RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SLKQ9H2G2 1235 aaPredicted RBP31■■■□□ 2.55
SYNGAP1-206ENST00000479510 GCC1Q96CN9 775 aa30.99■■■□□ 2.55
SYNGAP1-206ENST00000479510 CPS1P31327 1500 aa30.98■■■□□ 2.55
SYNGAP1-206ENST00000479510 ZBTB7BO15156 539 aaPredicted RBP30.97■■■□□ 2.55
SYNGAP1-206ENST00000479510 CHD1LQ86WJ1 897 aa30.97■■■□□ 2.55
SYNGAP1-206ENST00000479510 CCDC61Q9Y6R9 512 aa30.97■■■□□ 2.55
SYNGAP1-206ENST00000479510 COG3Q96JB2 828 aa30.97■■■□□ 2.55
SYNGAP1-206ENST00000479510 EMILIN1Q9Y6C2 1016 aa30.97■■■□□ 2.55
SYNGAP1-206ENST00000479510 HMOX1P09601 288 aa30.96■■■□□ 2.55
SYNGAP1-206ENST00000479510 MFAP1P55081 439 aaKnown RBP30.96■■■□□ 2.55
SYNGAP1-206ENST00000479510 NUDT16Q96DE0 195 aaKnown RBP30.96■■■□□ 2.55
SYNGAP1-206ENST00000479510 ZNF692Q9BU19 519 aaPredicted RBP30.96■■■□□ 2.55
SYNGAP1-206ENST00000479510 METP08581 1390 aa30.96■■■□□ 2.55
SYNGAP1-206ENST00000479510 ABCC4O15439 1325 aa30.95■■■□□ 2.55
SYNGAP1-206ENST00000479510 NME9Q86XW9 330 aa30.95■■■□□ 2.55
SYNGAP1-206ENST00000479510 CFAP44Q96MT7 982 aa30.95■■■□□ 2.55
SYNGAP1-206ENST00000479510 KIF24Q5T7B8 1368 aa30.95■■■□□ 2.55
SYNGAP1-206ENST00000479510 AKAP12Q02952 1782 aa30.95■■■□□ 2.54
SYNGAP1-206ENST00000479510 BMP2KLQ5H9B9 411 aa30.94■■■□□ 2.54
SYNGAP1-206ENST00000479510 C3P01024 1663 aa30.94■■■□□ 2.54
SYNGAP1-206ENST00000479510 RBM25P49756 843 aaKnown RBP30.93■■■□□ 2.54
SYNGAP1-206ENST00000479510 MBIPQ9NS73 344 aa30.93■■■□□ 2.54
SYNGAP1-206ENST00000479510 FBLN1P23142 703 aa30.92■■■□□ 2.54
SYNGAP1-206ENST00000479510 API5Q9BZZ5 524 aaKnown RBP30.91■■■□□ 2.54
SYNGAP1-206ENST00000479510 TSPOAP1O95153 1857 aa30.91■■■□□ 2.54
SYNGAP1-206ENST00000479510 ITSN1Q15811 1721 aa30.91■■■□□ 2.54
SYNGAP1-206ENST00000479510 NRKQ7Z2Y5 1582 aa30.9■■■□□ 2.54
SYNGAP1-206ENST00000479510 CHMP5Q9NZZ3 219 aa30.9■■■□□ 2.54
SYNGAP1-206ENST00000479510 TWISTNBQ3B726 338 aaPredicted RBP30.88■■■□□ 2.53
SYNGAP1-206ENST00000479510 SNX21Q969T3 373 aa30.88■■■□□ 2.53
SYNGAP1-206ENST00000479510 LNPKQ9C0E8 428 aa30.88■■■□□ 2.53
SYNGAP1-206ENST00000479510 BRPF3Q9ULD4 1205 aa30.88■■■□□ 2.53
SYNGAP1-206ENST00000479510 HAP1P54257 671 aaPredicted RBP30.87■■■□□ 2.53
SYNGAP1-206ENST00000479510 TSPYL6Q8N831 410 aa30.87■■■□□ 2.53
SYNGAP1-206ENST00000479510 TXNDC2Q86VQ3 553 aa30.86■■■□□ 2.53
SYNGAP1-206ENST00000479510 HSCBQ8IWL3 235 aa30.86■■■□□ 2.53
SYNGAP1-206ENST00000479510 THUMPD2Q9BTF0 503 aaKnown RBP30.86■■■□□ 2.53
SYNGAP1-206ENST00000479510 DLG5Q8TDM6 1919 aa30.86■■■□□ 2.53
SYNGAP1-206ENST00000479510 EIF5BO60841 1220 aaKnown RBP30.85■■■□□ 2.53
SYNGAP1-206ENST00000479510 NCOA3Q9Y6Q9 1424 aa30.84■■■□□ 2.53
SYNGAP1-206ENST00000479510 ESF1Q9H501 851 aaKnown RBP30.83■■■□□ 2.53
SYNGAP1-206ENST00000479510 ZRANB1Q9UGI0 708 aa30.82■■■□□ 2.52
SYNGAP1-206ENST00000479510 L1TD1Q5T7N2 865 aaKnown RBP30.82■■■□□ 2.52
SYNGAP1-206ENST00000479510 ANKRD45Q5TZF3 282 aa30.81■■■□□ 2.52
SYNGAP1-206ENST00000479510 MCM4P33991 863 aa30.8■■■□□ 2.52
SYNGAP1-206ENST00000479510 TNRQ92752 1358 aa30.8■■■□□ 2.52
SYNGAP1-206ENST00000479510 MLECQ14165 292 aa30.79■■■□□ 2.52
SYNGAP1-206ENST00000479510 C8orf58Q8NAV2 365 aa30.79■■■□□ 2.52
SYNGAP1-206ENST00000479510 TMEM2Q9UHN6 1383 aa30.78■■■□□ 2.52
SYNGAP1-206ENST00000479510 RRS1Q15050 365 aaKnown RBP30.78■■■□□ 2.52
SYNGAP1-206ENST00000479510 SIRT2Q8IXJ6 389 aa30.77■■■□□ 2.52
SYNGAP1-206ENST00000479510 PRR36Q9H6K5 1346 aa30.76■■■□□ 2.52
SYNGAP1-206ENST00000479510 TOPAZ1Q8N9V7 1692 aa30.76■■■□□ 2.51
SYNGAP1-206ENST00000479510 CIZ1Q9ULV3 898 aaPredicted RBP30.75■■■□□ 2.51
SYNGAP1-206ENST00000479510 KIAA0232Q92628 1395 aa30.75■■■□□ 2.51
SYNGAP1-206ENST00000479510 INTS3Q68E01 1043 aaKnown RBP30.75■■■□□ 2.51
SYNGAP1-206ENST00000479510 OVOS2A0A0J9YW53 1432 aa30.74■■■□□ 2.51
SYNGAP1-206ENST00000479510 OVOS2Q6IE36 1432 aa30.74■■■□□ 2.51
SYNGAP1-206ENST00000479510 PLEKHG3A1L390 1219 aa30.74■■■□□ 2.51
SYNGAP1-206ENST00000479510 DDIT3P35638 169 aa30.74■■■□□ 2.51
SYNGAP1-206ENST00000479510 UBR1Q8IWV7 1749 aa30.74■■■□□ 2.51
SYNGAP1-206ENST00000479510 TTC21BQ7Z4L5 1316 aa30.73■■■□□ 2.51
SYNGAP1-206ENST00000479510 ELL2O00472 640 aaPredicted RBP30.73■■■□□ 2.51
SYNGAP1-206ENST00000479510 ROBO2Q9HCK4 1378 aa30.72■■■□□ 2.51
SYNGAP1-206ENST00000479510 C1orf115Q9H7X2 142 aa30.72■■■□□ 2.51
SYNGAP1-206ENST00000479510 NCKAP5LQ9HCH0 1330 aa30.72■■■□□ 2.51
SYNGAP1-206ENST00000479510 ADAMTS13Q76LX8 1427 aa30.72■■■□□ 2.51
SYNGAP1-206ENST00000479510 EIF4A2Q14240 407 aaKnown RBP30.71■■■□□ 2.51
SYNGAP1-206ENST00000479510 NALCNQ8IZF0 1738 aa30.71■■■□□ 2.51
SYNGAP1-206ENST00000479510 CHL1O00533 1208 aa30.7■■■□□ 2.51
SYNGAP1-206ENST00000479510 USP31Q70CQ4 1352 aa30.69■■■□□ 2.5
SYNGAP1-206ENST00000479510 DDX11L8A8MPP1 907 aa30.69■■■□□ 2.5
SYNGAP1-206ENST00000479510 DCTPP1Q9H773 170 aa30.69■■■□□ 2.5
SYNGAP1-206ENST00000479510 FAM83GA6ND36 823 aa30.69■■■□□ 2.5
SYNGAP1-206ENST00000479510 PLEKHG1Q9ULL1 1385 aa30.68■■■□□ 2.5
SYNGAP1-206ENST00000479510 TBC1D9Q6ZT07 1266 aa30.68■■■□□ 2.5
SYNGAP1-206ENST00000479510 SPRYD3Q8NCJ5 442 aa30.68■■■□□ 2.5
SYNGAP1-206ENST00000479510 RGPD1P0DJD0 1748 aa30.68■■■□□ 2.5
SYNGAP1-206ENST00000479510 CDC45O75419 566 aa30.67■■■□□ 2.5
SYNGAP1-206ENST00000479510 USP6P35125 1406 aa30.67■■■□□ 2.5
SYNGAP1-206ENST00000479510 PTPRCP08575 1304 aa30.67■■■□□ 2.5
SYNGAP1-206ENST00000479510 SULT6B1Q6IMI4 303 aa30.67■■■□□ 2.5
SYNGAP1-206ENST00000479510 RTN4Q9NQC3 1192 aaKnown RBP30.67■■■□□ 2.5
SYNGAP1-206ENST00000479510 RPAP2Q8IXW5 612 aaPredicted RBP30.66■■■□□ 2.5
SYNGAP1-206ENST00000479510 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.65■■■□□ 2.5
SYNGAP1-206ENST00000479510 KIF2CQ99661 725 aa30.65■■■□□ 2.5
SYNGAP1-206ENST00000479510 ACEP12821 1306 aa30.65■■■□□ 2.5
SYNGAP1-206ENST00000479510 FAM43AQ8N2R8 423 aa30.64■■■□□ 2.5
SYNGAP1-206ENST00000479510 RGS12O14924 1447 aa30.64■■■□□ 2.5
SYNGAP1-206ENST00000479510 DCTN1Q14203 1278 aa30.64■■■□□ 2.5
SYNGAP1-206ENST00000479510 ANKRD44Q8N8A2 993 aa30.64■■■□□ 2.5
SYNGAP1-206ENST00000479510 FSD2A1L4K1 749 aa30.63■■■□□ 2.49
SYNGAP1-206ENST00000479510 ARHGEF10O15013 1369 aa30.63■■■□□ 2.49
SYNGAP1-206ENST00000479510 HSP90AB1P08238 724 aaKnown RBP30.62■■■□□ 2.49
SYNGAP1-206ENST00000479510 AEBP1Q8IUX7 1158 aa30.62■■■□□ 2.49
SYNGAP1-206ENST00000479510 SSH2Q76I76 1423 aa30.62■■■□□ 2.49
SYNGAP1-206ENST00000479510 TRAK2O60296 914 aa30.61■■■□□ 2.49
SYNGAP1-206ENST00000479510 PTMSP20962 102 aa30.61■■■□□ 2.49
SYNGAP1-206ENST00000479510 ATP10DQ9P241 1426 aa30.61■■■□□ 2.49
SYNGAP1-206ENST00000479510 PLEKHM2Q8IWE5 1019 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms