RNA–Protein interactions for RNA: ENST00000470019.5

PTK7-208, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 5

Gene PTK7, Length 4,016 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-208ENST00000470019 CHD1LQ86WJ1 897 aa18.28■□□□□ 0.52
PTK7-208ENST00000470019 CHMP4AQ9BY43 222 aa18.28■□□□□ 0.52
PTK7-208ENST00000470019 RSPH6AQ9H0K4 717 aa18.28■□□□□ 0.52
PTK7-208ENST00000470019 ABCC3O15438 1527 aa18.28■□□□□ 0.52
PTK7-208ENST00000470019 TET3O43151 1660 aa18.27■□□□□ 0.52
PTK7-208ENST00000470019 GNAT3A8MTJ3 354 aa18.27■□□□□ 0.52
PTK7-208ENST00000470019 CCDC27Q2M243 656 aa18.27■□□□□ 0.52
PTK7-208ENST00000470019 PLEKHO1Q53GL0 409 aaPredicted RBP18.27■□□□□ 0.52
PTK7-208ENST00000470019 E9PCH4 1651 aa18.27■□□□□ 0.52
PTK7-208ENST00000470019 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.52
PTK7-208ENST00000470019 SYTL4Q96C24 671 aaPredicted RBP18.27■□□□□ 0.51
PTK7-208ENST00000470019 STRN4Q9NRL3 753 aa18.27■□□□□ 0.51
PTK7-208ENST00000470019 EIF5BO60841 1220 aaKnown RBP18.26■□□□□ 0.51
PTK7-208ENST00000470019 ARAP3Q8WWN8 1544 aa18.26■□□□□ 0.51
PTK7-208ENST00000470019 MYOM2P54296 1465 aa18.26■□□□□ 0.51
PTK7-208ENST00000470019 NFKBIBQ15653 356 aa18.26■□□□□ 0.51
PTK7-208ENST00000470019 SURF6O75683 361 aaKnown RBP18.25■□□□□ 0.51
PTK7-208ENST00000470019 FOXD4L6Q3SYB3 417 aaPredicted RBP18.25■□□□□ 0.51
PTK7-208ENST00000470019 FOXD4L3Q6VB84 417 aaPredicted RBP18.25■□□□□ 0.51
PTK7-208ENST00000470019 ZMYM4Q5VZL5 1548 aa18.25■□□□□ 0.51
PTK7-208ENST00000470019 SMARCA5O60264 1052 aaPredicted RBP18.25■□□□□ 0.51
PTK7-208ENST00000470019 MAP3K19Q56UN5 1328 aa18.25■□□□□ 0.51
PTK7-208ENST00000470019 ALDH1L2Q3SY69 923 aa18.25■□□□□ 0.51
PTK7-208ENST00000470019 EXOC6BQ9Y2D4 811 aa18.25■□□□□ 0.51
PTK7-208ENST00000470019 ABCA9Q8IUA7 1624 aa18.24■□□□□ 0.51
PTK7-208ENST00000470019 ANXA1P04083 346 aa18.24■□□□□ 0.51
PTK7-208ENST00000470019 KIF1BO60333 1816 aa18.23■□□□□ 0.51
PTK7-208ENST00000470019 ANO2Q9NQ90 1003 aa18.23■□□□□ 0.51
PTK7-208ENST00000470019 RIC3Q7Z5B4 369 aa18.23■□□□□ 0.51
PTK7-208ENST00000470019 TMEM2Q9UHN6 1383 aa18.23■□□□□ 0.51
PTK7-208ENST00000470019 KDM5AP29375 1690 aaKnown RBP18.23■□□□□ 0.51
PTK7-208ENST00000470019 IL13P35225 146 aa18.22■□□□□ 0.51
PTK7-208ENST00000470019 NEXNQ0ZGT2 675 aa18.22■□□□□ 0.51
PTK7-208ENST00000470019 GCC1Q96CN9 775 aa18.22■□□□□ 0.51
PTK7-208ENST00000470019 FRAT2O75474 233 aaPredicted RBP18.22■□□□□ 0.51
PTK7-208ENST00000470019 MTHFSDQ2M296 383 aaKnown RBP18.22■□□□□ 0.51
PTK7-208ENST00000470019 VAMP4O75379 141 aa18.22■□□□□ 0.51
PTK7-208ENST00000470019 MYL6BP14649 208 aa18.22■□□□□ 0.51
PTK7-208ENST00000470019 RNF17Q9BXT8 1623 aaKnown RBP18.22■□□□□ 0.51
PTK7-208ENST00000470019 BTBD11A6QL63 1104 aa18.21■□□□□ 0.51
PTK7-208ENST00000470019 GNAI2P04899 355 aa18.21■□□□□ 0.51
PTK7-208ENST00000470019 LRRC59Q96AG4 307 aaKnown RBP18.21■□□□□ 0.51
PTK7-208ENST00000470019 EYA1Q99502 592 aa18.21■□□□□ 0.51
PTK7-208ENST00000470019 IL1RAPL2Q9NP60 686 aa18.21■□□□□ 0.51
PTK7-208ENST00000470019 TBX22Q9Y458 520 aa18.21■□□□□ 0.51
PTK7-208ENST00000470019 DDX54Q8TDD1 881 aaKnown RBP18.21■□□□□ 0.51
PTK7-208ENST00000470019 NPHP1O15259 732 aa18.2■□□□□ 0.5
PTK7-208ENST00000470019 GNAI3P08754 354 aa18.2■□□□□ 0.5
PTK7-208ENST00000470019 HSPA2P54652 639 aa18.2■□□□□ 0.5
PTK7-208ENST00000470019 CHRNA2Q15822 529 aa18.2■□□□□ 0.5
PTK7-208ENST00000470019 SPHKAPQ2M3C7 1700 aa18.2■□□□□ 0.5
PTK7-208ENST00000470019 IL16Q14005 1332 aa18.2■□□□□ 0.5
PTK7-208ENST00000470019 ZNF521Q96K83 1311 aa18.2■□□□□ 0.5
PTK7-208ENST00000470019 PRDM11Q9NQV5 511 aa18.19■□□□□ 0.5
PTK7-208ENST00000470019 CFAP74Q9C0B2 1584 aa18.19■□□□□ 0.5
PTK7-208ENST00000470019 KRT28Q7Z3Y7 464 aa18.19■□□□□ 0.5
PTK7-208ENST00000470019 CDC45O75419 566 aa18.18■□□□□ 0.5
PTK7-208ENST00000470019 TAF7Q15545 349 aaPredicted RBP18.18■□□□□ 0.5
PTK7-208ENST00000470019 KCNH5Q8NCM2 988 aa18.18■□□□□ 0.5
PTK7-208ENST00000470019 TAF7LQ5H9L4 462 aa18.18■□□□□ 0.5
PTK7-208ENST00000470019 CABLES1Q8TDN4 633 aa18.18■□□□□ 0.5
PTK7-208ENST00000470019 MAP3K4Q9Y6R4 1608 aa18.18■□□□□ 0.5
PTK7-208ENST00000470019 DDX58O95786 925 aaKnown RBP18.18■□□□□ 0.5
PTK7-208ENST00000470019 MAP4K4O95819 1239 aaPredicted RBP18.18■□□□□ 0.5
PTK7-208ENST00000470019 TOM1L2Q6ZVM7 507 aa18.18■□□□□ 0.5
PTK7-208ENST00000470019 ORAI2Q96SN7 254 aa18.18■□□□□ 0.5
PTK7-208ENST00000470019 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
PTK7-208ENST00000470019 GORABQ5T7V8 394 aa18.17■□□□□ 0.5
PTK7-208ENST00000470019 ST18O60284 1047 aa18.17■□□□□ 0.5
PTK7-208ENST00000470019 GBP4Q96PP9 640 aa18.17■□□□□ 0.5
PTK7-208ENST00000470019 MADDQ8WXG6 1647 aa18.17■□□□□ 0.5
PTK7-208ENST00000470019 SEC24BO95487 1268 aa18.17■□□□□ 0.5
PTK7-208ENST00000470019 CCT4P50991 539 aaKnown RBP18.17■□□□□ 0.5
PTK7-208ENST00000470019 GPATCH3Q96I76 525 aa18.17■□□□□ 0.5
PTK7-208ENST00000470019 SRCIN1Q9C0H9 1055 aa18.16■□□□□ 0.5
PTK7-208ENST00000470019 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
PTK7-208ENST00000470019 IFIT2P09913 472 aaKnown RBP18.16■□□□□ 0.5
PTK7-208ENST00000470019 INTS3Q68E01 1043 aaKnown RBP18.16■□□□□ 0.5
PTK7-208ENST00000470019 MEIS3Q99687 375 aa18.16■□□□□ 0.5
PTK7-208ENST00000470019 CEP152O94986 1710 aa18.16■□□□□ 0.5
PTK7-208ENST00000470019 C8orf34Q49A92 452 aa18.16■□□□□ 0.5
PTK7-208ENST00000470019 MRPL50Q8N5N7 158 aaKnown RBP18.16■□□□□ 0.5
PTK7-208ENST00000470019 TRIM44Q96DX7 344 aaPredicted RBP18.16■□□□□ 0.5
PTK7-208ENST00000470019 SYNMO15061 1565 aa18.16■□□□□ 0.5
PTK7-208ENST00000470019 PRR36Q9H6K5 1346 aa18.15■□□□□ 0.5
PTK7-208ENST00000470019 REC8O95072 547 aa18.15■□□□□ 0.5
PTK7-208ENST00000470019 PLCB2Q00722 1185 aa18.15■□□□□ 0.5
PTK7-208ENST00000470019 SIL1Q9H173 461 aa18.15■□□□□ 0.5
PTK7-208ENST00000470019 TSHZ3Q63HK5 1081 aa18.14■□□□□ 0.5
PTK7-208ENST00000470019 ROBO2Q9HCK4 1378 aa18.14■□□□□ 0.5
PTK7-208ENST00000470019 SRGAP3O43295 1099 aa18.14■□□□□ 0.49
PTK7-208ENST00000470019 FLIIQ13045 1269 aa18.14■□□□□ 0.49
PTK7-208ENST00000470019 EDC4Q6P2E9 1401 aaKnown RBP18.14■□□□□ 0.49
PTK7-208ENST00000470019 G3BP1Q13283 466 aaKnown RBP eCLIP18.14■□□□□ 0.492e-11■□□□□ 8.4
PTK7-208ENST00000470019 DIAPH3Q9NSV4 1193 aa18.14■□□□□ 0.49
PTK7-208ENST00000470019 TTC21AQ8NDW8 1320 aa18.13■□□□□ 0.49
PTK7-208ENST00000470019 GSE1Q14687 1217 aa18.13■□□□□ 0.49
PTK7-208ENST00000470019 TRMT2AQ8IZ69 625 aaKnown RBP18.13■□□□□ 0.49
PTK7-208ENST00000470019 PLEKHF1Q96S99 279 aa18.13■□□□□ 0.49
PTK7-208ENST00000470019 PPRC1Q5VV67 1664 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms