RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 IGHDP01880 384 aa23.88■■□□□ 1.41
COL20A1-205ENST00000471582 CALD1Q05682 793 aaKnown RBP23.88■■□□□ 1.41
COL20A1-205ENST00000471582 PMFBP1Q8TBY8 1022 aa23.88■■□□□ 1.41
COL20A1-205ENST00000471582 TTC21BQ7Z4L5 1316 aa23.87■■□□□ 1.41
COL20A1-205ENST00000471582 HSPA2P54652 639 aa23.87■■□□□ 1.41
COL20A1-205ENST00000471582 MVPQ14764 893 aaKnown RBP23.86■■□□□ 1.41
COL20A1-205ENST00000471582 FAM161AQ3B820 660 aa23.86■■□□□ 1.41
COL20A1-205ENST00000471582 ZNF428Q96B54 188 aa23.86■■□□□ 1.41
COL20A1-205ENST00000471582 SMC4Q9NTJ3 1288 aa23.86■■□□□ 1.41
COL20A1-205ENST00000471582 ANKARQ7Z5J8 1434 aa23.85■■□□□ 1.41
COL20A1-205ENST00000471582 SSH2Q76I76 1423 aa23.85■■□□□ 1.41
COL20A1-205ENST00000471582 DZIP1LQ8IYY4 767 aaKnown RBP23.84■■□□□ 1.41
COL20A1-205ENST00000471582 RGPD8O14715 1765 aaPredicted RBP23.84■■□□□ 1.41
COL20A1-205ENST00000471582 FMN2Q9NZ56 1722 aa23.84■■□□□ 1.41
COL20A1-205ENST00000471582 HMOX1P09601 288 aa23.83■■□□□ 1.41
COL20A1-205ENST00000471582 ALDH1L2Q3SY69 923 aa23.83■■□□□ 1.41
COL20A1-205ENST00000471582 SSH1Q8WYL5 1049 aa23.83■■□□□ 1.41
COL20A1-205ENST00000471582 PHACTR3Q96KR7 559 aa23.83■■□□□ 1.41
COL20A1-205ENST00000471582 ZBTB47Q9UFB7 747 aaPredicted RBP23.83■■□□□ 1.41
COL20A1-205ENST00000471582 TNNQ9UQP3 1299 aa23.83■■□□□ 1.41
COL20A1-205ENST00000471582 FTSJ3Q8IY81 847 aaKnown RBP23.82■■□□□ 1.4
COL20A1-205ENST00000471582 KIF16BQ96L93 1317 aa23.82■■□□□ 1.4
COL20A1-205ENST00000471582 LMOD3Q0VAK6 560 aa23.82■■□□□ 1.4
COL20A1-205ENST00000471582 RRS1Q15050 365 aaKnown RBP23.82■■□□□ 1.4
COL20A1-205ENST00000471582 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
COL20A1-205ENST00000471582 ADGRL3Q9HAR2 1447 aa23.81■■□□□ 1.4
COL20A1-205ENST00000471582 TTC21AQ8NDW8 1320 aa23.8■■□□□ 1.4
COL20A1-205ENST00000471582 C8orf34Q49A92 452 aa23.8■■□□□ 1.4
COL20A1-205ENST00000471582 PAK3O75914 559 aaPredicted RBP23.8■■□□□ 1.4
COL20A1-205ENST00000471582 ATF7IPQ6VMQ6 1270 aa23.8■■□□□ 1.4
COL20A1-205ENST00000471582 NPM2Q86SE8 214 aaKnown RBP23.8■■□□□ 1.4
COL20A1-205ENST00000471582 RGS3P49796 1198 aa23.79■■□□□ 1.4
COL20A1-205ENST00000471582 BRPF1P55201 1214 aaPredicted RBP23.79■■□□□ 1.4
COL20A1-205ENST00000471582 IFT57Q9NWB7 429 aa23.79■■□□□ 1.4
COL20A1-205ENST00000471582 PCDHB15Q9Y5E8 787 aa23.79■■□□□ 1.4
COL20A1-205ENST00000471582 TRIM27P14373 513 aa23.78■■□□□ 1.4
COL20A1-205ENST00000471582 NGDNQ8NEJ9 315 aaKnown RBP23.78■■□□□ 1.4
COL20A1-205ENST00000471582 VIRMAQ69YN4 1812 aaKnown RBP23.78■■□□□ 1.4
COL20A1-205ENST00000471582 IPO8O15397 1037 aaKnown RBP23.78■■□□□ 1.4
COL20A1-205ENST00000471582 RWDD1Q9H446 243 aaPredicted RBP23.78■■□□□ 1.4
COL20A1-205ENST00000471582 DLG5Q8TDM6 1919 aa23.78■■□□□ 1.4
COL20A1-205ENST00000471582 GNAI1P63096 354 aa23.77■■□□□ 1.4
COL20A1-205ENST00000471582 ZNF853P0CG23 659 aa23.76■■□□□ 1.39
COL20A1-205ENST00000471582 DDX19BQ9UMR2 479 aa23.76■■□□□ 1.39
COL20A1-205ENST00000471582 STRCQ7RTU9 1775 aa23.76■■□□□ 1.39
COL20A1-205ENST00000471582 RGPD1P0DJD0 1748 aa23.76■■□□□ 1.39
COL20A1-205ENST00000471582 DDRGK1Q96HY6 314 aa23.75■■□□□ 1.39
COL20A1-205ENST00000471582 PEAK1Q9H792 1746 aa23.75■■□□□ 1.39
COL20A1-205ENST00000471582 NOB1Q9ULX3 412 aaKnown RBP23.74■■□□□ 1.39
COL20A1-205ENST00000471582 EIF4A2Q14240 407 aaKnown RBP23.74■■□□□ 1.39
COL20A1-205ENST00000471582 RBM33Q96EV2 1170 aaKnown RBP23.71■■□□□ 1.39
COL20A1-205ENST00000471582 CFAP44Q96MT7 982 aa23.71■■□□□ 1.39
COL20A1-205ENST00000471582 PROSER2Q86WR7 435 aaPredicted RBP23.71■■□□□ 1.39
COL20A1-205ENST00000471582 C14orf37Q86TY3 774 aa23.7■■□□□ 1.38
COL20A1-205ENST00000471582 HDAC1Q13547 482 aaPredicted RBP23.69■■□□□ 1.38
COL20A1-205ENST00000471582 ITPRIPQ8IWB1 547 aa23.69■■□□□ 1.38
COL20A1-205ENST00000471582 ARHGAP45Q92619 1136 aa23.69■■□□□ 1.38
COL20A1-205ENST00000471582 THUMPD2Q9BTF0 503 aaKnown RBP23.69■■□□□ 1.38
COL20A1-205ENST00000471582 LAS1LQ9Y4W2 734 aaKnown RBP23.69■■□□□ 1.38
COL20A1-205ENST00000471582 VAMP4O75379 141 aa23.69■■□□□ 1.38
COL20A1-205ENST00000471582 MBIPQ9NS73 344 aa23.69■■□□□ 1.38
COL20A1-205ENST00000471582 STRCP1A6NGW2 1772 aa23.68■■□□□ 1.38
COL20A1-205ENST00000471582 PIK3C2AO00443 1686 aa23.68■■□□□ 1.38
COL20A1-205ENST00000471582 USP54Q70EL1 1684 aa23.68■■□□□ 1.38
COL20A1-205ENST00000471582 ARHGEF10O15013 1369 aa23.67■■□□□ 1.38
COL20A1-205ENST00000471582 NCOA3Q9Y6Q9 1424 aa23.67■■□□□ 1.38
COL20A1-205ENST00000471582 SULT6B1Q6IMI4 303 aa23.67■■□□□ 1.38
COL20A1-205ENST00000471582 TMEM57Q8N5G2 664 aa23.67■■□□□ 1.38
COL20A1-205ENST00000471582 SBNO1A3KN83 1393 aa23.66■■□□□ 1.38
COL20A1-205ENST00000471582 FLT4P35916 1363 aa23.66■■□□□ 1.38
COL20A1-205ENST00000471582 ZBTB40Q9NUA8 1239 aa23.65■■□□□ 1.38
COL20A1-205ENST00000471582 PDZRN3Q9UPQ7 1066 aa23.65■■□□□ 1.38
COL20A1-205ENST00000471582 MRPL50Q8N5N7 158 aaKnown RBP23.65■■□□□ 1.38
COL20A1-205ENST00000471582 PHF8Q9UPP1 1060 aa23.65■■□□□ 1.38
COL20A1-205ENST00000471582 HSP90AB2PQ58FF8 381 aa23.64■■□□□ 1.37
COL20A1-205ENST00000471582 AEBP1Q8IUX7 1158 aa23.64■■□□□ 1.37
COL20A1-205ENST00000471582 MAP3K19Q56UN5 1328 aa23.63■■□□□ 1.37
COL20A1-205ENST00000471582 CHMP4BQ9H444 224 aaKnown RBP23.63■■□□□ 1.37
COL20A1-205ENST00000471582 KIF24Q5T7B8 1368 aa23.63■■□□□ 1.37
COL20A1-205ENST00000471582 C19orf44Q9H6X5 657 aa23.63■■□□□ 1.37
COL20A1-205ENST00000471582 TMEM94Q12767 1356 aa23.62■■□□□ 1.37
COL20A1-205ENST00000471582 TWISTNBQ3B726 338 aaPredicted RBP23.62■■□□□ 1.37
COL20A1-205ENST00000471582 TSPYL6Q8N831 410 aa23.62■■□□□ 1.37
COL20A1-205ENST00000471582 DCCP43146 1447 aa23.61■■□□□ 1.37
COL20A1-205ENST00000471582 KDRP35968 1356 aa23.61■■□□□ 1.37
COL20A1-205ENST00000471582 FAM83GA6ND36 823 aa23.6■■□□□ 1.37
COL20A1-205ENST00000471582 HAP1P54257 671 aaPredicted RBP23.6■■□□□ 1.37
COL20A1-205ENST00000471582 NLRP6P59044 892 aa23.59■■□□□ 1.37
COL20A1-205ENST00000471582 MARF1Q9Y4F3 1742 aaKnown RBP23.59■■□□□ 1.37
COL20A1-205ENST00000471582 SMC5Q8IY18 1101 aa23.59■■□□□ 1.37
COL20A1-205ENST00000471582 ABCC4O15439 1325 aa23.58■■□□□ 1.36
COL20A1-205ENST00000471582 ESCO1Q5FWF5 840 aa23.57■■□□□ 1.36
COL20A1-205ENST00000471582 SOX12O15370 315 aa23.57■■□□□ 1.36
COL20A1-205ENST00000471582 ABTB2Q8N961 1025 aa23.57■■□□□ 1.36
COL20A1-205ENST00000471582 C8orf58Q8NAV2 365 aa23.57■■□□□ 1.36
COL20A1-205ENST00000471582 KIAA0232Q92628 1395 aa23.57■■□□□ 1.36
COL20A1-205ENST00000471582 CHL1O00533 1208 aa23.56■■□□□ 1.36
COL20A1-205ENST00000471582 IGSF1Q8N6C5 1336 aa23.56■■□□□ 1.36
COL20A1-205ENST00000471582 DCTN1Q14203 1278 aa23.55■■□□□ 1.36
COL20A1-205ENST00000471582 API5Q9BZZ5 524 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms