RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 PSME1Q06323 249 aa13.42□□□□□ -0.26
PCCB-213ENST00000475214 TCP11L2Q8N4U5 519 aa13.42□□□□□ -0.26
PCCB-213ENST00000475214 CDCA7LQ96GN5 454 aa13.42□□□□□ -0.26
PCCB-213ENST00000475214 PAK3O75914 559 aaPredicted RBP13.41□□□□□ -0.26
PCCB-213ENST00000475214 NEFMP07197 916 aa13.41□□□□□ -0.26
PCCB-213ENST00000475214 RRS1Q15050 365 aaKnown RBP13.41□□□□□ -0.26
PCCB-213ENST00000475214 MAPK8IP3Q9UPT6 1336 aa13.4□□□□□ -0.26
PCCB-213ENST00000475214 FOXO3O43524 673 aa13.4□□□□□ -0.26
PCCB-213ENST00000475214 FCHSD2O94868 740 aa13.4□□□□□ -0.26
PCCB-213ENST00000475214 ADAMTS2O95450 1211 aa13.4□□□□□ -0.26
PCCB-213ENST00000475214 NLRP6P59044 892 aa13.4□□□□□ -0.26
PCCB-213ENST00000475214 ERICH6BQ5W0A0 696 aa13.4□□□□□ -0.26
PCCB-213ENST00000475214 ABTB2Q8N961 1025 aa13.4□□□□□ -0.26
PCCB-213ENST00000475214 SLFN5Q08AF3 891 aa13.39□□□□□ -0.27
PCCB-213ENST00000475214 CCDC27Q2M243 656 aa13.39□□□□□ -0.27
PCCB-213ENST00000475214 PIK3C2AO00443 1686 aa13.39□□□□□ -0.27
PCCB-213ENST00000475214 E9PSI1 815 aa13.38□□□□□ -0.27
PCCB-213ENST00000475214 IL13P35225 146 aa13.38□□□□□ -0.27
PCCB-213ENST00000475214 NEUROD2Q15784 382 aa13.38□□□□□ -0.27
PCCB-213ENST00000475214 WWC1Q8IX03 1113 aa13.38□□□□□ -0.27
PCCB-213ENST00000475214 PLEKHF1Q96S99 279 aa13.38□□□□□ -0.27
PCCB-213ENST00000475214 RCAN3Q9UKA8 241 aa13.38□□□□□ -0.27
PCCB-213ENST00000475214 RNF123Q5XPI4 1314 aa13.38□□□□□ -0.27
PCCB-213ENST00000475214 KIF1AQ12756 1690 aa13.37□□□□□ -0.27
PCCB-213ENST00000475214 USP54Q70EL1 1684 aa13.37□□□□□ -0.27
PCCB-213ENST00000475214 DUSP27Q5VZP5 1158 aa13.37□□□□□ -0.27
PCCB-213ENST00000475214 WDR63Q8IWG1 891 aa13.37□□□□□ -0.27
PCCB-213ENST00000475214 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
PCCB-213ENST00000475214 USP21Q9UK80 565 aa13.37□□□□□ -0.27
PCCB-213ENST00000475214 TRPC5Q9UL62 973 aaPredicted RBP13.37□□□□□ -0.27
PCCB-213ENST00000475214 RRP7AQ9Y3A4 280 aaKnown RBP13.37□□□□□ -0.27
PCCB-213ENST00000475214 PXDNQ92626 1479 aa13.36□□□□□ -0.27
PCCB-213ENST00000475214 COL22A1Q8NFW1 1626 aaPredicted RBP13.36□□□□□ -0.27
PCCB-213ENST00000475214 SOX12O15370 315 aa13.36□□□□□ -0.27
PCCB-213ENST00000475214 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
PCCB-213ENST00000475214 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
PCCB-213ENST00000475214 TMPOP42166 694 aaKnown RBP13.35□□□□□ -0.27
PCCB-213ENST00000475214 AMPHP49418 695 aa13.35□□□□□ -0.27
PCCB-213ENST00000475214 IRX6P78412 446 aaPredicted RBP13.35□□□□□ -0.27
PCCB-213ENST00000475214 TRMT2AQ8IZ69 625 aaKnown RBP13.35□□□□□ -0.27
PCCB-213ENST00000475214 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
PCCB-213ENST00000475214 SPATA31A3Q5VYP0 1347 aa13.35□□□□□ -0.27
PCCB-213ENST00000475214 FLT4P35916 1363 aa13.34□□□□□ -0.27
PCCB-213ENST00000475214 KIF24Q5T7B8 1368 aa13.34□□□□□ -0.27
PCCB-213ENST00000475214 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
PCCB-213ENST00000475214 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
PCCB-213ENST00000475214 NUTM2GQ5VZR2 741 aa13.34□□□□□ -0.27
PCCB-213ENST00000475214 MAP3K19Q56UN5 1328 aa13.34□□□□□ -0.27
PCCB-213ENST00000475214 ATRNO75882 1429 aa13.33□□□□□ -0.28
PCCB-213ENST00000475214 HMOX1P09601 288 aa13.33□□□□□ -0.28
PCCB-213ENST00000475214 HAP1P54257 671 aaPredicted RBP13.33□□□□□ -0.28
PCCB-213ENST00000475214 EIF4A2Q14240 407 aaKnown RBP13.33□□□□□ -0.28
PCCB-213ENST00000475214 KCNH5Q8NCM2 988 aa13.33□□□□□ -0.28
PCCB-213ENST00000475214 PEAK1Q9H792 1746 aa13.33□□□□□ -0.28
PCCB-213ENST00000475214 MARF1Q9Y4F3 1742 aaKnown RBP13.33□□□□□ -0.28
PCCB-213ENST00000475214 RRP1P56182 461 aaKnown RBP13.32□□□□□ -0.28
PCCB-213ENST00000475214 RIPK4P57078 832 aa13.32□□□□□ -0.28
PCCB-213ENST00000475214 HSP90AB2PQ58FF8 381 aa13.32□□□□□ -0.28
PCCB-213ENST00000475214 ARHGEF10O15013 1369 aa13.32□□□□□ -0.28
PCCB-213ENST00000475214 MYH16Q9H6N6 1097 aa13.31□□□□□ -0.28
PCCB-213ENST00000475214 NFE2L2Q16236 605 aa13.3□□□□□ -0.28
PCCB-213ENST00000475214 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
PCCB-213ENST00000475214 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
PCCB-213ENST00000475214 RTL1A6NKG5 1358 aa13.3□□□□□ -0.28
PCCB-213ENST00000475214 TNS3Q68CZ2 1445 aa13.3□□□□□ -0.28
PCCB-213ENST00000475214 BCL9LQ86UU0 1499 aa13.29□□□□□ -0.28
PCCB-213ENST00000475214 HOXC9P31274 260 aa13.29□□□□□ -0.28
PCCB-213ENST00000475214 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
PCCB-213ENST00000475214 SULT6B1Q6IMI4 303 aa13.29□□□□□ -0.28
PCCB-213ENST00000475214 LMOD2Q6P5Q4 547 aa13.29□□□□□ -0.28
PCCB-213ENST00000475214 PPP4R2Q9NY27 417 aa13.29□□□□□ -0.28
PCCB-213ENST00000475214 TRIM35Q9UPQ4 493 aa13.29□□□□□ -0.28
PCCB-213ENST00000475214 TRPM3Q9HCF6 1732 aaPredicted RBP13.29□□□□□ -0.28
PCCB-213ENST00000475214 IL16Q14005 1332 aa13.29□□□□□ -0.28
PCCB-213ENST00000475214 CALD1Q05682 793 aaKnown RBP13.28□□□□□ -0.28
PCCB-213ENST00000475214 UNC5CLQ8IV45 518 aa13.28□□□□□ -0.28
PCCB-213ENST00000475214 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.28□□□□□ -0.28
PCCB-213ENST00000475214 RGPD1P0DJD0 1748 aa13.27□□□□□ -0.28
PCCB-213ENST00000475214 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.29
PCCB-213ENST00000475214 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
PCCB-213ENST00000475214 SLIT3O75094 1523 aa13.26□□□□□ -0.29
PCCB-213ENST00000475214 LTN1O94822 1766 aa13.26□□□□□ -0.29
PCCB-213ENST00000475214 CCDC125Q86Z20 511 aa13.26□□□□□ -0.29
PCCB-213ENST00000475214 IP6K1Q92551 441 aa13.26□□□□□ -0.29
PCCB-213ENST00000475214 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.26□□□□□ -0.29
PCCB-213ENST00000475214 NFAT5O94916 1531 aa13.25□□□□□ -0.29
PCCB-213ENST00000475214 USP19O94966 1318 aa13.25□□□□□ -0.29
PCCB-213ENST00000475214 IGSF1Q8N6C5 1336 aa13.25□□□□□ -0.29
PCCB-213ENST00000475214 GCP02774 474 aa13.25□□□□□ -0.29
PCCB-213ENST00000475214 CT47B1P0C2W7 299 aaPredicted RBP13.24□□□□□ -0.29
PCCB-213ENST00000475214 AEBP1Q8IUX7 1158 aa13.24□□□□□ -0.29
PCCB-213ENST00000475214 EYA1Q99502 592 aa13.24□□□□□ -0.29
PCCB-213ENST00000475214 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
PCCB-213ENST00000475214 SLIT2O94813 1529 aa13.23□□□□□ -0.29
PCCB-213ENST00000475214 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
PCCB-213ENST00000475214 PHRF1Q9P1Y6 1649 aaKnown RBP13.23□□□□□ -0.29
PCCB-213ENST00000475214 KDRP35968 1356 aa13.22□□□□□ -0.29
PCCB-213ENST00000475214 ARHGEF25Q86VW2 580 aa13.22□□□□□ -0.29
PCCB-213ENST00000475214 LTV1Q96GA3 475 aaPredicted RBP13.22□□□□□ -0.29
PCCB-213ENST00000475214 GLI3P10071 1580 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms