RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 ATP7BP35670 1465 aa16.35■□□□□ 0.21
CCNL1-216ENST00000475298 PPIP5K1Q6PFW1 1433 aa16.35■□□□□ 0.21
CCNL1-216ENST00000475298 MAP2P11137 1827 aaKnown RBP16.34■□□□□ 0.21
CCNL1-216ENST00000475298 WASLO00401 505 aaPredicted RBP16.34■□□□□ 0.21
CCNL1-216ENST00000475298 TBC1D2Q9BYX2 928 aa16.34■□□□□ 0.21
CCNL1-216ENST00000475298 ZMYM3Q14202 1370 aa16.34■□□□□ 0.21
CCNL1-216ENST00000475298 TRAK2O60296 914 aa16.34■□□□□ 0.21
CCNL1-216ENST00000475298 PHACTR3Q96KR7 559 aa16.34■□□□□ 0.21
CCNL1-216ENST00000475298 NOB1Q9ULX3 412 aaKnown RBP16.34■□□□□ 0.21
CCNL1-216ENST00000475298 THUMPD2Q9BTF0 503 aaKnown RBP16.33■□□□□ 0.2
CCNL1-216ENST00000475298 ESF1Q9H501 851 aaKnown RBP16.33■□□□□ 0.2
CCNL1-216ENST00000475298 CT47B1P0C2W7 299 aaPredicted RBP16.33■□□□□ 0.2
CCNL1-216ENST00000475298 FCHSD2O94868 740 aa16.32■□□□□ 0.2
CCNL1-216ENST00000475298 FGD1P98174 961 aa16.32■□□□□ 0.2
CCNL1-216ENST00000475298 KIAA1211Q6ZU35 1233 aa16.32■□□□□ 0.2
CCNL1-216ENST00000475298 ITPRIPQ8IWB1 547 aa16.32■□□□□ 0.2
CCNL1-216ENST00000475298 IL16Q14005 1332 aa16.32■□□□□ 0.2
CCNL1-216ENST00000475298 RWDD1Q9H446 243 aaPredicted RBP16.31■□□□□ 0.2
CCNL1-216ENST00000475298 FAM135BQ49AJ0 1406 aa16.31■□□□□ 0.2
CCNL1-216ENST00000475298 ATF7IPQ6VMQ6 1270 aa16.31■□□□□ 0.2
CCNL1-216ENST00000475298 NUDT16Q96DE0 195 aaKnown RBP16.31■□□□□ 0.2
CCNL1-216ENST00000475298 CPSF1Q10570 1443 aaKnown RBP16.31■□□□□ 0.2
CCNL1-216ENST00000475298 CDC42BPGQ6DT37 1551 aa16.31■□□□□ 0.2
CCNL1-216ENST00000475298 RRS1Q15050 365 aaKnown RBP16.3■□□□□ 0.2
CCNL1-216ENST00000475298 TMEM57Q8N5G2 664 aa16.29■□□□□ 0.2
CCNL1-216ENST00000475298 EDC4Q6P2E9 1401 aaKnown RBP16.29■□□□□ 0.2
CCNL1-216ENST00000475298 CPS1P31327 1500 aa16.29■□□□□ 0.2
CCNL1-216ENST00000475298 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCNL1-216ENST00000475298 TBC1D32Q96NH3 1257 aa16.28■□□□□ 0.2
CCNL1-216ENST00000475298 IL13P35225 146 aa16.27■□□□□ 0.2
CCNL1-216ENST00000475298 PRR36Q9H6K5 1346 aa16.27■□□□□ 0.19
CCNL1-216ENST00000475298 TRIM44Q96DX7 344 aaPredicted RBP16.27■□□□□ 0.19
CCNL1-216ENST00000475298 ISY1Q9ULR0 285 aaKnown RBP16.27■□□□□ 0.19
CCNL1-216ENST00000475298 NUTM2FA1L443 756 aa16.26■□□□□ 0.19
CCNL1-216ENST00000475298 NFE2L2Q16236 605 aa16.26■□□□□ 0.19
CCNL1-216ENST00000475298 DDX19BQ9UMR2 479 aa16.26■□□□□ 0.19
CCNL1-216ENST00000475298 CCDC61Q9Y6R9 512 aa16.26■□□□□ 0.19
CCNL1-216ENST00000475298 TNRQ92752 1358 aa16.26■□□□□ 0.19
CCNL1-216ENST00000475298 SPRYD3Q8NCJ5 442 aa16.26■□□□□ 0.19
CCNL1-216ENST00000475298 ELL2O00472 640 aaPredicted RBP16.25■□□□□ 0.19
CCNL1-216ENST00000475298 GAS2L3Q86XJ1 694 aa16.25■□□□□ 0.19
CCNL1-216ENST00000475298 TSPYL6Q8N831 410 aa16.25■□□□□ 0.19
CCNL1-216ENST00000475298 COG3Q96JB2 828 aa16.25■□□□□ 0.19
CCNL1-216ENST00000475298 ROBO2Q9HCK4 1378 aa16.24■□□□□ 0.19
CCNL1-216ENST00000475298 KIF16BQ96L93 1317 aa16.24■□□□□ 0.19
CCNL1-216ENST00000475298 OFD1O75665 1012 aa16.23■□□□□ 0.19
CCNL1-216ENST00000475298 MON2Q7Z3U7 1717 aa16.23■□□□□ 0.19
CCNL1-216ENST00000475298 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
CCNL1-216ENST00000475298 FAM83GA6ND36 823 aa16.23■□□□□ 0.19
CCNL1-216ENST00000475298 CHMP5Q9NZZ3 219 aa16.23■□□□□ 0.19
CCNL1-216ENST00000475298 TMEM2Q9UHN6 1383 aa16.23■□□□□ 0.19
CCNL1-216ENST00000475298 KNDC1Q76NI1 1749 aa16.23■□□□□ 0.19
CCNL1-216ENST00000475298 ZBTB40Q9NUA8 1239 aa16.22■□□□□ 0.19
CCNL1-216ENST00000475298 TECPR2O15040 1411 aa16.22■□□□□ 0.19
CCNL1-216ENST00000475298 HDAC1Q13547 482 aaPredicted RBP16.22■□□□□ 0.19
CCNL1-216ENST00000475298 UBR1Q8IWV7 1749 aa16.21■□□□□ 0.19
CCNL1-216ENST00000475298 IPO8O15397 1037 aaKnown RBP16.21■□□□□ 0.19
CCNL1-216ENST00000475298 DCTN1Q14203 1278 aa16.21■□□□□ 0.19
CCNL1-216ENST00000475298 ALDH1L2Q3SY69 923 aa16.21■□□□□ 0.19
CCNL1-216ENST00000475298 MBIPQ9NS73 344 aa16.21■□□□□ 0.19
CCNL1-216ENST00000475298 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.19
CCNL1-216ENST00000475298 VAMP4O75379 141 aa16.21■□□□□ 0.19
CCNL1-216ENST00000475298 LTKP29376 864 aa16.21■□□□□ 0.19
CCNL1-216ENST00000475298 TERF1P54274 439 aa16.21■□□□□ 0.19
CCNL1-216ENST00000475298 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
CCNL1-216ENST00000475298 C3P01024 1663 aa16.21■□□□□ 0.18
CCNL1-216ENST00000475298 ITSN1Q15811 1721 aa16.21■□□□□ 0.18
CCNL1-216ENST00000475298 AKAP12Q02952 1782 aa16.2■□□□□ 0.18
CCNL1-216ENST00000475298 DLG5Q8TDM6 1919 aa16.2■□□□□ 0.18
CCNL1-216ENST00000475298 CEBPAP49715 358 aaPredicted RBP16.2■□□□□ 0.18
CCNL1-216ENST00000475298 ADAMTS13Q76LX8 1427 aa16.2■□□□□ 0.18
CCNL1-216ENST00000475298 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
CCNL1-216ENST00000475298 SMAP1Q8IYB5 467 aaPredicted RBP16.2■□□□□ 0.18
CCNL1-216ENST00000475298 AEBP1Q8IUX7 1158 aa16.19■□□□□ 0.18
CCNL1-216ENST00000475298 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
CCNL1-216ENST00000475298 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
CCNL1-216ENST00000475298 DDX11L8A8MPP1 907 aa16.19■□□□□ 0.18
CCNL1-216ENST00000475298 SLC26A8Q96RN1 970 aa16.19■□□□□ 0.18
CCNL1-216ENST00000475298 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.19■□□□□ 0.18
CCNL1-216ENST00000475298 SMC5Q8IY18 1101 aa16.18■□□□□ 0.18
CCNL1-216ENST00000475298 MRPL50Q8N5N7 158 aaKnown RBP16.18■□□□□ 0.18
CCNL1-216ENST00000475298 SIRT1Q96EB6 747 aa16.18■□□□□ 0.18
CCNL1-216ENST00000475298 C1orf115Q9H7X2 142 aa16.18■□□□□ 0.18
CCNL1-216ENST00000475298 UPF2Q9HAU5 1272 aaKnown RBP16.18■□□□□ 0.18
CCNL1-216ENST00000475298 SOX12O15370 315 aa16.18■□□□□ 0.18
CCNL1-216ENST00000475298 ZNF853P0CG23 659 aa16.18■□□□□ 0.18
CCNL1-216ENST00000475298 GNAI1P63096 354 aa16.18■□□□□ 0.18
CCNL1-216ENST00000475298 IFT57Q9NWB7 429 aa16.18■□□□□ 0.18
CCNL1-216ENST00000475298 ZSCAN30Q86W11 494 aa16.17■□□□□ 0.18
CCNL1-216ENST00000475298 C8orf58Q8NAV2 365 aa16.17■□□□□ 0.18
CCNL1-216ENST00000475298 PPP1R9BQ96SB3 815 aa16.17■□□□□ 0.18
CCNL1-216ENST00000475298 FAM13BQ9NYF5 915 aa16.17■□□□□ 0.18
CCNL1-216ENST00000475298 ACEP12821 1306 aa16.17■□□□□ 0.18
CCNL1-216ENST00000475298 TTC21BQ7Z4L5 1316 aa16.16■□□□□ 0.18
CCNL1-216ENST00000475298 EIF4A2Q14240 407 aaKnown RBP16.15■□□□□ 0.18
CCNL1-216ENST00000475298 TWISTNBQ3B726 338 aaPredicted RBP16.15■□□□□ 0.18
CCNL1-216ENST00000475298 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.15■□□□□ 0.18
CCNL1-216ENST00000475298 LNPKQ9C0E8 428 aa16.15■□□□□ 0.18
CCNL1-216ENST00000475298 MFAP1P55081 439 aaKnown RBP16.15■□□□□ 0.18
CCNL1-216ENST00000475298 SULT6B1Q6IMI4 303 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms