RNA–Protein interactions for RNA: ENST00000468608.1

PARP1-205, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3

Gene PARP1, Length 438 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-205ENST00000468608 PXDNQ92626 1479 aa7.7□□□□□ -1.18
PARP1-205ENST00000468608 KNDC1Q76NI1 1749 aa7.7□□□□□ -1.18
PARP1-205ENST00000468608 GOLGA2Q08379 1002 aa7.7□□□□□ -1.18
PARP1-205ENST00000468608 LMOD2Q6P5Q4 547 aa7.7□□□□□ -1.18
PARP1-205ENST00000468608 TMEM106CQ9BVX2 250 aa7.7□□□□□ -1.18
PARP1-205ENST00000468608 TRPM1Q7Z4N2 1603 aa7.7□□□□□ -1.18
PARP1-205ENST00000468608 KIAA1210Q9ULL0 1709 aa7.69□□□□□ -1.18
PARP1-205ENST00000468608 CDK12Q9NYV4 1490 aaPredicted RBP7.69□□□□□ -1.18
PARP1-205ENST00000468608 C11orf95C9JLR9 678 aaPredicted RBP7.69□□□□□ -1.18
PARP1-205ENST00000468608 HSPA5P11021 654 aaKnown RBP7.69□□□□□ -1.18
PARP1-205ENST00000468608 NUTM2GQ5VZR2 741 aa7.69□□□□□ -1.18
PARP1-205ENST00000468608 SBNO1A3KN83 1393 aa7.69□□□□□ -1.18
PARP1-205ENST00000468608 POLR3AO14802 1390 aaPredicted RBP7.69□□□□□ -1.18
PARP1-205ENST00000468608 ATP7BP35670 1465 aa7.68□□□□□ -1.18
PARP1-205ENST00000468608 TULP4Q9NRJ4 1543 aa7.68□□□□□ -1.18
PARP1-205ENST00000468608 FAM83GA6ND36 823 aa7.68□□□□□ -1.18
PARP1-205ENST00000468608 TIE1P35590 1138 aa7.68□□□□□ -1.18
PARP1-205ENST00000468608 CLCN6P51797 869 aa7.68□□□□□ -1.18
PARP1-205ENST00000468608 PUS7Q96PZ0 661 aaKnown RBP7.68□□□□□ -1.18
PARP1-205ENST00000468608 EIF3AQ14152 1382 aaKnown RBP7.68□□□□□ -1.18
PARP1-205ENST00000468608 USP47Q96K76 1375 aa7.68□□□□□ -1.18
PARP1-205ENST00000468608 SBNO2Q9Y2G9 1366 aa7.68□□□□□ -1.18
PARP1-205ENST00000468608 PPIP5K1Q6PFW1 1433 aa7.68□□□□□ -1.18
PARP1-205ENST00000468608 ADGRB2O60241 1585 aa7.67□□□□□ -1.18
PARP1-205ENST00000468608 USP32Q8NFA0 1604 aa7.67□□□□□ -1.18
PARP1-205ENST00000468608 PPP1R37O75864 691 aa7.67□□□□□ -1.18
PARP1-205ENST00000468608 TMC1Q8TDI8 760 aa7.67□□□□□ -1.18
PARP1-205ENST00000468608 GJD4Q96KN9 370 aaPredicted RBP7.67□□□□□ -1.18
PARP1-205ENST00000468608 WDR70Q9NW82 654 aa7.67□□□□□ -1.18
PARP1-205ENST00000468608 TRPC6Q9Y210 931 aa7.67□□□□□ -1.18
PARP1-205ENST00000468608 FMN2Q9NZ56 1722 aa7.66□□□□□ -1.18
PARP1-205ENST00000468608 EIF4G2P78344 907 aaKnown RBP eCLIP7.66□□□□□ -1.18
PARP1-205ENST00000468608 TMF1P82094 1093 aa7.66□□□□□ -1.18
PARP1-205ENST00000468608 MKRN3Q13064 507 aaKnown RBP7.66□□□□□ -1.18
PARP1-205ENST00000468608 UNC5CLQ8IV45 518 aa7.66□□□□□ -1.18
PARP1-205ENST00000468608 ABTB2Q8N961 1025 aa7.66□□□□□ -1.18
PARP1-205ENST00000468608 SSH2Q76I76 1423 aa7.66□□□□□ -1.18
PARP1-205ENST00000468608 ARHGEF28Q8N1W1 1705 aaKnown RBP7.66□□□□□ -1.18
PARP1-205ENST00000468608 RGPD8O14715 1765 aaPredicted RBP7.66□□□□□ -1.18
PARP1-205ENST00000468608 HAX1O00165 279 aa7.65□□□□□ -1.18
PARP1-205ENST00000468608 RGS12O14924 1447 aa7.65□□□□□ -1.18
PARP1-205ENST00000468608 CPSF1Q10570 1443 aaKnown RBP7.65□□□□□ -1.18
PARP1-205ENST00000468608 TNS3Q68CZ2 1445 aa7.65□□□□□ -1.18
PARP1-205ENST00000468608 TTC21BQ7Z4L5 1316 aa7.65□□□□□ -1.18
PARP1-205ENST00000468608 BCL9LQ86UU0 1499 aa7.65□□□□□ -1.18
PARP1-205ENST00000468608 CARD14Q9BXL6 1004 aa7.65□□□□□ -1.18
PARP1-205ENST00000468608 COL22A1Q8NFW1 1626 aaPredicted RBP7.64□□□□□ -1.19
PARP1-205ENST00000468608 ATRNO75882 1429 aa7.64□□□□□ -1.19
PARP1-205ENST00000468608 ATAD2Q6PL18 1390 aa7.64□□□□□ -1.19
PARP1-205ENST00000468608 TTLL13PA6NNM8 815 aa7.64□□□□□ -1.19
PARP1-205ENST00000468608 ZC3H6P61129 1189 aaKnown RBP7.64□□□□□ -1.19
PARP1-205ENST00000468608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.64□□□□□ -1.19
PARP1-205ENST00000468608 CD163L1Q9NR16 1453 aa7.63□□□□□ -1.19
PARP1-205ENST00000468608 ARHGEF10O15013 1369 aa7.63□□□□□ -1.19
PARP1-205ENST00000468608 GCP02774 474 aa7.63□□□□□ -1.19
PARP1-205ENST00000468608 FBLN1P23142 703 aa7.63□□□□□ -1.19
PARP1-205ENST00000468608 CHRNA2Q15822 529 aa7.63□□□□□ -1.19
PARP1-205ENST00000468608 NLRP13Q86W25 1043 aa7.63□□□□□ -1.19
PARP1-205ENST00000468608 NME9Q86XW9 330 aa7.63□□□□□ -1.19
PARP1-205ENST00000468608 CCDC125Q86Z20 511 aa7.63□□□□□ -1.19
PARP1-205ENST00000468608 MS4A4AQ96JQ5 239 aa7.63□□□□□ -1.19
PARP1-205ENST00000468608 USP6P35125 1406 aa7.62□□□□□ -1.19
PARP1-205ENST00000468608 KTN1Q86UP2 1357 aaKnown RBP7.62□□□□□ -1.19
PARP1-205ENST00000468608 HDGFL2Q7Z4V5 671 aaPredicted RBP7.62□□□□□ -1.19
PARP1-205ENST00000468608 BMP2KQ9NSY1 1161 aaPredicted RBP7.62□□□□□ -1.19
PARP1-205ENST00000468608 CCDC9Q9Y3X0 531 aaKnown RBP7.62□□□□□ -1.19
PARP1-205ENST00000468608 KIF1AQ12756 1690 aa7.61□□□□□ -1.19
PARP1-205ENST00000468608 USP19O94966 1318 aa7.61□□□□□ -1.19
PARP1-205ENST00000468608 FYB1O15117 783 aa7.61□□□□□ -1.19
PARP1-205ENST00000468608 GALR2O43603 387 aaPredicted RBP7.61□□□□□ -1.19
PARP1-205ENST00000468608 ONECUT3O60422 494 aaPredicted RBP7.61□□□□□ -1.19
PARP1-205ENST00000468608 VPS72Q15906 364 aa7.61□□□□□ -1.19
PARP1-205ENST00000468608 SEPT12Q8IYM1 358 aa7.61□□□□□ -1.19
PARP1-205ENST00000468608 POLR3GLQ9BT43 218 aa7.61□□□□□ -1.19
PARP1-205ENST00000468608 TERF2IPQ9NYB0 399 aa7.61□□□□□ -1.19
PARP1-205ENST00000468608 SLIT2O94813 1529 aa7.61□□□□□ -1.19
PARP1-205ENST00000468608 MARF1Q9Y4F3 1742 aaKnown RBP7.61□□□□□ -1.19
PARP1-205ENST00000468608 A0A1W2PP64 1363 aa7.6□□□□□ -1.19
PARP1-205ENST00000468608 BRD4O60885 1362 aaPredicted RBP7.6□□□□□ -1.19
PARP1-205ENST00000468608 PRKCSHP14314 528 aaPredicted RBP7.6□□□□□ -1.19
PARP1-205ENST00000468608 TPRNQ4KMQ1 711 aa7.6□□□□□ -1.19
PARP1-205ENST00000468608 CDCA8Q53HL2 280 aa7.6□□□□□ -1.19
PARP1-205ENST00000468608 ARHGEF25Q86VW2 580 aa7.6□□□□□ -1.19
PARP1-205ENST00000468608 PANK3Q9H999 370 aa7.6□□□□□ -1.19
PARP1-205ENST00000468608 BTG4Q9NY30 223 aa7.6□□□□□ -1.19
PARP1-205ENST00000468608 AXIN2Q9Y2T1 843 aa7.6□□□□□ -1.19
PARP1-205ENST00000468608 QRICH2Q9H0J4 1663 aa7.6□□□□□ -1.19
PARP1-205ENST00000468608 KIAA0232Q92628 1395 aa7.59□□□□□ -1.19
PARP1-205ENST00000468608 TTC21AQ8NDW8 1320 aa7.59□□□□□ -1.19
PARP1-205ENST00000468608 EVX2Q03828 476 aa7.59□□□□□ -1.19
PARP1-205ENST00000468608 PRDM11Q9NQV5 511 aa7.59□□□□□ -1.19
PARP1-205ENST00000468608 USP31Q70CQ4 1352 aa7.59□□□□□ -1.2
PARP1-205ENST00000468608 KIF7Q2M1P5 1343 aa7.58□□□□□ -1.2
PARP1-205ENST00000468608 A0A0G2JS52 829 aa7.58□□□□□ -1.2
PARP1-205ENST00000468608 ZBTB7CA1YPR0 619 aa7.58□□□□□ -1.2
PARP1-205ENST00000468608 MYT1Q01538 1121 aa7.58□□□□□ -1.2
PARP1-205ENST00000468608 SF3B2Q13435 895 aaKnown RBP7.58□□□□□ -1.2
PARP1-205ENST00000468608 KRT27Q7Z3Y8 459 aa7.58□□□□□ -1.2
PARP1-205ENST00000468608 KCNV2Q8TDN2 545 aa7.58□□□□□ -1.2
PARP1-205ENST00000468608 GGNBP2Q9H3C7 697 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms