RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 SMC4Q9NTJ3 1288 aa18.02■□□□□ 0.48
SMARCD3-205ENST00000469154 PPIP5K1Q6PFW1 1433 aa18.02■□□□□ 0.48
SMARCD3-205ENST00000469154 U2SURPO15042 1029 aaKnown RBP18.02■□□□□ 0.47
SMARCD3-205ENST00000469154 ADGRL3Q9HAR2 1447 aa18.02■□□□□ 0.47
SMARCD3-205ENST00000469154 NALCNQ8IZF0 1738 aa18.01■□□□□ 0.47
SMARCD3-205ENST00000469154 TMEM94Q12767 1356 aa18.01■□□□□ 0.47
SMARCD3-205ENST00000469154 EXOSC9Q06265 439 aaKnown RBP18.01■□□□□ 0.47
SMARCD3-205ENST00000469154 TSR2Q969E8 191 aaKnown RBP18.01■□□□□ 0.47
SMARCD3-205ENST00000469154 PNNQ9H307 717 aaKnown RBP18.01■□□□□ 0.47
SMARCD3-205ENST00000469154 GGNBP2Q9H3C7 697 aa18.01■□□□□ 0.47
SMARCD3-205ENST00000469154 TRIM35Q9UPQ4 493 aa18.01■□□□□ 0.47
SMARCD3-205ENST00000469154 DDX19BQ9UMR2 479 aa18■□□□□ 0.47
SMARCD3-205ENST00000469154 HDAC1Q13547 482 aaPredicted RBP17.99■□□□□ 0.47
SMARCD3-205ENST00000469154 HDGFL2Q7Z4V5 671 aaPredicted RBP17.99■□□□□ 0.47
SMARCD3-205ENST00000469154 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
SMARCD3-205ENST00000469154 FYB1O15117 783 aa17.98■□□□□ 0.47
SMARCD3-205ENST00000469154 TRIM27P14373 513 aa17.98■□□□□ 0.47
SMARCD3-205ENST00000469154 ATF7IPQ6VMQ6 1270 aa17.98■□□□□ 0.47
SMARCD3-205ENST00000469154 PNPLA6Q8IY17 1366 aa17.98■□□□□ 0.47
SMARCD3-205ENST00000469154 SSH1Q8WYL5 1049 aa17.97■□□□□ 0.47
SMARCD3-205ENST00000469154 C19orf44Q9H6X5 657 aa17.97■□□□□ 0.47
SMARCD3-205ENST00000469154 LRRC7Q96NW7 1537 aa17.96■□□□□ 0.47
SMARCD3-205ENST00000469154 KIF16BQ96L93 1317 aa17.96■□□□□ 0.47
SMARCD3-205ENST00000469154 DIAPH1O60610 1272 aaKnown RBP17.96■□□□□ 0.47
SMARCD3-205ENST00000469154 ITPRIPQ8IWB1 547 aa17.95■□□□□ 0.46
SMARCD3-205ENST00000469154 ACEP12821 1306 aa17.95■□□□□ 0.46
SMARCD3-205ENST00000469154 RIPK4P57078 832 aa17.94■□□□□ 0.46
SMARCD3-205ENST00000469154 BRPF3Q9ULD4 1205 aa17.94■□□□□ 0.46
SMARCD3-205ENST00000469154 PLEKHG3A1L390 1219 aa17.94■□□□□ 0.46
SMARCD3-205ENST00000469154 IPO8O15397 1037 aaKnown RBP17.94■□□□□ 0.46
SMARCD3-205ENST00000469154 ANTXR1Q9H6X2 564 aa17.94■□□□□ 0.46
SMARCD3-205ENST00000469154 FMN2Q9NZ56 1722 aa17.94■□□□□ 0.46
SMARCD3-205ENST00000469154 CPSF1Q10570 1443 aaKnown RBP17.94■□□□□ 0.46
SMARCD3-205ENST00000469154 ANKARQ7Z5J8 1434 aa17.94■□□□□ 0.46
SMARCD3-205ENST00000469154 SLKQ9H2G2 1235 aaPredicted RBP17.93■□□□□ 0.46
SMARCD3-205ENST00000469154 RGPD8O14715 1765 aaPredicted RBP17.93■□□□□ 0.46
SMARCD3-205ENST00000469154 ALDH1L2Q3SY69 923 aa17.93■□□□□ 0.46
SMARCD3-205ENST00000469154 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.93■□□□□ 0.46
SMARCD3-205ENST00000469154 TBC1D2Q9BYX2 928 aa17.93■□□□□ 0.46
SMARCD3-205ENST00000469154 NOB1Q9ULX3 412 aaKnown RBP17.93■□□□□ 0.46
SMARCD3-205ENST00000469154 ATF3P18847 181 aa17.92■□□□□ 0.46
SMARCD3-205ENST00000469154 SMC5Q8IY18 1101 aa17.92■□□□□ 0.46
SMARCD3-205ENST00000469154 NGDNQ8NEJ9 315 aaKnown RBP17.92■□□□□ 0.46
SMARCD3-205ENST00000469154 TOPAZ1Q8N9V7 1692 aa17.92■□□□□ 0.46
SMARCD3-205ENST00000469154 NCOA3Q9Y6Q9 1424 aa17.91■□□□□ 0.46
SMARCD3-205ENST00000469154 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
SMARCD3-205ENST00000469154 ZNF692Q9BU19 519 aaPredicted RBP17.91■□□□□ 0.46
SMARCD3-205ENST00000469154 FCHSD2O94868 740 aa17.91■□□□□ 0.46
SMARCD3-205ENST00000469154 MAP2P11137 1827 aaKnown RBP17.91■□□□□ 0.46
SMARCD3-205ENST00000469154 TMEM57Q8N5G2 664 aa17.9■□□□□ 0.46
SMARCD3-205ENST00000469154 RTN4Q9NQC3 1192 aaKnown RBP17.9■□□□□ 0.46
SMARCD3-205ENST00000469154 MSH6P52701 1360 aa17.9■□□□□ 0.46
SMARCD3-205ENST00000469154 ZNF428Q96B54 188 aa17.9■□□□□ 0.46
SMARCD3-205ENST00000469154 ORAI2Q96SN7 254 aa17.89■□□□□ 0.45
SMARCD3-205ENST00000469154 C22orf23Q9BZE7 217 aa17.89■□□□□ 0.45
SMARCD3-205ENST00000469154 ZBTB40Q9NUA8 1239 aa17.89■□□□□ 0.45
SMARCD3-205ENST00000469154 PHF8Q9UPP1 1060 aa17.89■□□□□ 0.45
SMARCD3-205ENST00000469154 CADPS2Q86UW7 1296 aa17.88■□□□□ 0.45
SMARCD3-205ENST00000469154 EDC4Q6P2E9 1401 aaKnown RBP17.88■□□□□ 0.45
SMARCD3-205ENST00000469154 ITSN1Q15811 1721 aa17.88■□□□□ 0.45
SMARCD3-205ENST00000469154 BRPF1P55201 1214 aaPredicted RBP17.87■□□□□ 0.45
SMARCD3-205ENST00000469154 XIRP1Q702N8 1843 aaKnown RBP17.87■□□□□ 0.45
SMARCD3-205ENST00000469154 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
SMARCD3-205ENST00000469154 DCCP43146 1447 aa17.86■□□□□ 0.45
SMARCD3-205ENST00000469154 MFAP1P55081 439 aaKnown RBP17.86■□□□□ 0.45
SMARCD3-205ENST00000469154 USP6P35125 1406 aa17.86■□□□□ 0.45
SMARCD3-205ENST00000469154 C1orf167Q5SNV9 1468 aa17.86■□□□□ 0.45
SMARCD3-205ENST00000469154 NME9Q86XW9 330 aa17.86■□□□□ 0.45
SMARCD3-205ENST00000469154 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
SMARCD3-205ENST00000469154 CHMP4BQ9H444 224 aaKnown RBP17.85■□□□□ 0.45
SMARCD3-205ENST00000469154 AKAP12Q02952 1782 aa17.85■□□□□ 0.45
SMARCD3-205ENST00000469154 PRKAR2BP31323 418 aa17.84■□□□□ 0.45
SMARCD3-205ENST00000469154 MST1RQ04912 1400 aa17.84■□□□□ 0.45
SMARCD3-205ENST00000469154 NUCB1Q02818 461 aa17.84■□□□□ 0.45
SMARCD3-205ENST00000469154 TTC21BQ7Z4L5 1316 aa17.84■□□□□ 0.45
SMARCD3-205ENST00000469154 MON2Q7Z3U7 1717 aa17.84■□□□□ 0.45
SMARCD3-205ENST00000469154 FOXO3O43524 673 aa17.83■□□□□ 0.45
SMARCD3-205ENST00000469154 ZRANB1Q9UGI0 708 aa17.83■□□□□ 0.45
SMARCD3-205ENST00000469154 CDK12Q9NYV4 1490 aaPredicted RBP17.83■□□□□ 0.44
SMARCD3-205ENST00000469154 NFE2L2Q16236 605 aa17.83■□□□□ 0.44
SMARCD3-205ENST00000469154 POLKQ9UBT6 870 aa17.83■□□□□ 0.44
SMARCD3-205ENST00000469154 DLG5Q8TDM6 1919 aa17.83■□□□□ 0.44
SMARCD3-205ENST00000469154 L1TD1Q5T7N2 865 aaKnown RBP17.82■□□□□ 0.44
SMARCD3-205ENST00000469154 CHMP5Q9NZZ3 219 aa17.82■□□□□ 0.44
SMARCD3-205ENST00000469154 PSME1Q06323 249 aa17.81■□□□□ 0.44
SMARCD3-205ENST00000469154 ARHGAP45Q92619 1136 aa17.81■□□□□ 0.44
SMARCD3-205ENST00000469154 HSCBQ8IWL3 235 aa17.81■□□□□ 0.44
SMARCD3-205ENST00000469154 XPCQ01831 940 aaPredicted RBP17.8■□□□□ 0.44
SMARCD3-205ENST00000469154 SSH2Q76I76 1423 aa17.8■□□□□ 0.44
SMARCD3-205ENST00000469154 GNAI1P63096 354 aa17.8■□□□□ 0.44
SMARCD3-205ENST00000469154 CHD1LQ86WJ1 897 aa17.79■□□□□ 0.44
SMARCD3-205ENST00000469154 IFT57Q9NWB7 429 aa17.79■□□□□ 0.44
SMARCD3-205ENST00000469154 RBM25P49756 843 aaKnown RBP17.79■□□□□ 0.44
SMARCD3-205ENST00000469154 MRPL50Q8N5N7 158 aaKnown RBP17.79■□□□□ 0.44
SMARCD3-205ENST00000469154 GCC1Q96CN9 775 aa17.79■□□□□ 0.44
SMARCD3-205ENST00000469154 SLAIN2Q9P270 581 aa17.79■□□□□ 0.44
SMARCD3-205ENST00000469154 LTBP4Q8N2S1 1624 aa17.78■□□□□ 0.44
SMARCD3-205ENST00000469154 NRKQ7Z2Y5 1582 aa17.78■□□□□ 0.44
SMARCD3-205ENST00000469154 COG3Q96JB2 828 aa17.78■□□□□ 0.44
SMARCD3-205ENST00000469154 AATKQ6ZMQ8 1374 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms