RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 HMOX1P09601 288 aa12.74□□□□□ -0.37
RRP1B-202ENST00000470886 RPAP2Q8IXW5 612 aaPredicted RBP12.74□□□□□ -0.37
RRP1B-202ENST00000470886 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
RRP1B-202ENST00000470886 ZFYVE16Q7Z3T8 1539 aa12.74□□□□□ -0.37
RRP1B-202ENST00000470886 CCT4P50991 539 aaKnown RBP12.74□□□□□ -0.37
RRP1B-202ENST00000470886 C9orf78Q9NZ63 289 aaPredicted RBP12.74□□□□□ -0.37
RRP1B-202ENST00000470886 PLA2R1Q13018 1463 aa12.73□□□□□ -0.37
RRP1B-202ENST00000470886 CCDC30Q5VVM6 783 aa12.73□□□□□ -0.37
RRP1B-202ENST00000470886 TSR2Q969E8 191 aaKnown RBP12.73□□□□□ -0.37
RRP1B-202ENST00000470886 SRCIN1Q9C0H9 1055 aa12.73□□□□□ -0.37
RRP1B-202ENST00000470886 CALRP27797 417 aaKnown RBP12.73□□□□□ -0.37
RRP1B-202ENST00000470886 TMPOP42166 694 aaKnown RBP12.73□□□□□ -0.37
RRP1B-202ENST00000470886 C20orf194Q5TEA3 1177 aa12.73□□□□□ -0.37
RRP1B-202ENST00000470886 CLASP1Q7Z460 1538 aa12.73□□□□□ -0.37
RRP1B-202ENST00000470886 PSMA5P28066 241 aa12.72□□□□□ -0.37
RRP1B-202ENST00000470886 CNTROBQ8N137 903 aa12.72□□□□□ -0.37
RRP1B-202ENST00000470886 HIP1O00291 1037 aa12.72□□□□□ -0.37
RRP1B-202ENST00000470886 UBTFL1P0CB47 393 aaPredicted RBP12.72□□□□□ -0.37
RRP1B-202ENST00000470886 CSB-PGBD3P0DP91 1061 aa12.72□□□□□ -0.37
RRP1B-202ENST00000470886 PDCP20941 246 aa12.72□□□□□ -0.37
RRP1B-202ENST00000470886 TSPY26PQ9H489 355 aa12.72□□□□□ -0.37
RRP1B-202ENST00000470886 NEURL4Q96JN8 1562 aa12.72□□□□□ -0.37
RRP1B-202ENST00000470886 CAVIN1Q6NZI2 390 aaKnown RBP12.72□□□□□ -0.37
RRP1B-202ENST00000470886 SPHKAPQ2M3C7 1700 aa12.71□□□□□ -0.37
RRP1B-202ENST00000470886 GNAI2P04899 355 aa12.71□□□□□ -0.37
RRP1B-202ENST00000470886 CPLX2Q6PUV4 134 aaKnown RBP12.71□□□□□ -0.37
RRP1B-202ENST00000470886 KIF1BO60333 1816 aa12.71□□□□□ -0.37
RRP1B-202ENST00000470886 G3BP1Q13283 466 aaKnown RBP eCLIP12.71□□□□□ -0.373e-8■■□□□ 12.1
RRP1B-202ENST00000470886 UBE2Q2Q8WVN8 375 aa12.71□□□□□ -0.37
RRP1B-202ENST00000470886 ESPNB1AK53 854 aa12.71□□□□□ -0.38
RRP1B-202ENST00000470886 TAF7LQ5H9L4 462 aa12.71□□□□□ -0.38
RRP1B-202ENST00000470886 MADDQ8WXG6 1647 aa12.7□□□□□ -0.38
RRP1B-202ENST00000470886 NEK4P51957 841 aa12.7□□□□□ -0.38
RRP1B-202ENST00000470886 NFE2L2Q16236 605 aa12.7□□□□□ -0.38
RRP1B-202ENST00000470886 SASS6Q6UVJ0 657 aa12.7□□□□□ -0.38
RRP1B-202ENST00000470886 FAM13BQ9NYF5 915 aa12.7□□□□□ -0.38
RRP1B-202ENST00000470886 WDR33Q9C0J8 1336 aaKnown RBP12.7□□□□□ -0.38
RRP1B-202ENST00000470886 PRAM1Q96QH2 718 aa12.7□□□□□ -0.38
RRP1B-202ENST00000470886 KIAA1210Q9ULL0 1709 aa12.7□□□□□ -0.38
RRP1B-202ENST00000470886 E9PCH4 1651 aa12.69□□□□□ -0.38
RRP1B-202ENST00000470886 DHX8Q14562 1220 aaKnown RBP12.69□□□□□ -0.38
RRP1B-202ENST00000470886 LTV1Q96GA3 475 aaPredicted RBP12.69□□□□□ -0.38
RRP1B-202ENST00000470886 CHMP3Q9Y3E7 222 aa12.69□□□□□ -0.38
RRP1B-202ENST00000470886 ZFYVE9O95405 1425 aa12.69□□□□□ -0.38
RRP1B-202ENST00000470886 RRP9O43818 475 aaKnown RBP12.69□□□□□ -0.38
RRP1B-202ENST00000470886 PLEKHH1Q9ULM0 1364 aa12.69□□□□□ -0.38
RRP1B-202ENST00000470886 NEO1Q92859 1461 aa12.69□□□□□ -0.38
RRP1B-202ENST00000470886 PRPF40AO75400 957 aaKnown RBP12.68□□□□□ -0.38
RRP1B-202ENST00000470886 ERC1Q8IUD2 1116 aa12.68□□□□□ -0.38
RRP1B-202ENST00000470886 GOLGA6L1Q8N7Z2 621 aa12.68□□□□□ -0.38
RRP1B-202ENST00000470886 AEBP1Q8IUX7 1158 aa12.68□□□□□ -0.38
RRP1B-202ENST00000470886 BICD2Q8TD16 824 aa12.68□□□□□ -0.38
RRP1B-202ENST00000470886 TBC1D32Q96NH3 1257 aa12.68□□□□□ -0.38
RRP1B-202ENST00000470886 CDK19Q9BWU1 502 aa12.68□□□□□ -0.38
RRP1B-202ENST00000470886 CLASRPQ8N2M8 674 aaKnown RBP12.68□□□□□ -0.38
RRP1B-202ENST00000470886 TMEM57Q8N5G2 664 aa12.68□□□□□ -0.38
RRP1B-202ENST00000470886 IFT57Q9NWB7 429 aa12.68□□□□□ -0.38
RRP1B-202ENST00000470886 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
RRP1B-202ENST00000470886 R3HCC1Q9Y3T6 440 aaKnown RBP12.68□□□□□ -0.38
RRP1B-202ENST00000470886 KDM2BQ8NHM5 1336 aa12.67□□□□□ -0.38
RRP1B-202ENST00000470886 VPS37CA5D8V6 355 aaPredicted RBP12.67□□□□□ -0.38
RRP1B-202ENST00000470886 POGZQ7Z3K3 1410 aa12.67□□□□□ -0.38
RRP1B-202ENST00000470886 CEP152O94986 1710 aa12.67□□□□□ -0.38
RRP1B-202ENST00000470886 TBC1D2Q9BYX2 928 aa12.67□□□□□ -0.38
RRP1B-202ENST00000470886 HOOK1Q9UJC3 728 aaKnown RBP12.67□□□□□ -0.38
RRP1B-202ENST00000470886 RNF17Q9BXT8 1623 aaKnown RBP12.67□□□□□ -0.38
RRP1B-202ENST00000470886 MAP3K4Q9Y6R4 1608 aa12.67□□□□□ -0.38
RRP1B-202ENST00000470886 GPS2Q13227 327 aa12.66□□□□□ -0.38
RRP1B-202ENST00000470886 CCDC73Q6ZRK6 1079 aa12.66□□□□□ -0.38
RRP1B-202ENST00000470886 LRRCC1Q9C099 1032 aa12.66□□□□□ -0.38
RRP1B-202ENST00000470886 HDAC1Q13547 482 aaPredicted RBP12.66□□□□□ -0.38
RRP1B-202ENST00000470886 FOXD4L6Q3SYB3 417 aaPredicted RBP12.66□□□□□ -0.38
RRP1B-202ENST00000470886 FOXD4L3Q6VB84 417 aaPredicted RBP12.66□□□□□ -0.38
RRP1B-202ENST00000470886 ZSCAN30Q86W11 494 aa12.66□□□□□ -0.38
RRP1B-202ENST00000470886 NAT10Q9H0A0 1025 aaKnown RBP12.66□□□□□ -0.38
RRP1B-202ENST00000470886 EFCAB6Q5THR3 1501 aa12.66□□□□□ -0.38
RRP1B-202ENST00000470886 EIF2S2P20042 333 aaKnown RBP12.65□□□□□ -0.38
RRP1B-202ENST00000470886 BMP2KLQ5H9B9 411 aa12.65□□□□□ -0.38
RRP1B-202ENST00000470886 SSH1Q8WYL5 1049 aa12.65□□□□□ -0.38
RRP1B-202ENST00000470886 SETBP1Q9Y6X0 1596 aa12.65□□□□□ -0.38
RRP1B-202ENST00000470886 LMTK2Q8IWU2 1503 aa12.65□□□□□ -0.38
RRP1B-202ENST00000470886 TPM1P09493 284 aa12.65□□□□□ -0.38
RRP1B-202ENST00000470886 CABP1Q9NZU7 370 aa12.65□□□□□ -0.38
RRP1B-202ENST00000470886 MLH3Q9UHC1 1453 aa12.65□□□□□ -0.38
RRP1B-202ENST00000470886 ANKRD1Q15327 319 aa12.65□□□□□ -0.39
RRP1B-202ENST00000470886 NUTM2FA1L443 756 aa12.64□□□□□ -0.39
RRP1B-202ENST00000470886 CLTCL1P53675 1640 aa12.64□□□□□ -0.39
RRP1B-202ENST00000470886 ERVK-7P63135 1459 aa12.64□□□□□ -0.39
RRP1B-202ENST00000470886 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
RRP1B-202ENST00000470886 ZSCAN31Q96LW9 406 aaPredicted RBP12.63□□□□□ -0.39
RRP1B-202ENST00000470886 C1orf115Q9H7X2 142 aa12.63□□□□□ -0.39
RRP1B-202ENST00000470886 SURF6O75683 361 aaKnown RBP12.63□□□□□ -0.39
RRP1B-202ENST00000470886 SYNE3Q6ZMZ3 975 aa12.63□□□□□ -0.39
RRP1B-202ENST00000470886 SLC4A2P04920 1241 aa12.63□□□□□ -0.39
RRP1B-202ENST00000470886 ARHGAP45Q92619 1136 aa12.63□□□□□ -0.39
RRP1B-202ENST00000470886 ZNF521Q96K83 1311 aa12.63□□□□□ -0.39
RRP1B-202ENST00000470886 TRMT2AQ8IZ69 625 aaKnown RBP12.63□□□□□ -0.39
RRP1B-202ENST00000470886 ABCA9Q8IUA7 1624 aa12.62□□□□□ -0.39
RRP1B-202ENST00000470886 TRIM29Q14134 588 aa12.62□□□□□ -0.39
RRP1B-202ENST00000470886 ARGLU1Q9NWB6 273 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms