□□□□ -0.21
DDX39B-219ENST00000481456 UPF3BQ9BZI7 483 aaKnown RBP13.74□□□□□ -0.21
DDX39B-219ENST00000481456 PODXL2Q9NZ53 605 aa13.74□□□□□ -0.21
DDX39B-219ENST00000481456 ADCY5O95622 1261 aa13.73□□□□□ -0.21
DDX39B-219ENST00000481456 TERF1P54274 439 aa13.73□□□□□ -0.21
DDX39B-219ENST00000481456 BCL11BQ9C0K0 894 aaPredicted RBP13.73□□□□□ -0.21
DDX39B-219ENST00000481456 ANTXR1Q9H6X2 564 aa13.73□□□□□ -0.21
DDX39B-219ENST00000481456 NOL7Q9UMY1 257 aaKnown RBP13.73□□□□□ -0.21
DDX39B-219ENST00000481456 NEXNQ0ZGT2 675 aa13.73□□□□□ -0.21
DDX39B-219ENST00000481456 MAST1Q9Y2H9 1570 aa13.73□□□□□ -0.21
DDX39B-219ENST00000481456 KINO60870 393 aaKnown RBP13.73□□□□□ -0.21
DDX39B-219ENST00000481456 MRPL50Q8N5N7 158 aaKnown RBP13.73□□□□□ -0.21
DDX39B-219ENST00000481456 FBXW7Q969H0 707 aa13.73□□□□□ -0.21
DDX39B-219ENST00000481456 MBIPQ9NS73 344 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms