RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 DLG5Q8TDM6 1919 aa17.21■□□□□ 0.35
BRCA1-209ENST00000470026 RBM25P49756 843 aaKnown RBP17.21■□□□□ 0.35
BRCA1-209ENST00000470026 GNAI1P63096 354 aa17.21■□□□□ 0.35
BRCA1-209ENST00000470026 CHD1LQ86WJ1 897 aa17.2■□□□□ 0.34
BRCA1-209ENST00000470026 CPS1P31327 1500 aa17.2■□□□□ 0.34
BRCA1-209ENST00000470026 ABCC4O15439 1325 aa17.2■□□□□ 0.34
BRCA1-209ENST00000470026 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
BRCA1-209ENST00000470026 EMILIN1Q9Y6C2 1016 aa17.2■□□□□ 0.34
BRCA1-209ENST00000470026 NCOA3Q9Y6Q9 1424 aa17.2■□□□□ 0.34
BRCA1-209ENST00000470026 METP08581 1390 aa17.19■□□□□ 0.34
BRCA1-209ENST00000470026 NRKQ7Z2Y5 1582 aa17.19■□□□□ 0.34
BRCA1-209ENST00000470026 FAM69CQ0P6D2 419 aa17.18■□□□□ 0.34
BRCA1-209ENST00000470026 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
BRCA1-209ENST00000470026 HMOX1P09601 288 aa17.18■□□□□ 0.34
BRCA1-209ENST00000470026 BMP2KLQ5H9B9 411 aa17.18■□□□□ 0.34
BRCA1-209ENST00000470026 NME9Q86XW9 330 aa17.18■□□□□ 0.34
BRCA1-209ENST00000470026 TSPYL6Q8N831 410 aa17.18■□□□□ 0.34
BRCA1-209ENST00000470026 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.18■□□□□ 0.34
BRCA1-209ENST00000470026 MBIPQ9NS73 344 aa17.18■□□□□ 0.34
BRCA1-209ENST00000470026 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
BRCA1-209ENST00000470026 LMOD3Q0VAK6 560 aa17.17■□□□□ 0.34
BRCA1-209ENST00000470026 SNX21Q969T3 373 aa17.17■□□□□ 0.34
BRCA1-209ENST00000470026 CFAP44Q96MT7 982 aa17.17■□□□□ 0.34
BRCA1-209ENST00000470026 THUMPD2Q9BTF0 503 aaKnown RBP17.17■□□□□ 0.34
BRCA1-209ENST00000470026 ITSN1Q15811 1721 aa17.16■□□□□ 0.34
BRCA1-209ENST00000470026 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
BRCA1-209ENST00000470026 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
BRCA1-209ENST00000470026 DDIT3P35638 169 aa17.15■□□□□ 0.34
BRCA1-209ENST00000470026 NUDT16Q96DE0 195 aaKnown RBP17.15■□□□□ 0.34
BRCA1-209ENST00000470026 ZNF692Q9BU19 519 aaPredicted RBP17.15■□□□□ 0.34
BRCA1-209ENST00000470026 CCDC61Q9Y6R9 512 aa17.15■□□□□ 0.34
BRCA1-209ENST00000470026 TSPOAP1O95153 1857 aa17.15■□□□□ 0.34
BRCA1-209ENST00000470026 CYB5RLQ6IPT4 315 aa17.14■□□□□ 0.33
BRCA1-209ENST00000470026 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
BRCA1-209ENST00000470026 MCM4P33991 863 aa17.14■□□□□ 0.33
BRCA1-209ENST00000470026 SIRT2Q8IXJ6 389 aa17.14■□□□□ 0.33
BRCA1-209ENST00000470026 COG3Q96JB2 828 aa17.14■□□□□ 0.33
BRCA1-209ENST00000470026 TWISTNBQ3B726 338 aaPredicted RBP17.13■□□□□ 0.33
BRCA1-209ENST00000470026 API5Q9BZZ5 524 aaKnown RBP17.12■□□□□ 0.33
BRCA1-209ENST00000470026 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
BRCA1-209ENST00000470026 TXNDC2Q86VQ3 553 aa17.11■□□□□ 0.33
BRCA1-209ENST00000470026 HSCBQ8IWL3 235 aa17.11■□□□□ 0.33
BRCA1-209ENST00000470026 C8orf58Q8NAV2 365 aa17.11■□□□□ 0.33
BRCA1-209ENST00000470026 TOPAZ1Q8N9V7 1692 aa17.11■□□□□ 0.33
BRCA1-209ENST00000470026 PRR36Q9H6K5 1346 aa17.1■□□□□ 0.33
BRCA1-209ENST00000470026 L1TD1Q5T7N2 865 aaKnown RBP17.1■□□□□ 0.33
BRCA1-209ENST00000470026 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
BRCA1-209ENST00000470026 KIF2CQ99661 725 aa17.09■□□□□ 0.33
BRCA1-209ENST00000470026 NALCNQ8IZF0 1738 aa17.09■□□□□ 0.33
BRCA1-209ENST00000470026 RRS1Q15050 365 aaKnown RBP17.09■□□□□ 0.33
BRCA1-209ENST00000470026 RGPD1P0DJD0 1748 aa17.09■□□□□ 0.33
BRCA1-209ENST00000470026 OVOS2A0A0J9YW53 1432 aa17.08■□□□□ 0.33
BRCA1-209ENST00000470026 OVOS2Q6IE36 1432 aa17.08■□□□□ 0.33
BRCA1-209ENST00000470026 FSD2A1L4K1 749 aa17.08■□□□□ 0.33
BRCA1-209ENST00000470026 HDGFP51858 240 aaKnown RBP17.08■□□□□ 0.33
BRCA1-209ENST00000470026 NCKAP5LQ9HCH0 1330 aa17.08■□□□□ 0.32
BRCA1-209ENST00000470026 C1orf115Q9H7X2 142 aa17.08■□□□□ 0.32
BRCA1-209ENST00000470026 UBR1Q8IWV7 1749 aa17.07■□□□□ 0.32
BRCA1-209ENST00000470026 RGS12O14924 1447 aa17.07■□□□□ 0.32
BRCA1-209ENST00000470026 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
BRCA1-209ENST00000470026 CIZ1Q9ULV3 898 aaPredicted RBP17.07■□□□□ 0.32
BRCA1-209ENST00000470026 ELL2O00472 640 aaPredicted RBP17.06■□□□□ 0.32
BRCA1-209ENST00000470026 SPRYD3Q8NCJ5 442 aa17.06■□□□□ 0.32
BRCA1-209ENST00000470026 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
BRCA1-209ENST00000470026 KIAA0232Q92628 1395 aa17.06■□□□□ 0.32
BRCA1-209ENST00000470026 TMEM2Q9UHN6 1383 aa17.06■□□□□ 0.32
BRCA1-209ENST00000470026 FAM83GA6ND36 823 aa17.06■□□□□ 0.32
BRCA1-209ENST00000470026 FAM43AQ8N2R8 423 aa17.06■□□□□ 0.32
BRCA1-209ENST00000470026 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
BRCA1-209ENST00000470026 ROBO2Q9HCK4 1378 aa17.05■□□□□ 0.32
BRCA1-209ENST00000470026 TBC1D9Q6ZT07 1266 aa17.05■□□□□ 0.32
BRCA1-209ENST00000470026 DCTPP1Q9H773 170 aa17.05■□□□□ 0.32
BRCA1-209ENST00000470026 CHL1O00533 1208 aa17.05■□□□□ 0.32
BRCA1-209ENST00000470026 EIF4A2Q14240 407 aaKnown RBP17.05■□□□□ 0.32
BRCA1-209ENST00000470026 ATP10DQ9P241 1426 aa17.04■□□□□ 0.32
BRCA1-209ENST00000470026 PEAK1Q9H792 1746 aa17.04■□□□□ 0.32
BRCA1-209ENST00000470026 USP31Q70CQ4 1352 aa17.04■□□□□ 0.32
BRCA1-209ENST00000470026 TNRQ92752 1358 aa17.04■□□□□ 0.32
BRCA1-209ENST00000470026 PLEKHG3A1L390 1219 aa17.04■□□□□ 0.32
BRCA1-209ENST00000470026 HAP1P54257 671 aaPredicted RBP17.04■□□□□ 0.32
BRCA1-209ENST00000470026 TTC21BQ7Z4L5 1316 aa17.04■□□□□ 0.32
BRCA1-209ENST00000470026 MLECQ14165 292 aa17.03■□□□□ 0.32
BRCA1-209ENST00000470026 DDX11L8A8MPP1 907 aa17.03■□□□□ 0.32
BRCA1-209ENST00000470026 DCTN1Q14203 1278 aa17.03■□□□□ 0.32
BRCA1-209ENST00000470026 SSH2Q76I76 1423 aa17.02■□□□□ 0.32
BRCA1-209ENST00000470026 TRAK2O60296 914 aa17.02■□□□□ 0.32
BRCA1-209ENST00000470026 USP6P35125 1406 aa17.02■□□□□ 0.31
BRCA1-209ENST00000470026 EIF5BO60841 1220 aaKnown RBP17.02■□□□□ 0.31
BRCA1-209ENST00000470026 AEBP1Q8IUX7 1158 aa17.02■□□□□ 0.31
BRCA1-209ENST00000470026 PLEKHM2Q8IWE5 1019 aa17.02■□□□□ 0.31
BRCA1-209ENST00000470026 CDC45O75419 566 aa17.01■□□□□ 0.31
BRCA1-209ENST00000470026 GSPT1P15170 499 aaKnown RBP17.01■□□□□ 0.31
BRCA1-209ENST00000470026 ANKRD44Q8N8A2 993 aa17.01■□□□□ 0.31
BRCA1-209ENST00000470026 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
BRCA1-209ENST00000470026 CRB1P82279 1406 aa17■□□□□ 0.31
BRCA1-209ENST00000470026 RAB3GAP1Q15042 981 aa17■□□□□ 0.31
BRCA1-209ENST00000470026 RPAP2Q8IXW5 612 aaPredicted RBP17■□□□□ 0.31
BRCA1-209ENST00000470026 PTPRCP08575 1304 aa17■□□□□ 0.31
BRCA1-209ENST00000470026 PLEKHG1Q9ULL1 1385 aa17■□□□□ 0.31
BRCA1-209ENST00000470026 GOLGA6L3A6NEY3 463 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms