RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
NELFCD-204ENST00000474543 SLKQ9H2G2 1235 aaPredicted RBP18.31■□□□□ 0.52
NELFCD-204ENST00000474543 ANTXR1Q9H6X2 564 aa18.31■□□□□ 0.52
NELFCD-204ENST00000474543 SLAIN2Q9P270 581 aa18.31■□□□□ 0.52
NELFCD-204ENST00000474543 TRIM35Q9UPQ4 493 aa18.31■□□□□ 0.52
NELFCD-204ENST00000474543 COL3A1P02461 1466 aaPredicted RBP18.31■□□□□ 0.52
NELFCD-204ENST00000474543 TMPOP42166 694 aaKnown RBP18.3■□□□□ 0.52
NELFCD-204ENST00000474543 DCCP43146 1447 aa18.3■□□□□ 0.52
NELFCD-204ENST00000474543 MINK1Q8N4C8 1332 aaPredicted RBP18.3■□□□□ 0.52
NELFCD-204ENST00000474543 U2SURPO15042 1029 aaKnown RBP18.3■□□□□ 0.52
NELFCD-204ENST00000474543 GGNBP2Q9H3C7 697 aa18.3■□□□□ 0.52
NELFCD-204ENST00000474543 SMC4Q9NTJ3 1288 aa18.3■□□□□ 0.52
NELFCD-204ENST00000474543 ANKRD26Q9UPS8 1709 aa18.28■□□□□ 0.52
NELFCD-204ENST00000474543 TRIM27P14373 513 aa18.28■□□□□ 0.52
NELFCD-204ENST00000474543 TBC1D2Q9BYX2 928 aa18.28■□□□□ 0.52
NELFCD-204ENST00000474543 SRPK2P78362 688 aaKnown RBP18.28■□□□□ 0.52
NELFCD-204ENST00000474543 SSH1Q8WYL5 1049 aa18.28■□□□□ 0.52
NELFCD-204ENST00000474543 HDAC1Q13547 482 aaPredicted RBP18.27■□□□□ 0.51
NELFCD-204ENST00000474543 NUTM2FA1L443 756 aa18.26■□□□□ 0.51
NELFCD-204ENST00000474543 FYB1O15117 783 aa18.26■□□□□ 0.51
NELFCD-204ENST00000474543 IL16Q14005 1332 aa18.25■□□□□ 0.51
NELFCD-204ENST00000474543 ATF7IPQ6VMQ6 1270 aa18.25■□□□□ 0.51
NELFCD-204ENST00000474543 DDX19BQ9UMR2 479 aa18.25■□□□□ 0.51
NELFCD-204ENST00000474543 CDC42BPGQ6DT37 1551 aa18.25■□□□□ 0.51
NELFCD-204ENST00000474543 ILDR1Q86SU0 546 aaPredicted RBP18.25■□□□□ 0.51
NELFCD-204ENST00000474543 ANO8Q9HCE9 1232 aaPredicted RBP18.25■□□□□ 0.51
NELFCD-204ENST00000474543 CD163L1Q9NR16 1453 aa18.24■□□□□ 0.51
NELFCD-204ENST00000474543 MST1RQ04912 1400 aa18.24■□□□□ 0.51
NELFCD-204ENST00000474543 ITPRIPQ8IWB1 547 aa18.23■□□□□ 0.51
NELFCD-204ENST00000474543 TERF2IPQ9NYB0 399 aa18.23■□□□□ 0.51
NELFCD-204ENST00000474543 NOB1Q9ULX3 412 aaKnown RBP18.23■□□□□ 0.51
NELFCD-204ENST00000474543 ATAD2Q6PL18 1390 aa18.23■□□□□ 0.51
NELFCD-204ENST00000474543 RIPK4P57078 832 aa18.23■□□□□ 0.51
NELFCD-204ENST00000474543 WASLO00401 505 aaPredicted RBP18.22■□□□□ 0.51
NELFCD-204ENST00000474543 SMC5Q8IY18 1101 aa18.22■□□□□ 0.51
NELFCD-204ENST00000474543 C1orf167Q5SNV9 1468 aa18.21■□□□□ 0.51
NELFCD-204ENST00000474543 TMEM57Q8N5G2 664 aa18.21■□□□□ 0.51
NELFCD-204ENST00000474543 C22orf23Q9BZE7 217 aa18.21■□□□□ 0.51
NELFCD-204ENST00000474543 ROBO1Q9Y6N7 1651 aa18.21■□□□□ 0.51
NELFCD-204ENST00000474543 PNPLA6Q8IY17 1366 aa18.2■□□□□ 0.5
NELFCD-204ENST00000474543 DIAPH1O60610 1272 aaKnown RBP18.2■□□□□ 0.5
NELFCD-204ENST00000474543 FMN2Q9NZ56 1722 aa18.2■□□□□ 0.5
NELFCD-204ENST00000474543 ESCO1Q5FWF5 840 aa18.2■□□□□ 0.5
NELFCD-204ENST00000474543 ZBTB40Q9NUA8 1239 aa18.2■□□□□ 0.5
NELFCD-204ENST00000474543 BRINP3Q76B58 766 aa18.19■□□□□ 0.5
NELFCD-204ENST00000474543 ORAI2Q96SN7 254 aa18.19■□□□□ 0.5
NELFCD-204ENST00000474543 CDK19Q9BWU1 502 aa18.19■□□□□ 0.5
NELFCD-204ENST00000474543 MFAP1P55081 439 aaKnown RBP18.18■□□□□ 0.5
NELFCD-204ENST00000474543 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
NELFCD-204ENST00000474543 KIF16BQ96L93 1317 aa18.18■□□□□ 0.5
NELFCD-204ENST00000474543 KIF20BQ96Q89 1820 aa18.18■□□□□ 0.5
NELFCD-204ENST00000474543 IPO8O15397 1037 aaKnown RBP18.17■□□□□ 0.5
NELFCD-204ENST00000474543 HSPA1LP34931 641 aa18.16■□□□□ 0.5
NELFCD-204ENST00000474543 SPRYD3Q8NCJ5 442 aa18.16■□□□□ 0.5
NELFCD-204ENST00000474543 RGPD8O14715 1765 aaPredicted RBP18.16■□□□□ 0.5
NELFCD-204ENST00000474543 ALDH1L2Q3SY69 923 aa18.16■□□□□ 0.5
NELFCD-204ENST00000474543 HDGFL2Q7Z4V5 671 aaPredicted RBP18.16■□□□□ 0.5
NELFCD-204ENST00000474543 FCHSD2O94868 740 aa18.15■□□□□ 0.5
NELFCD-204ENST00000474543 ANKARQ7Z5J8 1434 aa18.14■□□□□ 0.49
NELFCD-204ENST00000474543 NUDT16Q96DE0 195 aaKnown RBP18.14■□□□□ 0.49
NELFCD-204ENST00000474543 CABP1Q9NZU7 370 aa18.14■□□□□ 0.49
NELFCD-204ENST00000474543 PRR36Q9H6K5 1346 aa18.13■□□□□ 0.49
NELFCD-204ENST00000474543 NUCB1Q02818 461 aa18.13■□□□□ 0.49
NELFCD-204ENST00000474543 MCM4P33991 863 aa18.12■□□□□ 0.49
NELFCD-204ENST00000474543 DDX17Q92841 729 aaKnown RBP18.12■□□□□ 0.49
NELFCD-204ENST00000474543 RSPH6AQ9H0K4 717 aa18.12■□□□□ 0.49
NELFCD-204ENST00000474543 CHMP5Q9NZZ3 219 aa18.12■□□□□ 0.49
NELFCD-204ENST00000474543 PHF8Q9UPP1 1060 aa18.12■□□□□ 0.49
NELFCD-204ENST00000474543 BRPF1P55201 1214 aaPredicted RBP18.11■□□□□ 0.49
NELFCD-204ENST00000474543 FAM43AQ8N2R8 423 aa18.11■□□□□ 0.49
NELFCD-204ENST00000474543 FOXO3O43524 673 aa18.11■□□□□ 0.49
NELFCD-204ENST00000474543 PRKAR2BP31323 418 aa18.11■□□□□ 0.49
NELFCD-204ENST00000474543 L1TD1Q5T7N2 865 aaKnown RBP18.11■□□□□ 0.49
NELFCD-204ENST00000474543 POLKQ9UBT6 870 aa18.1■□□□□ 0.49
NELFCD-204ENST00000474543 MAP2P11137 1827 aaKnown RBP18.1■□□□□ 0.49
NELFCD-204ENST00000474543 PPIP5K1Q6PFW1 1433 aa18.1■□□□□ 0.49
NELFCD-204ENST00000474543 PHLPP1O60346 1717 aa18.1■□□□□ 0.49
NELFCD-204ENST00000474543 FBLN1P23142 703 aa18.1■□□□□ 0.49
NELFCD-204ENST00000474543 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
NELFCD-204ENST00000474543 LNPKQ9C0E8 428 aa18.1■□□□□ 0.49
NELFCD-204ENST00000474543 CCDC61Q9Y6R9 512 aa18.1■□□□□ 0.49
NELFCD-204ENST00000474543 ATP7BP35670 1465 aa18.09■□□□□ 0.49
NELFCD-204ENST00000474543 CHD1LQ86WJ1 897 aa18.09■□□□□ 0.49
NELFCD-204ENST00000474543 RBM25P49756 843 aaKnown RBP18.08■□□□□ 0.49
NELFCD-204ENST00000474543 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.08■□□□□ 0.49
NELFCD-204ENST00000474543 NPHP3Q7Z494 1330 aa18.08■□□□□ 0.48
NELFCD-204ENST00000474543 HSCBQ8IWL3 235 aa18.08■□□□□ 0.48
NELFCD-204ENST00000474543 AHDC1Q5TGY3 1603 aaPredicted RBP18.08■□□□□ 0.48
NELFCD-204ENST00000474543 KIF1AQ12756 1690 aa18.07■□□□□ 0.48
NELFCD-204ENST00000474543 NHSL1Q5SYE7 1610 aa18.07■□□□□ 0.48
NELFCD-204ENST00000474543 ITSN1Q15811 1721 aa18.07■□□□□ 0.48
NELFCD-204ENST00000474543 ZBTB7BO15156 539 aaPredicted RBP18.07■□□□□ 0.48
NELFCD-204ENST00000474543 XPCQ01831 940 aaPredicted RBP18.07■□□□□ 0.48
NELFCD-204ENST00000474543 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
NELFCD-204ENST00000474543 PHACTR3Q96KR7 559 aa18.07■□□□□ 0.48
NELFCD-204ENST00000474543 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.07■□□□□ 0.48
NELFCD-204ENST00000474543 VAMP4O75379 141 aa18.06■□□□□ 0.48
NELFCD-204ENST00000474543 NFE2L2Q16236 605 aa18.06■□□□□ 0.48
NELFCD-204ENST00000474543 ZNF692Q9BU19 519 aaPredicted RBP18.06■□□□□ 0.48
NELFCD-204ENST00000474543 MRPL50Q8N5N7 158 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms